# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_50 - 265 Mg_chelatase PF01078.16 207 0.00036 12.4 0.0 1 1 6.8e-06 0.0006 11.7 0.0 23 42 98 117 84 147 0.91 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_11 - 228 UPF0020 PF01170.13 180 1.3e-05 17.6 0.0 1 2 0.00033 0.029 6.6 0.0 103 121 17 35 4 88 0.71 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 228 UPF0020 PF01170.13 180 1.3e-05 17.6 0.0 2 2 6.2e-05 0.0054 9.0 0.0 28 54 163 189 158 221 0.67 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_50 - 265 IstB_IS21 PF01695.12 178 3.8e-75 243.9 0.3 1 1 8.4e-77 7.4e-75 243.0 0.0 1 177 51 227 51 228 0.99 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_17 - 211 MipZ PF09140.6 261 5.4e-09 28.2 0.2 1 3 7.2e-07 6.3e-05 14.8 0.1 5 51 7 53 3 59 0.89 # 10101 # 10733 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.466 1_17 - 211 MipZ PF09140.6 261 5.4e-09 28.2 0.2 2 3 1.2e-05 0.0011 10.8 0.0 88 135 69 116 58 151 0.82 # 10101 # 10733 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.466 1_17 - 211 MipZ PF09140.6 261 5.4e-09 28.2 0.2 3 3 0.066 5.8 -1.4 0.0 206 237 161 193 137 202 0.76 # 10101 # 10733 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.466 1_3 - 176 SSB PF00436.20 104 5.4e-41 131.5 0.3 1 1 7.9e-43 7e-41 131.1 0.3 1 101 6 109 6 112 0.96 # 1187 # 1714 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.597 1_50 - 265 AAA_22 PF13401.1 131 2.8e-07 23.5 0.1 1 2 3.5e-05 0.0015 11.4 0.0 5 24 98 117 94 137 0.83 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_22 PF13401.1 131 2.8e-07 23.5 0.1 2 2 9.2e-05 0.004 10.0 0.0 77 121 147 195 116 203 0.72 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_76 - 524 AAA_22 PF13401.1 131 0.0018 11.2 1.2 1 2 0.054 2.4 1.1 0.4 38 88 30 79 10 99 0.74 # 60994 # 62565 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.564 1_76 - 524 AAA_22 PF13401.1 131 0.0018 11.2 1.2 2 2 0.00056 0.024 7.5 0.0 12 85 266 351 264 413 0.74 # 60994 # 62565 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.564 1_50 - 265 AAA_3 PF07726.6 131 0.0005 12.4 0.0 1 1 9.9e-06 0.00087 11.6 0.0 2 74 100 170 99 196 0.72 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_11 - 228 N6_N4_Mtase PF01555.13 231 1e-36 119.2 0.0 1 2 1.9e-15 1.6e-13 43.3 0.0 1 114 21 124 21 141 0.88 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 228 N6_N4_Mtase PF01555.13 231 1e-36 119.2 0.0 2 2 5.6e-25 5e-23 74.5 0.0 169 228 141 200 127 203 0.90 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_50 - 265 AAA_17 PF13207.1 121 1.6e-05 18.4 0.1 1 1 9.4e-07 8.3e-05 16.2 0.1 2 28 100 129 99 239 0.71 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_22 - 713 AAA_21 PF13304.1 303 1.3e-08 27.8 0.2 1 2 6.8e-06 0.0006 12.5 0.0 7 71 29 106 27 212 0.63 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 713 AAA_21 PF13304.1 303 1.3e-08 27.8 0.2 2 2 6.5e-06 0.00057 12.6 0.0 219 298 386 487 301 489 0.75 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 265 ArsA_ATPase PF02374.10 305 5e-05 15.1 0.0 1 1 1.7e-06 7.6e-05 14.5 0.0 6 38 102 134 98 175 0.91 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_17 - 211 ArsA_ATPase PF02374.10 305 0.00025 12.8 1.2 1 2 1.5e-05 0.00067 11.4 0.8 5 32 7 34 1 48 0.85 # 10101 # 10733 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.466 1_17 - 211 ArsA_ATPase PF02374.10 305 0.00025 12.8 1.2 2 2 0.08 3.5 -0.8 0.0 108 134 57 87 35 89 0.66 # 10101 # 10733 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.466 1_50 - 265 PhoH PF02562.11 205 1.6e-06 20.2 0.0 1 1 4e-08 3.5e-06 19.1 0.0 15 47 93 125 80 185 0.90 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AFG1_ATPase PF03969.11 362 3.8e-07 21.9 0.0 1 1 6.1e-09 5.4e-07 21.4 0.0 64 228 99 259 68 263 0.78 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_22 - 713 SMC_N PF02463.14 220 0.00018 13.5 0.0 1 2 0.00049 0.043 5.7 0.0 5 45 3 42 1 50 0.78 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 713 SMC_N PF02463.14 220 0.00018 13.5 0.0 2 2 0.0005 0.044 5.7 0.0 135 186 243 470 100 500 0.73 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 265 Arch_ATPase PF01637.13 234 0.00014 14.3 0.0 1 1 9.1e-06 0.0008 11.8 0.0 18 119 95 190 81 196 0.62 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_16 PF13191.1 185 6.8e-06 18.9 0.3 1 2 0.08 7 -0.7 0.0 142 166 42 79 6 96 0.57 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_16 PF13191.1 185 6.8e-06 18.9 0.3 2 2 4.1e-07 3.6e-05 16.5 0.2 23 62 96 135 81 196 0.83 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_22 - 713 AAA_23 PF13476.1 202 9.5e-09 28.5 0.1 1 1 3.4e-10 3e-08 26.9 0.1 2 177 3 271 2 351 0.67 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 265 AAA_18 PF13238.1 129 0.0002 14.4 0.2 1 1 5.7e-06 0.0005 13.1 0.2 1 20 100 119 100 169 0.70 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_22 - 713 AAA_13 PF13166.1 712 4.9e-27 87.3 0.0 1 3 1.5e-11 6.7e-10 30.7 0.0 15 129 20 151 10 169 0.76 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 713 AAA_13 PF13166.1 712 4.9e-27 87.3 0.0 2 3 6.8e-06 0.0003 12.0 0.0 240 390 195 383 185 393 0.61 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 713 AAA_13 PF13166.1 712 4.9e-27 87.3 0.0 3 3 1.2e-14 5.3e-13 40.9 0.0 497 572 417 489 377 510 0.80 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_23 - 513 AAA_13 PF13166.1 712 0.00046 11.4 0.1 1 1 1e-05 0.00046 11.4 0.1 362 438 6 82 1 102 0.91 # 16353 # 17891 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_17 - 211 CbiA PF01656.18 195 5.6e-16 51.2 0.1 1 1 3.1e-17 1.3e-15 50.0 0.1 3 178 7 164 5 180 0.75 # 10101 # 10733 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.466 1_50 - 265 CbiA PF01656.18 195 9.4e-06 17.9 0.0 1 1 2.8e-07 1.2e-05 17.4 0.0 9 63 107 177 100 251 0.64 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 KaiC PF06745.8 227 0.00084 11.2 0.0 1 2 3.5e-05 0.0031 9.3 0.0 18 63 96 140 78 168 0.80 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 KaiC PF06745.8 227 0.00084 11.2 0.0 2 2 0.025 2.2 -0.0 0.0 105 147 147 184 141 200 0.62 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_14 PF13173.1 128 4.9e-08 25.7 0.0 1 1 2.1e-09 1.9e-07 23.8 0.0 3 96 98 197 96 206 0.68 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA PF00004.24 132 2.8e-09 30.0 0.0 1 1 1.7e-10 7.5e-09 28.6 0.0 1 74 100 174 100 199 0.78 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_17 - 211 AAA PF00004.24 132 0.00073 12.5 0.0 1 1 2.9e-05 0.0013 11.7 0.0 8 38 13 55 9 104 0.73 # 10101 # 10733 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.466 1_50 - 265 Bac_DnaA PF00308.13 219 2.2e-12 39.8 0.0 1 1 3.8e-14 3.4e-12 39.2 0.0 36 139 99 199 71 208 0.88 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 Sigma54_activat PF00158.21 168 0.0002 13.6 0.1 1 2 0.00012 0.011 8.0 0.0 19 47 94 122 82 145 0.75 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 Sigma54_activat PF00158.21 168 0.0002 13.6 0.1 2 2 0.0037 0.33 3.1 0.0 96 120 161 186 153 192 0.70 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_70 - 597 TraG-D_C PF12696.2 128 2.1e-07 23.6 0.1 1 1 4.9e-09 4.3e-07 22.6 0.1 1 88 270 357 270 386 0.83 # 53919 # 55709 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=11-12bp;gc_cont=0.497 1_17 - 211 AAA_31 PF13614.1 157 8e-07 21.8 0.0 1 2 1.7e-06 7.4e-05 15.5 0.0 2 44 4 46 4 61 0.86 # 10101 # 10733 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.466 1_17 - 211 AAA_31 PF13614.1 157 8e-07 21.8 0.0 2 2 0.0046 0.2 4.3 0.0 112 151 72 112 57 117 0.82 # 10101 # 10733 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.466 1_50 - 265 AAA_31 PF13614.1 157 0.00012 14.8 0.1 1 1 8.5e-06 0.00037 13.2 0.1 10 39 106 135 103 195 0.88 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 NTPase_1 PF03266.10 168 0.00043 12.7 0.0 1 2 0.00041 0.036 6.5 0.0 2 19 100 117 99 129 0.77 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 NTPase_1 PF03266.10 168 0.00043 12.7 0.0 2 2 0.0022 0.19 4.1 0.0 85 107 149 170 134 197 0.75 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_33 PF13671.1 143 9.6e-05 15.0 0.0 1 1 2.2e-06 0.0002 14.0 0.0 2 44 100 147 100 192 0.75 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 KTI12 PF08433.5 270 0.00023 13.1 0.0 1 1 4.3e-06 0.00038 12.4 0.0 4 69 100 157 99 198 0.76 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_11 - 228 Methyltransf_26 PF13659.1 117 7.7e-12 38.1 0.1 1 2 2.1e-07 1.8e-05 17.5 0.0 57 114 7 71 2 74 0.69 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 228 Methyltransf_26 PF13659.1 117 7.7e-12 38.1 0.1 2 2 9.7e-08 8.5e-06 18.6 0.0 4 45 167 207 164 223 0.82 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_50 - 265 AAA_30 PF13604.1 196 0.00027 13.2 0.1 1 1 1.6e-05 0.0014 10.9 0.1 17 60 96 139 86 196 0.79 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_35 PF14516.1 331 0.00025 12.4 0.1 1 3 0.0082 0.72 1.1 0.1 239 272 12 42 5 56 0.79 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_35 PF14516.1 331 0.00025 12.4 0.1 2 3 0.0016 0.14 3.4 0.0 26 76 92 142 79 150 0.77 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_35 PF14516.1 331 0.00025 12.4 0.1 3 3 0.001 0.089 4.0 0.0 122 161 153 192 142 199 0.88 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_22 - 713 ABC_tran PF00005.22 137 2.7e-07 23.7 0.5 1 2 0.00035 0.03 7.3 1.2 19 37 29 47 16 174 0.64 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 713 ABC_tran PF00005.22 137 2.7e-07 23.7 0.5 2 2 1.5e-05 0.0014 11.7 0.0 87 136 398 452 283 453 0.74 # 13899 # 16037 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_11 - 228 Cons_hypoth95 PF03602.10 183 4.5e-06 18.9 0.0 1 2 0.00016 0.014 7.5 0.0 112 168 18 76 8 83 0.68 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 228 Cons_hypoth95 PF03602.10 183 4.5e-06 18.9 0.0 2 2 4e-05 0.0035 9.4 0.0 41 62 162 183 145 218 0.78 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_50 - 265 RuvB_N PF05496.7 234 1.6e-05 16.7 0.2 1 1 4.2e-07 3.7e-05 15.5 0.2 49 119 96 176 89 187 0.65 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_19 PF13245.1 76 1.3e-07 24.1 0.1 1 1 4.7e-09 4.1e-07 22.5 0.1 13 49 100 132 87 144 0.85 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_10 PF12846.2 304 0.00019 13.6 0.0 1 1 3.8e-06 0.00033 12.8 0.0 2 36 98 132 97 200 0.86 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_23 - 513 DUF3584 PF12128.3 1201 0.0047 6.9 5.4 1 2 7.5e-06 0.00066 9.8 1.7 304 377 12 86 5 100 0.87 # 16353 # 17891 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_23 - 513 DUF3584 PF12128.3 1201 0.0047 6.9 5.4 2 2 0.083 7.3 -3.7 0.1 278 304 375 401 353 418 0.49 # 16353 # 17891 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_50 - 265 DEAD PF00270.24 169 0.00085 11.6 0.0 1 1 2.4e-05 0.0021 10.3 0.0 13 102 96 197 83 219 0.67 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_74 - 283 Methyltransf_27 PF13708.1 194 2.3e-67 219.0 0.0 1 1 3.6e-69 3.1e-67 218.5 0.0 2 194 85 278 84 278 0.96 # 59443 # 60291 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_50 - 265 Sigma54_activ_2 PF14532.1 138 0.00048 12.9 0.0 1 1 1.5e-05 0.0013 11.5 0.0 17 110 93 200 82 228 0.64 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_11 - 228 MethyltransfD12 PF02086.10 260 0.00068 11.8 0.0 1 2 0.034 3 -0.1 0.0 175 188 18 31 10 89 0.79 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 228 MethyltransfD12 PF02086.10 260 0.00068 11.8 0.0 2 2 4e-05 0.0035 9.5 0.0 20 46 163 189 148 197 0.78 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_50 - 265 ArgK PF03308.11 267 9.1e-05 14.0 0.0 1 1 2.1e-06 0.00018 13.0 0.0 27 66 95 134 81 136 0.85 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_24 PF13479.1 213 0.00059 12.1 0.0 1 1 1.2e-05 0.0011 11.3 0.0 5 23 99 117 95 159 0.86 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 NACHT PF05729.7 166 6.5e-05 15.3 0.3 1 2 1.4e-05 0.0012 11.2 0.1 3 26 100 123 98 133 0.84 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 NACHT PF05729.7 166 6.5e-05 15.3 0.3 2 2 0.0091 0.8 2.0 0.0 56 128 135 198 124 215 0.73 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_25 PF13481.1 194 1.2e-07 24.0 0.1 1 1 2.2e-09 2e-07 23.3 0.1 24 66 83 132 62 222 0.71 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_11 - 228 Methyltransf_15 PF09445.5 164 0.00052 12.3 0.0 1 2 0.029 2.6 0.3 0.0 53 79 4 29 2 33 0.91 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 228 Methyltransf_15 PF09445.5 164 0.00052 12.3 0.0 2 2 4.2e-05 0.0037 9.5 0.0 3 31 166 194 164 209 0.86 # 5468 # 6151 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_50 - 265 AAA_28 PF13521.1 163 3.5e-05 16.5 1.1 1 2 7e-06 0.00062 12.5 0.1 2 44 100 147 99 159 0.68 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_28 PF13521.1 163 3.5e-05 16.5 1.1 2 2 0.0036 0.32 3.7 0.0 95 150 144 193 131 203 0.76 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_50 - 265 AAA_5 PF07728.9 139 5.1e-05 15.7 1.6 1 1 1.8e-06 0.00016 14.2 0.6 1 19 99 117 99 191 0.86 # 38751 # 39545 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/39e6bacf-4f69-4e16-89c2-054895f2e547 # Target file: checkm_output/bins/pn30/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn30/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/39e6bacf-4f69-4e16-89c2-054895f2e547 checkm_output/bins/pn30/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:13:10 2020 # [ok]