# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_40 - 227 UPF0020 PF01170.13 180 5.7e-06 18.9 0.0 1 2 0.00014 0.014 7.8 0.0 103 119 17 33 4 86 0.74 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_40 - 227 UPF0020 PF01170.13 180 5.7e-06 18.9 0.0 2 2 5.5e-05 0.0056 9.2 0.0 28 54 163 189 158 219 0.75 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_73 - 74 cobW PF02492.14 178 0.00057 12.3 0.0 1 1 5.5e-06 0.00057 12.3 0.0 3 23 8 31 6 72 0.74 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_34 - 402 MipZ PF09140.6 261 6.2e-06 18.3 0.0 1 2 0.0027 0.27 3.1 0.0 3 50 111 163 109 193 0.73 # 33722 # 34927 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_34 - 402 MipZ PF09140.6 261 6.2e-06 18.3 0.0 2 2 2.8e-06 0.00029 12.9 0.0 87 136 233 282 220 305 0.87 # 33722 # 34927 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_50 - 185 SSB PF00436.20 104 4.8e-43 138.3 0.5 1 1 5.7e-45 5.8e-43 138.0 0.5 1 100 6 109 6 113 0.95 # 44326 # 44880 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.598 1_92 - 1608 UvrD_C_2 PF13538.1 104 1.3e-08 27.9 0.1 1 1 4.5e-10 4.6e-08 26.1 0.1 3 103 1345 1450 1343 1451 0.77 # 78502 # 83325 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_78 - 864 DUF87 PF01935.12 229 3.1e-05 16.8 0.0 1 1 8.9e-07 9.1e-05 15.3 0.0 26 213 477 655 474 670 0.64 # 61476 # 64067 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_73 - 74 NB-ARC PF00931.17 287 0.00059 11.6 0.1 1 1 7.2e-06 0.00073 11.3 0.1 22 41 8 27 2 37 0.87 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 Septin PF00735.13 281 9.8e-05 14.4 0.0 1 1 9.8e-07 0.0001 14.3 0.0 4 29 5 30 3 61 0.76 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 AAA_22 PF13401.1 131 7.8e-05 15.8 0.2 1 1 9.3e-07 9.5e-05 15.5 0.2 7 26 8 27 3 59 0.85 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 ATP_bind_1 PF03029.12 238 0.00079 11.9 0.1 1 1 9.5e-06 0.00097 11.6 0.1 1 23 10 32 10 39 0.88 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 SRP54 PF00448.17 196 5e-06 19.0 0.0 1 1 4.9e-08 5e-06 19.0 0.0 3 28 7 32 5 56 0.85 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_40 - 227 N6_N4_Mtase PF01555.13 231 3.1e-37 121.2 0.0 1 2 8.5e-16 8.6e-14 44.4 0.0 1 114 21 124 21 132 0.91 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_40 - 227 N6_N4_Mtase PF01555.13 231 3.1e-37 121.2 0.0 2 2 4.2e-25 4.3e-23 74.9 0.0 169 227 141 199 129 204 0.91 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_73 - 74 Miro PF08477.8 119 1.6e-05 18.3 0.0 1 1 1.6e-07 1.6e-05 18.3 0.0 1 21 7 27 7 61 0.84 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 MobB PF03205.9 140 1.4e-05 17.7 0.0 1 1 3e-07 1.5e-05 17.6 0.0 3 27 8 32 6 52 0.83 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_91 - 750 MobB PF03205.9 140 0.00016 14.3 0.1 1 1 9e-06 0.00046 12.9 0.1 6 33 191 218 187 224 0.86 # 76253 # 78502 # 1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_73 - 74 T2SE PF00437.15 272 9.8e-06 17.5 0.0 1 1 9.6e-08 9.8e-06 17.5 0.0 127 152 4 29 2 56 0.87 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 G-alpha PF00503.15 389 4.7e-05 15.1 0.0 1 1 4.6e-07 4.7e-05 15.1 0.0 56 87 3 34 1 60 0.82 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 Zeta_toxin PF06414.7 201 1.5e-05 17.1 0.1 1 1 1.5e-07 1.5e-05 17.1 0.1 14 39 3 28 1 61 0.89 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_91 - 750 Arch_ATPase PF01637.13 234 0.00018 14.1 0.0 1 1 3.5e-06 0.00035 13.2 0.0 27 83 192 242 182 316 0.83 # 76253 # 78502 # 1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_91 - 750 AAA_16 PF13191.1 185 2.8e-05 17.1 0.0 1 1 2.7e-06 9.2e-05 15.4 0.0 22 88 183 251 179 320 0.63 # 76253 # 78502 # 1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_73 - 74 AAA_16 PF13191.1 185 3.9e-05 16.6 0.0 1 1 1.2e-06 4e-05 16.6 0.0 23 53 4 34 1 64 0.77 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_78 - 864 AAA_16 PF13191.1 185 0.00015 14.7 0.0 1 1 2e-05 0.00069 12.6 0.0 26 56 476 507 461 595 0.86 # 61476 # 64067 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_73 - 74 AAA_23 PF13476.1 202 0.00079 12.7 0.6 1 1 1.1e-05 0.0011 12.2 0.5 23 36 9 22 4 34 0.89 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 AAA_18 PF13238.1 129 0.0007 12.9 0.0 1 1 7.4e-06 0.00076 12.8 0.0 1 42 8 48 8 65 0.72 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_34 - 402 CbiA PF01656.18 195 2.4e-18 59.1 0.0 1 1 4.9e-20 5e-18 58.1 0.0 1 141 111 291 111 328 0.75 # 33722 # 34927 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_73 - 74 AAA_29 PF13555.1 62 1.7e-05 17.3 0.1 1 1 2.1e-07 2.1e-05 17.0 0.1 24 51 6 33 1 39 0.84 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 AAA PF00004.24 132 0.00043 13.4 0.0 1 1 4.9e-06 0.0005 13.2 0.0 1 51 8 55 8 60 0.85 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 Sigma54_activat PF00158.21 168 0.00045 12.7 0.0 1 1 4.4e-06 0.00045 12.7 0.0 21 42 4 25 1 57 0.81 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_61 - 278 N6_Mtase PF02384.11 311 2.9e-12 39.2 0.0 1 1 4.1e-14 4.2e-12 38.6 0.0 25 118 139 238 130 269 0.83 # 51150 # 51983 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.544 1_91 - 750 TraG-D_C PF12696.2 128 6.7e-21 67.4 0.0 1 1 1.3e-22 1.3e-20 66.5 0.0 1 127 420 542 420 543 0.85 # 76253 # 78502 # 1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_34 - 402 AAA_31 PF13614.1 157 0.00058 12.8 0.0 1 1 3.1e-05 0.0032 10.3 0.0 108 147 235 273 231 279 0.86 # 33722 # 34927 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_73 - 74 AAA_33 PF13671.1 143 0.00055 12.8 0.0 1 1 6.4e-06 0.00065 12.5 0.0 2 49 8 54 8 65 0.65 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_40 - 227 Methyltransf_26 PF13659.1 117 5.5e-11 35.5 0.0 1 2 7.5e-07 3.8e-05 16.7 0.0 55 112 5 69 2 74 0.70 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_40 - 227 Methyltransf_26 PF13659.1 117 5.5e-11 35.5 0.0 2 2 6.8e-07 3.5e-05 16.8 0.0 4 34 167 196 164 221 0.81 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_61 - 278 Methyltransf_26 PF13659.1 117 0.00011 15.2 0.1 1 1 3.9e-06 0.0002 14.3 0.1 3 63 171 238 170 276 0.78 # 51150 # 51983 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.544 1_92 - 1608 AAA_30 PF13604.1 196 8.8e-44 142.3 10.9 1 2 0.00012 0.0059 9.1 1.4 9 127 434 546 432 565 0.77 # 78502 # 83325 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_92 - 1608 AAA_30 PF13604.1 196 8.8e-44 142.3 10.9 2 2 1.4e-43 7e-42 136.1 2.5 2 187 971 1159 970 1163 0.92 # 78502 # 83325 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_73 - 74 AAA_30 PF13604.1 196 6.1e-05 15.6 0.3 1 1 1.2e-06 6.3e-05 15.5 0.3 17 44 4 31 1 60 0.81 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 FtsK_SpoIIIE PF01580.13 205 9.4e-05 14.9 0.0 1 1 9.2e-07 9.4e-05 14.9 0.0 40 56 7 23 1 55 0.89 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 ABC_tran PF00005.22 137 5.4e-05 16.4 0.0 1 1 1.1e-06 5.5e-05 16.4 0.0 13 35 7 29 3 60 0.84 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_78 - 864 ABC_tran PF00005.22 137 0.00089 12.5 0.0 1 1 4.1e-05 0.0021 11.3 0.0 13 96 476 599 472 614 0.60 # 61476 # 64067 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_40 - 227 Cons_hypoth95 PF03602.10 183 3.5e-05 16.2 0.0 1 2 0.00061 0.062 5.6 0.0 113 127 19 33 12 80 0.73 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_40 - 227 Cons_hypoth95 PF03602.10 183 3.5e-05 16.2 0.0 2 2 6.8e-05 0.0069 8.7 0.0 41 61 162 182 145 212 0.83 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_92 - 1608 AAA_19 PF13245.1 76 1.2e-07 24.4 4.9 1 2 0.037 1.9 1.3 0.0 20 59 450 489 434 499 0.76 # 78502 # 83325 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_92 - 1608 AAA_19 PF13245.1 76 1.2e-07 24.4 4.9 2 2 1.8e-08 9e-07 21.6 0.3 8 76 984 1049 977 1049 0.78 # 78502 # 83325 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_73 - 74 AAA_19 PF13245.1 76 0.00051 12.8 0.2 1 1 1.3e-05 0.00064 12.4 0.2 12 35 8 30 3 71 0.73 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_78 - 864 AAA_10 PF12846.2 304 4.4e-45 147.3 0.0 1 1 2.8e-46 9.6e-45 146.2 0.0 1 291 474 760 474 767 0.89 # 61476 # 64067 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_91 - 750 AAA_10 PF12846.2 304 5e-16 51.9 0.0 1 1 3.4e-16 1.1e-14 47.4 0.0 3 302 187 501 186 503 0.76 # 76253 # 78502 # 1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_73 - 74 AAA_10 PF12846.2 304 0.00013 14.3 0.1 1 1 6.7e-06 0.00023 13.6 0.1 3 26 7 30 5 36 0.85 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 ResIII PF04851.10 184 0.00046 13.0 0.0 1 1 5.2e-06 0.00054 12.8 0.0 25 49 5 28 2 42 0.83 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_20 - 179 PPK2 PF03976.9 229 1.5e-05 17.3 0.2 1 1 2e-07 2e-05 16.9 0.2 101 165 95 159 83 172 0.92 # 21361 # 21897 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 1_73 - 74 PduV-EutP PF10662.4 143 0.00034 13.1 0.0 1 1 3.8e-06 0.00039 12.9 0.0 3 20 7 25 5 43 0.80 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 DEAD PF00270.24 169 0.00043 12.7 0.0 1 1 4.2e-06 0.00043 12.7 0.0 16 33 7 24 2 64 0.84 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_91 - 750 TrwB_AAD_bind PF10412.4 386 5.2e-149 488.9 0.0 1 1 1.9e-150 6.5e-149 488.6 0.0 2 385 172 561 171 562 0.99 # 76253 # 78502 # 1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_73 - 74 TrwB_AAD_bind PF10412.4 386 2e-05 16.3 0.2 1 2 1.8e-05 0.00062 11.3 0.4 15 42 5 32 2 35 0.82 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 TrwB_AAD_bind PF10412.4 386 2e-05 16.3 0.2 2 2 0.0021 0.071 4.6 0.0 277 308 30 65 26 73 0.66 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_78 - 864 TrwB_AAD_bind PF10412.4 386 3.8e-05 15.3 0.0 1 1 2.2e-06 7.5e-05 14.4 0.0 16 71 475 536 470 545 0.79 # 61476 # 64067 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_92 - 1608 AAA_11 PF13086.1 236 0.00015 14.3 0.1 1 1 6.4e-06 0.00066 12.2 0.0 2 75 971 1041 970 1108 0.88 # 78502 # 83325 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_91 - 750 T4SS-DNA_transf PF02534.9 469 3.7e-13 41.7 0.0 1 1 9.6e-14 9.8e-12 37.0 0.0 141 390 272 505 228 556 0.76 # 76253 # 78502 # 1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_73 - 74 AAA_32 PF13654.1 509 0.00092 10.8 0.0 1 1 1e-05 0.001 10.6 0.0 28 55 3 30 1 38 0.81 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_40 - 227 MethyltransfD12 PF02086.10 260 0.00051 12.4 0.0 1 2 0.015 1.6 1.0 0.0 177 189 20 32 11 94 0.78 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_40 - 227 MethyltransfD12 PF02086.10 260 0.00051 12.4 0.0 2 2 4.7e-05 0.0048 9.2 0.0 20 46 163 189 148 197 0.77 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_91 - 750 GTP_EFTU PF00009.22 188 4.1e-05 16.0 0.0 1 2 5.5e-05 0.0028 10.0 0.0 2 28 184 210 183 231 0.90 # 76253 # 78502 # 1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_91 - 750 GTP_EFTU PF00009.22 188 4.1e-05 16.0 0.0 2 2 0.0055 0.28 3.5 0.0 51 85 335 367 312 375 0.89 # 76253 # 78502 # 1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_73 - 74 GTP_EFTU PF00009.22 188 0.00023 13.5 0.0 1 1 4.6e-06 0.00023 13.5 0.0 2 25 4 27 3 56 0.83 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 RNA_helicase PF00910.17 107 2.9e-05 17.2 0.0 1 1 3.3e-07 3.3e-05 17.0 0.0 1 53 8 59 8 66 0.85 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 AAA_24 PF13479.1 213 7.4e-06 18.6 0.0 1 1 8.7e-08 8.9e-06 18.3 0.0 2 37 4 37 3 50 0.83 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 Myosin_head PF00063.16 689 0.0012 9.8 0.0 1 1 1.2e-05 0.0012 9.8 0.0 88 117 8 37 1 61 0.74 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_73 - 74 NACHT PF05729.7 166 0.00067 12.3 0.0 1 1 8.4e-06 0.00086 11.9 0.0 3 22 8 27 7 43 0.80 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_40 - 227 Methyltransf_15 PF09445.5 164 0.00051 12.6 0.1 1 2 0.025 2.5 0.5 0.0 52 79 3 29 1 33 0.90 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_40 - 227 Methyltransf_15 PF09445.5 164 0.00051 12.6 0.1 2 2 3.8e-05 0.0039 9.7 0.0 3 33 166 196 164 204 0.88 # 38996 # 39676 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_73 - 74 AAA_5 PF07728.9 139 0.00047 12.8 0.1 1 1 7.7e-06 0.00079 12.1 0.1 1 32 7 38 7 46 0.81 # 59553 # 59774 # 1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/979906ec-fdfe-4be7-9541-516407480e4a # Target file: checkm_output/bins/pn188/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn188/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/979906ec-fdfe-4be7-9541-516407480e4a checkm_output/bins/pn188/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:12:55 2020 # [ok]