# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 293 Methyltransf_8 PF05148.10 219 0.00048 13.4 0.1 1 1 5e-06 0.00085 12.6 0.1 158 206 71 119 39 128 0.88 # 652 # 1530 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.378 1_80 - 254 UPF0020 PF01170.13 180 4.9e-05 16.6 0.0 1 1 1.3e-06 0.00022 14.5 0.0 14 126 86 185 76 221 0.75 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_63 - 332 cobW PF02492.14 178 3.8e-06 20.1 0.0 1 1 4.1e-08 7e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 Parvo_NS1 PF01057.12 272 0.0015 11.1 0.0 1 1 1.4e-05 0.0024 10.4 0.0 104 138 148 182 140 188 0.90 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_94 - 203 RrnaAD PF00398.15 262 2.3e-05 17.1 0.0 1 1 2.1e-07 3.6e-05 16.5 0.0 47 92 98 144 80 183 0.85 # 98768 # 99376 # 1 # ID=1_94;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.498 1_63 - 332 IstB_IS21 PF01695.12 178 4.7e-05 16.5 0.0 1 1 4.5e-07 7.6e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_30 - 418 MipZ PF09140.6 261 8.1e-12 38.4 0.1 1 2 1.4e-08 2.4e-06 20.4 0.1 2 39 116 156 115 170 0.78 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_30 - 418 MipZ PF09140.6 261 8.1e-12 38.4 0.1 2 2 5.4e-07 9.2e-05 15.2 0.0 77 126 236 287 213 297 0.75 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_30 - 418 YhjQ PF06564.7 244 0.0013 11.8 0.2 1 2 0.00059 0.1 5.6 0.1 6 41 119 157 115 170 0.78 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_30 - 418 YhjQ PF06564.7 244 0.0013 11.8 0.2 2 2 0.002 0.34 3.8 0.0 115 149 257 291 233 297 0.83 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_72 - 562 3HCDH_N PF02737.13 180 0.027 7.7 6.6 1 2 0.0086 1.5 2.1 2.8 1 30 100 129 100 133 0.93 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 3HCDH_N PF02737.13 180 0.027 7.7 6.6 2 2 0.0003 0.051 6.9 0.1 2 36 273 307 272 359 0.75 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 GIDA PF01134.17 392 4.5e-06 19.4 5.3 1 2 2.6e-08 4.5e-06 19.4 5.3 1 53 100 154 100 290 0.87 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 GIDA PF01134.17 392 4.5e-06 19.4 5.3 2 2 0.01 1.7 1.0 0.3 349 385 390 426 376 430 0.79 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_10 - 126 SSB PF00436.20 104 0.00087 12.8 0.1 1 2 3.3e-05 0.0057 10.2 0.1 2 83 8 87 7 94 0.74 # 9767 # 10144 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.368 1_10 - 126 SSB PF00436.20 104 0.00087 12.8 0.1 2 2 0.033 5.7 0.6 0.0 43 60 92 109 88 112 0.83 # 9767 # 10144 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.368 1_80 - 254 Methyltransf_18 PF12847.2 112 2.8e-06 21.6 0.0 1 1 3e-08 5.2e-06 20.7 0.0 3 107 102 198 100 203 0.78 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_12 - 595 UvrD_C_2 PF13538.1 104 1.5e-12 41.3 0.0 1 1 2e-14 3.4e-12 40.1 0.0 47 103 496 562 450 563 0.79 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_72 - 562 Pyr_redox_2 PF07992.9 201 1.2e-42 139.7 0.0 1 1 1.6e-44 2.7e-42 138.6 0.0 1 199 100 407 100 409 0.96 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_8 - 353 AAA_2 PF07724.9 171 8.8e-06 19.4 0.0 1 1 2.2e-07 1.9e-05 18.3 0.0 5 83 98 177 95 184 0.74 # 7613 # 8671 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.407 1_63 - 332 AAA_2 PF07724.9 171 9.7e-06 19.2 0.0 1 1 2.1e-07 1.8e-05 18.4 0.0 3 54 158 204 156 216 0.89 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 DUF87 PF01935.12 229 4.5e-06 20.3 0.0 1 1 9.7e-08 8.3e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_145 - 695 DUF87 PF01935.12 229 0.0003 14.3 0.0 1 1 8.1e-06 0.00069 13.1 0.0 25 68 200 242 189 278 0.89 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_80 - 254 MetW PF07021.7 193 0.00033 13.7 0.0 1 1 5.7e-06 0.00049 13.2 0.0 13 102 100 192 90 202 0.76 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_49 - 563 MetW PF07021.7 193 0.0011 12.0 0.0 1 1 2.1e-05 0.0018 11.3 0.0 17 83 422 486 408 498 0.84 # 56193 # 57881 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_63 - 332 AAA_22 PF13401.1 131 4.6e-07 23.7 0.0 1 1 1.2e-08 1e-06 22.6 0.0 3 54 157 202 153 241 0.74 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_145 - 695 AAA_22 PF13401.1 131 0.00028 14.7 0.1 1 2 7.6e-05 0.0065 10.3 0.1 5 24 199 218 198 295 0.71 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_145 - 695 AAA_22 PF13401.1 131 0.00028 14.7 0.1 2 2 0.043 3.7 1.4 0.0 89 121 505 534 458 544 0.72 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_80 - 254 Methyltransf_11 PF08241.7 95 0.00037 14.7 0.0 1 1 4.7e-06 0.0008 13.6 0.0 5 86 109 191 105 198 0.82 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_72 - 562 Trp_halogenase PF04820.9 454 0.0077 8.5 3.3 1 1 8.1e-05 0.014 7.6 3.3 1 47 100 143 100 151 0.76 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 NAD_binding_7 PF13241.1 103 6.6e-06 20.0 1.2 1 2 1.9e-05 0.0032 11.4 0.2 9 38 100 129 96 164 0.90 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 NAD_binding_7 PF13241.1 103 6.6e-06 20.0 1.2 2 2 0.00049 0.084 6.9 0.1 8 45 271 314 264 382 0.66 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_95 - 417 N6_N4_Mtase PF01555.13 231 3.5e-22 72.6 0.0 1 1 3.1e-24 5.3e-22 72.1 0.0 1 227 128 389 128 393 0.81 # 99547 # 100797 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 1_63 - 332 AAA_17 PF13207.1 121 0.00065 14.2 0.1 1 1 9.5e-06 0.0016 12.9 0.1 2 40 161 195 160 229 0.75 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 MobB PF03205.9 140 1.7e-05 18.2 1.8 1 1 1.5e-07 2.6e-05 17.6 0.3 2 39 160 196 159 201 0.83 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_30 - 418 ArsA_ATPase PF02374.10 305 2e-09 30.5 0.5 1 2 0.021 3.6 0.1 0.0 214 273 14 75 6 84 0.77 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_30 - 418 ArsA_ATPase PF02374.10 305 2e-09 30.5 0.5 2 2 2.4e-10 4.1e-08 26.2 0.1 8 136 122 269 115 274 0.80 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_12 - 595 PhoH PF02562.11 205 5.2e-07 22.7 0.5 1 1 1.8e-07 1.5e-05 17.9 0.5 6 177 5 246 2 258 0.76 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_63 - 332 PhoH PF02562.11 205 0.00052 12.9 0.0 1 1 1.1e-05 0.00096 12.1 0.0 14 45 153 184 143 210 0.79 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 AAA_7 PF12775.2 272 0.00017 14.4 0.0 1 1 2.3e-06 0.0004 13.2 0.0 25 64 150 189 139 209 0.86 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 T2SE PF00437.15 272 4.7e-52 170.1 0.1 1 1 3.2e-54 5.6e-52 169.9 0.1 3 271 10 311 8 312 0.94 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 Zeta_toxin PF06414.7 201 2.6e-06 20.3 0.0 1 1 2.7e-08 4.6e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_72 - 562 NAD_binding_8 PF13450.1 68 0.00012 15.8 1.2 1 1 6.9e-07 0.00012 15.8 1.2 1 35 103 136 103 155 0.91 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_102 - 795 TIGR02432 TIGR02432 189 0.00039 13.7 0.0 1 1 4.4e-06 0.00075 12.8 0.0 2 41 77 116 76 148 0.70 # 104763 # 107147 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.516 1_30 - 418 Fer4_NifH PF00142.13 273 0.00016 14.6 0.0 1 2 2.7e-06 0.00045 13.1 0.0 7 58 122 176 116 201 0.79 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_30 - 418 Fer4_NifH PF00142.13 273 0.00016 14.6 0.0 2 2 0.1 17 -1.9 0.0 30 65 324 358 321 391 0.61 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_63 - 332 Arch_ATPase PF01637.13 234 1.6e-05 18.4 0.0 1 1 1.6e-07 2.8e-05 17.6 0.0 15 68 155 205 149 226 0.87 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 AAA_16 PF13191.1 185 1.1e-06 22.3 0.0 1 1 1.7e-08 2.9e-06 21.0 0.0 24 61 158 195 149 274 0.82 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 AAA_23 PF13476.1 202 0.00079 13.4 0.1 1 1 9.5e-06 0.0016 12.4 0.1 19 39 158 178 149 184 0.85 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 AAA_18 PF13238.1 129 8.1e-06 19.9 0.0 1 1 9.8e-08 1.7e-05 18.8 0.0 1 29 161 194 161 213 0.77 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_30 - 418 CbiA PF01656.18 195 1.3e-22 73.8 0.0 1 1 1.1e-24 1.9e-22 73.3 0.0 1 178 117 348 117 365 0.73 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_145 - 695 KaiC PF06745.8 227 3.3e-05 16.7 0.0 1 2 1.4e-05 0.0012 11.6 0.0 22 78 201 259 199 342 0.79 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_145 - 695 KaiC PF06745.8 227 3.3e-05 16.7 0.0 2 2 0.0078 0.67 2.6 0.0 48 105 357 414 348 425 0.85 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_63 - 332 KaiC PF06745.8 227 0.00029 13.6 0.0 1 1 6.1e-06 0.00052 12.8 0.0 16 53 155 190 148 240 0.77 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 AAA_14 PF13173.1 128 0.00047 13.7 0.1 1 2 0.0022 0.38 4.3 0.0 64 96 135 165 98 166 0.69 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 AAA_14 PF13173.1 128 0.00047 13.7 0.1 2 2 3.1e-05 0.0052 10.4 0.0 2 35 158 191 157 215 0.80 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 GvpD PF07088.6 484 4.4e-06 18.9 0.0 1 1 3.9e-08 6.6e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_72 - 562 HI0933_like PF03486.9 409 7.4e-09 28.1 5.0 1 2 4.3e-07 7.3e-05 15.0 2.8 2 33 100 131 99 139 0.91 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 HI0933_like PF03486.9 409 7.4e-09 28.1 5.0 2 2 1.7e-06 0.00029 13.0 0.0 83 163 286 362 281 379 0.85 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_63 - 332 AAA_29 PF13555.1 62 0.0017 11.6 0.0 1 1 2.3e-05 0.004 10.4 0.0 19 43 157 178 145 188 0.75 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_72 - 562 FAD_binding_2 PF00890.19 417 1.6e-06 20.8 5.3 1 3 9.5e-09 1.6e-06 20.8 5.3 2 32 101 131 100 138 0.91 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 FAD_binding_2 PF00890.19 417 1.6e-06 20.8 5.3 2 3 0.034 5.8 -0.8 0.2 142 204 311 366 286 382 0.67 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 FAD_binding_2 PF00890.19 417 1.6e-06 20.8 5.3 3 3 0.0019 0.32 3.4 0.1 373 402 374 405 368 419 0.86 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_8 - 353 AAA PF00004.24 132 0.00045 14.1 0.0 1 1 6.8e-06 0.0012 12.8 0.0 1 73 99 177 99 188 0.66 # 7613 # 8671 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.407 1_12 - 595 UvrD_C PF13361.1 351 2.6e-42 139.1 0.0 1 1 2.8e-44 4.8e-42 138.2 0.0 2 348 254 564 253 567 0.86 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_72 - 562 Thi4 PF01946.12 230 0.00046 13.0 0.4 1 1 6.3e-06 0.0011 11.7 0.4 19 70 100 150 95 158 0.88 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_102 - 795 PAPS_reduct PF01507.14 174 2.7e-08 27.5 0.0 1 1 4e-10 6.9e-08 26.1 0.0 3 150 78 264 76 269 0.71 # 104763 # 107147 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.516 1_63 - 332 Sigma54_activat PF00158.21 168 1.4e-05 18.2 0.0 1 1 3.1e-07 2.7e-05 17.4 0.0 14 54 150 190 138 213 0.82 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_8 - 353 Sigma54_activat PF00158.21 168 0.00033 13.8 0.0 1 1 2.2e-05 0.0019 11.3 0.0 20 119 94 188 78 218 0.67 # 7613 # 8671 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.407 1_72 - 562 Pyr_redox_3 PF13738.1 203 2.5e-18 60.5 0.1 1 3 1.5e-06 0.00025 14.8 0.0 164 199 95 130 48 134 0.85 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 Pyr_redox_3 PF13738.1 203 2.5e-18 60.5 0.1 2 3 5.8e-09 1e-06 22.6 0.0 115 201 219 304 174 306 0.81 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 Pyr_redox_3 PF13738.1 203 2.5e-18 60.5 0.1 3 3 5.6e-08 9.6e-06 19.4 0.0 89 147 317 372 309 431 0.82 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_63 - 332 MMR_HSR1 PF01926.18 116 0.00073 13.2 0.0 1 1 7.1e-06 0.0012 12.5 0.0 2 41 161 205 160 310 0.84 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_80 - 254 N6_Mtase PF02384.11 311 5.7e-09 29.1 0.0 1 2 1.2e-05 0.00069 12.4 0.0 52 136 106 176 79 179 0.54 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_80 - 254 N6_Mtase PF02384.11 311 5.7e-09 29.1 0.0 2 2 6.1e-06 0.00035 13.3 0.0 161 200 179 219 176 247 0.76 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_49 - 563 N6_Mtase PF02384.11 311 4.2e-06 19.6 0.0 1 1 1.3e-07 7.6e-06 18.8 0.0 89 138 444 491 424 502 0.88 # 56193 # 57881 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_115 - 164 N6_Mtase PF02384.11 311 0.0014 11.3 0.0 1 1 3.2e-05 0.0018 11.0 0.0 37 78 14 59 5 84 0.72 # 114615 # 115106 # 1 # ID=1_115;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 1_63 - 332 DUF258 PF03193.11 161 0.00019 14.3 0.0 1 1 2e-06 0.00035 13.5 0.0 29 61 151 184 129 224 0.81 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_145 - 695 TraG-D_C PF12696.2 128 1.2e-11 38.2 0.0 1 1 1.5e-13 2.5e-11 37.2 0.0 2 112 505 617 504 631 0.82 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_30 - 418 AAA_31 PF13614.1 157 3.3e-08 27.3 0.4 1 2 9.4e-08 1.6e-05 18.5 0.0 9 128 123 270 121 292 0.83 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_30 - 418 AAA_31 PF13614.1 157 3.3e-08 27.3 0.4 2 2 0.00088 0.15 5.6 0.1 14 89 299 381 284 410 0.72 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_63 - 332 AAA_33 PF13671.1 143 0.00061 13.3 0.0 1 1 5.9e-06 0.001 12.6 0.0 2 26 161 188 160 256 0.81 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_80 - 254 Methyltransf_26 PF13659.1 117 4.5e-13 42.9 0.0 1 1 2.2e-14 1.9e-12 40.9 0.0 1 115 101 201 101 207 0.81 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_49 - 563 Methyltransf_26 PF13659.1 117 8.5e-09 29.2 0.0 1 1 2.2e-10 1.9e-08 28.1 0.0 3 116 421 515 417 516 0.80 # 56193 # 57881 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_72 - 562 XdhC_C PF13478.1 136 0.0014 12.6 1.0 1 2 0.08 14 -0.3 0.1 1 29 101 129 101 163 0.86 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 XdhC_C PF13478.1 136 0.0014 12.6 1.0 2 2 6.9e-05 0.012 9.6 0.1 1 66 273 351 273 371 0.64 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_12 - 595 AAA_30 PF13604.1 196 5.6e-05 16.4 0.3 1 2 2.9e-05 0.0025 11.1 0.0 4 66 6 66 4 90 0.72 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_12 - 595 AAA_30 PF13604.1 196 5.6e-05 16.4 0.3 2 2 0.018 1.5 2.0 0.0 91 132 187 227 162 261 0.83 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_63 - 332 AAA_30 PF13604.1 196 0.00026 14.3 0.1 1 2 4.7e-05 0.004 10.4 0.1 11 51 151 190 145 197 0.80 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 AAA_30 PF13604.1 196 0.00026 14.3 0.1 2 2 0.024 2 1.6 0.0 121 178 204 258 191 272 0.77 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_145 - 695 FtsK_SpoIIIE PF01580.13 205 2.1e-07 24.2 0.0 1 2 1.1e-06 9.2e-05 15.6 0.0 22 80 181 236 170 243 0.86 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_145 - 695 FtsK_SpoIIIE PF01580.13 205 2.1e-07 24.2 0.0 2 2 0.00094 0.08 6.0 0.0 169 204 510 542 500 543 0.81 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_63 - 332 FtsK_SpoIIIE PF01580.13 205 1.5e-06 21.5 0.0 1 1 3.4e-08 2.9e-06 20.5 0.0 38 64 158 184 139 191 0.81 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_80 - 254 MTS PF05175.9 170 1.4e-08 27.9 0.0 1 1 2.6e-10 2.3e-08 27.3 0.0 40 144 109 205 89 224 0.72 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_49 - 563 MTS PF05175.9 170 4.6e-07 23.0 0.0 1 1 9.4e-09 8e-07 22.2 0.0 94 156 474 531 446 542 0.80 # 56193 # 57881 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_63 - 332 ABC_tran PF00005.22 137 2.7e-06 21.4 0.0 1 1 2.5e-08 4.2e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_72 - 562 K_oxygenase PF13434.1 341 5.7e-06 19.0 0.2 1 3 0.0041 0.7 2.3 0.2 187 223 95 129 86 132 0.74 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 K_oxygenase PF13434.1 341 5.7e-06 19.0 0.2 2 3 2.9e-06 0.00049 12.7 0.0 130 231 217 309 200 339 0.79 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 K_oxygenase PF13434.1 341 5.7e-06 19.0 0.2 3 3 0.022 3.7 -0.0 0.0 139 160 345 366 314 376 0.63 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_63 - 332 ATP-synt_ab PF00006.20 215 0.00093 12.4 0.0 1 1 8.8e-06 0.0015 11.7 0.0 16 62 159 205 151 247 0.86 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_49 - 563 Cons_hypoth95 PF03602.10 183 0.00055 13.0 0.0 1 1 5.9e-06 0.001 12.2 0.0 105 139 470 506 450 519 0.69 # 56193 # 57881 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_12 - 595 AAA_19 PF13245.1 76 2.5e-09 30.5 0.0 1 1 6.1e-10 3.5e-08 26.8 0.0 3 75 12 86 10 87 0.84 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_30 - 418 AAA_19 PF13245.1 76 0.00062 13.2 0.0 1 1 2.7e-05 0.0016 11.9 0.0 20 48 125 152 123 182 0.82 # 33080 # 34333 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.377 1_63 - 332 AAA_19 PF13245.1 76 0.0011 12.4 0.1 1 1 4.2e-05 0.0024 11.3 0.1 5 48 153 191 149 224 0.78 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_31 - 894 AAA_10 PF12846.2 304 1.4e-65 215.3 0.0 1 1 5e-67 2.1e-65 214.7 0.0 1 303 456 812 456 813 0.93 # 38402 # 41083 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 1_145 - 695 AAA_10 PF12846.2 304 5.6e-17 55.7 0.0 1 1 2.7e-18 1.1e-16 54.7 0.0 2 296 199 578 198 585 0.73 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_12 - 595 AAA_10 PF12846.2 304 0.00044 13.4 0.2 1 1 4.7e-05 0.002 11.2 0.0 1 25 16 40 16 49 0.80 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_63 - 332 AAA_10 PF12846.2 304 0.00045 13.3 0.0 1 1 1.6e-05 0.0007 12.7 0.0 3 29 160 185 158 233 0.81 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_12 - 595 AAA_12 PF13087.1 200 1.2e-08 28.3 0.1 1 3 0.00079 0.14 5.2 0.0 98 153 33 84 13 94 0.78 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_12 - 595 AAA_12 PF13087.1 200 1.2e-08 28.3 0.1 2 3 0.0026 0.45 3.5 0.0 5 52 240 287 237 400 0.74 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_12 - 595 AAA_12 PF13087.1 200 1.2e-08 28.3 0.1 3 3 5.1e-07 8.7e-05 15.6 0.0 136 196 497 563 409 567 0.81 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_72 - 562 FAD_oxidored PF12831.2 428 1e-06 21.7 3.8 1 2 5.9e-09 1e-06 21.7 3.8 1 41 100 139 100 159 0.83 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 FAD_oxidored PF12831.2 428 1e-06 21.7 3.8 2 2 0.01 1.7 1.2 0.0 84 120 305 341 261 364 0.71 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 DAO PF01266.19 358 1.1e-11 37.8 7.5 1 2 1.9e-08 3.2e-06 19.9 1.5 2 35 101 134 100 161 0.85 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 DAO PF01266.19 358 1.1e-11 37.8 7.5 2 2 7.7e-09 1.3e-06 21.1 0.5 151 239 314 400 274 529 0.80 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_63 - 332 ResIII PF04851.10 184 1e-05 19.1 0.0 1 1 9.6e-08 1.6e-05 18.4 0.0 22 61 148 196 104 202 0.81 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_80 - 254 Methyltransf_31 PF13847.1 152 0.00024 14.4 0.0 1 1 2.7e-06 0.00045 13.5 0.0 8 106 105 197 99 240 0.78 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_12 - 595 Viral_helicase1 PF01443.13 234 3.9e-08 26.7 0.1 1 3 0.0028 0.48 3.5 0.0 2 21 20 39 19 91 0.63 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_12 - 595 Viral_helicase1 PF01443.13 234 3.9e-08 26.7 0.1 2 3 0.0043 0.74 2.9 0.0 40 135 167 261 132 297 0.74 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_12 - 595 Viral_helicase1 PF01443.13 234 3.9e-08 26.7 0.1 3 3 2.8e-07 4.8e-05 16.6 0.0 174 232 485 562 400 563 0.67 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_63 - 332 DUF2075 PF09848.4 352 0.00016 14.4 0.0 1 1 1.3e-06 0.00022 13.9 0.0 1 32 158 187 158 216 0.76 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 DEAD PF00270.24 169 5.1e-06 19.7 0.0 1 1 1.1e-07 9.7e-06 18.8 0.0 13 70 157 211 144 242 0.78 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_12 - 595 DEAD PF00270.24 169 5.1e-05 16.5 0.7 1 1 7.6e-06 0.00065 12.9 0.7 4 105 8 107 5 222 0.77 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_72 - 562 Pyr_redox PF00070.22 80 1.6e-19 63.8 5.4 1 2 1.2e-06 0.00021 15.4 1.5 2 31 101 130 100 132 0.95 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 Pyr_redox PF00070.22 80 1.6e-19 63.8 5.4 2 2 3.2e-17 5.4e-15 49.3 0.1 1 72 272 342 272 351 0.91 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_145 - 695 DUF853 PF05872.7 504 4.9e-05 15.4 0.0 1 1 6.2e-07 0.00011 14.3 0.0 10 60 187 237 179 245 0.87 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_49 - 563 Methyltransf_27 PF13708.1 194 6.1e-57 185.9 0.1 1 1 7.5e-59 1.3e-56 184.9 0.0 2 194 92 295 91 295 0.95 # 56193 # 57881 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_145 - 695 TrwB_AAD_bind PF10412.4 386 8.2e-17 54.5 0.0 1 2 1.3e-06 0.00011 14.5 0.0 16 52 199 235 191 341 0.88 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_145 - 695 TrwB_AAD_bind PF10412.4 386 8.2e-17 54.5 0.0 2 2 1.6e-13 1.4e-11 37.2 0.0 164 345 412 604 391 646 0.77 # 135389 # 137473 # -1 # ID=1_145;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_63 - 332 TrwB_AAD_bind PF10412.4 386 2.3e-05 16.8 0.1 1 1 4.2e-07 3.6e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_80 - 254 N6-adenineMlase PF10237.4 162 1.2e-05 18.6 0.0 1 1 1.1e-07 1.9e-05 18.0 0.0 84 133 163 214 133 225 0.77 # 88054 # 88815 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_63 - 332 Sigma54_activ_2 PF14532.1 138 3.9e-06 20.6 0.0 1 1 5e-08 8.6e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_94 - 203 TIGR00755 TIGR00755 256 4.3e-05 16.2 0.1 1 1 4.8e-07 8.2e-05 15.3 0.1 32 86 83 139 61 150 0.86 # 98768 # 99376 # 1 # ID=1_94;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.498 1_47 - 258 MethyltransfD12 PF02086.10 260 3.4e-42 138.3 0.0 1 1 2.2e-44 3.8e-42 138.1 0.0 10 256 2 235 1 239 0.90 # 53599 # 54372 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.448 1_63 - 332 Pox_A32 PF04665.7 241 0.00017 14.6 0.0 1 1 1.7e-06 0.00029 13.8 0.0 12 46 157 191 150 210 0.85 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 GTP_EFTU PF00009.22 188 0.00037 13.6 0.2 1 1 3.5e-06 0.00059 12.9 0.2 2 32 157 187 156 205 0.83 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 RNA_helicase PF00910.17 107 3.4e-05 17.7 0.1 1 2 3.5e-06 0.00059 13.7 0.0 1 25 161 185 161 242 0.75 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 RNA_helicase PF00910.17 107 3.4e-05 17.7 0.1 2 2 0.027 4.6 1.2 0.1 69 100 290 322 281 328 0.78 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_63 - 332 UPF0079 PF02367.12 123 1e-05 18.8 0.0 1 1 1.2e-07 2.1e-05 17.8 0.0 9 45 152 188 145 193 0.85 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_72 - 562 AlaDh_PNT_C PF01262.16 168 1.5e-06 21.6 2.3 1 2 3.9e-06 0.00067 12.9 0.3 16 50 94 128 80 131 0.87 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_72 - 562 AlaDh_PNT_C PF01262.16 168 1.5e-06 21.6 2.3 2 2 0.00012 0.02 8.1 0.1 19 60 269 310 260 341 0.84 # 79274 # 80959 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_63 - 332 Myosin_head PF00063.16 689 0.00027 12.7 0.0 1 1 2.2e-06 0.00038 12.2 0.0 84 110 157 183 147 209 0.90 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_12 - 595 UvrD-helicase PF00580.16 315 6.4e-31 101.4 2.9 1 3 5.3e-17 9e-15 48.4 0.0 2 105 5 91 4 95 0.92 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_12 - 595 UvrD-helicase PF00580.16 315 6.4e-31 101.4 2.9 2 3 5.5e-18 9.3e-16 51.6 0.3 208 314 145 248 107 249 0.86 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_12 - 595 UvrD-helicase PF00580.16 315 6.4e-31 101.4 2.9 3 3 0.026 4.5 0.1 0.0 91 128 412 455 373 528 0.74 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_63 - 332 NACHT PF05729.7 166 0.00015 15.1 0.0 1 1 1.9e-06 0.00033 14.0 0.0 1 27 159 185 159 188 0.90 # 70767 # 71762 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_12 - 595 AAA_25 PF13481.1 194 0.00059 12.9 0.0 1 1 1.8e-05 0.003 10.6 0.0 17 63 3 46 1 62 0.78 # 11469 # 13253 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_94 - 203 Spermine_synth PF01564.12 246 0.0006 12.4 0.0 1 1 5e-06 0.00086 11.9 0.0 79 143 83 141 65 156 0.84 # 98768 # 99376 # 1 # ID=1_94;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.498 1_8 - 353 AAA_5 PF07728.9 139 1.1e-33 109.5 0.0 1 1 1.1e-35 1.8e-33 108.9 0.0 1 139 98 238 98 238 0.96 # 7613 # 8671 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.407 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/86c54884-eff7-4d45-9a1c-34f65f8fa044 # Target file: checkm_output/bins/pn186/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn186/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/86c54884-eff7-4d45-9a1c-34f65f8fa044 checkm_output/bins/pn186/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:12:53 2020 # [ok]