# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 280 AAA_25 PF13481.1 194 3.5e-38 120.6 0.0 1 1 5e-39 5e-38 120.1 0.0 14 192 12 183 5 185 0.88 # 1988 # 2827 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.669 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/1c7e9bf1-3176-4c89-8722-5f06b8f624dd # Target file: checkm_output/bins/pn147/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn147/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/1c7e9bf1-3176-4c89-8722-5f06b8f624dd checkm_output/bins/pn147/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:12:27 2020 # [ok]