# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_15 - 215 cobW PF02492.14 178 0.00032 12.5 0.8 1 1 2.4e-05 0.00081 11.2 0.8 3 46 3 48 1 130 0.69 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 cobW PF02492.14 178 0.00034 12.4 0.0 1 1 1.7e-05 0.00056 11.7 0.0 3 21 39 57 37 80 0.85 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 Thymidylate_kin PF02223.12 186 0.0003 12.5 0.3 1 2 2.2e-05 0.0015 10.2 0.0 6 29 11 34 9 47 0.91 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 Thymidylate_kin PF02223.12 186 0.0003 12.5 0.3 2 2 0.03 2 0.0 0.0 115 165 128 186 108 210 0.52 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 MipZ PF09140.6 261 1.3e-15 49.5 3.1 1 3 1.9e-11 1.3e-09 29.8 0.2 2 53 2 52 1 61 0.88 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 MipZ PF09140.6 261 1.3e-15 49.5 3.1 2 3 3.3e-08 2.2e-06 19.2 0.2 84 145 64 125 59 134 0.90 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 MipZ PF09140.6 261 1.3e-15 49.5 3.1 3 3 0.059 3.9 -1.3 0.0 219 254 182 207 172 210 0.56 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 YhjQ PF06564.7 244 0.00037 12.2 0.8 1 2 3.3e-05 0.0022 9.7 0.2 6 36 5 35 1 39 0.87 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 YhjQ PF06564.7 244 0.00037 12.2 0.8 2 2 0.015 1 0.9 0.0 99 160 62 124 49 131 0.63 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 DUF87 PF01935.12 229 0.00015 13.9 0.0 1 2 1.7e-05 0.0011 11.1 0.1 26 44 39 57 21 59 0.91 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 DUF87 PF01935.12 229 0.00015 13.9 0.0 2 2 0.027 1.8 0.6 0.0 136 184 128 196 95 215 0.65 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 NB-ARC PF00931.17 287 0.00041 11.6 0.1 1 1 9.7e-06 0.00065 10.9 0.1 18 37 35 54 24 65 0.87 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_22 PF13401.1 131 1.6e-05 17.4 0.7 1 1 1.7e-06 0.00011 14.7 0.7 3 25 35 57 31 207 0.82 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 SRP54 PF00448.17 196 1.8e-11 36.2 0.3 1 1 5e-13 3.3e-11 35.3 0.3 6 98 4 93 1 98 0.79 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 AAA_15 PF13175.1 415 0.00016 13.1 0.0 1 2 4e-05 0.0027 9.1 0.0 25 46 34 60 9 93 0.72 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_15 PF13175.1 415 0.00016 13.1 0.0 2 2 0.0056 0.38 2.0 0.0 372 414 164 205 140 205 0.89 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_17 PF13207.1 121 1.9e-05 17.9 0.2 1 1 8.7e-07 2.9e-05 17.2 0.2 2 19 39 56 38 219 0.85 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 AAA_17 PF13207.1 121 0.00026 14.2 0.1 1 1 1.1e-05 0.00035 13.8 0.1 9 76 11 85 2 183 0.69 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 AAA_21 PF13304.1 303 1.6e-13 43.6 0.0 1 2 1.9e-06 0.00013 14.3 0.1 1 22 38 59 38 71 0.87 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_21 PF13304.1 303 1.6e-13 43.6 0.0 2 2 3.1e-10 2.1e-08 26.8 0.0 234 301 141 205 134 206 0.96 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 MobB PF03205.9 140 0.0001 14.4 0.2 1 1 6.1e-06 0.0002 13.4 0.2 5 39 4 39 1 88 0.70 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 MobB PF03205.9 140 0.00018 13.6 0.0 1 1 9.6e-06 0.00032 12.8 0.0 3 20 39 56 37 108 0.84 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 ArsA_ATPase PF02374.10 305 7.7e-09 27.3 3.9 1 3 1.6e-08 1.1e-06 20.2 0.8 6 38 5 38 1 39 0.85 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 ArsA_ATPase PF02374.10 305 7.7e-09 27.3 3.9 2 3 0.0001 0.0069 7.7 0.0 96 135 46 87 35 89 0.83 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 ArsA_ATPase PF02374.10 305 7.7e-09 27.3 3.9 3 3 0.095 6.4 -2.0 0.0 73 108 133 167 111 187 0.54 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 SKI PF01202.17 158 0.00045 12.4 0.4 1 2 0.0009 0.06 5.5 0.2 2 16 11 25 10 31 0.89 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 SKI PF01202.17 158 0.00045 12.4 0.4 2 2 0.0013 0.089 5.0 0.0 87 150 31 95 24 109 0.72 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 Zeta_toxin PF06414.7 201 7.8e-05 14.1 0.0 1 1 2e-06 0.00013 13.4 0.0 20 109 4 94 1 103 0.79 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 SMC_N PF02463.14 220 1.9e-09 29.4 0.0 1 1 2.3e-09 1.6e-07 23.1 0.0 24 212 36 216 24 220 0.76 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 VirC1 PF07015.6 231 1.5e-08 26.3 0.1 1 1 2.6e-10 1.8e-08 26.1 0.1 8 201 7 200 1 210 0.72 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 Fer4_NifH PF00142.13 273 5.5e-05 14.7 1.0 1 2 2.2e-06 0.00014 13.4 0.3 8 37 9 38 1 52 0.86 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 Fer4_NifH PF00142.13 273 5.5e-05 14.7 1.0 2 2 0.031 2.1 -0.3 0.0 189 210 67 88 42 149 0.59 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 AAA_16 PF13191.1 185 4.1e-06 19.2 0.4 1 1 1.4e-07 9.3e-06 18.0 0.4 18 56 30 69 23 200 0.73 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_23 PF13476.1 202 0.00033 13.3 0.0 1 1 7.1e-06 0.00047 12.8 0.0 19 39 36 56 18 94 0.84 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_18 PF13238.1 129 2.8e-05 16.8 0.7 1 1 6.1e-06 0.0002 14.0 0.7 1 19 39 57 39 214 0.88 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 AAA_18 PF13238.1 129 0.0003 13.5 0.2 1 1 1.9e-05 0.00065 12.4 0.1 8 42 11 45 9 135 0.74 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 AAA_13 PF13166.1 712 0.0011 9.7 0.0 1 2 3.4e-05 0.0023 8.7 0.0 20 42 40 62 25 94 0.83 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_13 PF13166.1 712 0.0011 9.7 0.0 2 2 0.093 6.2 -2.7 0.0 525 570 159 202 155 205 0.87 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 CbiA PF01656.18 195 3.2e-18 58.2 0.0 1 1 6.5e-20 4.4e-18 57.7 0.0 2 148 4 138 3 182 0.72 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 KaiC PF06745.8 227 0.00032 12.2 0.1 1 1 9.4e-06 0.00063 11.2 0.1 7 35 25 52 22 66 0.88 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_14 PF13173.1 128 0.00036 12.8 0.0 1 1 1.2e-05 0.00082 11.6 0.0 2 41 36 75 35 131 0.63 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_29 PF13555.1 62 1.8e-06 19.8 0.1 1 1 5.1e-08 3.4e-06 18.9 0.1 16 42 30 55 24 71 0.78 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 MMR_HSR1 PF01926.18 116 0.00013 14.3 0.2 1 1 3.2e-06 0.00021 13.6 0.2 2 20 39 57 38 201 0.91 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 DUF258 PF03193.11 161 9.4e-07 20.5 0.0 1 1 2e-08 1.4e-06 19.9 0.0 19 61 19 62 4 91 0.83 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_4 - 754 TruB_N PF01509.13 149 0.00021 13.8 0.0 1 1 6.4e-06 0.00043 12.8 0.0 20 103 10 99 7 114 0.81 # 2867 # 5128 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 2_15 - 215 AAA_31 PF13614.1 157 8.2e-10 31.2 0.2 1 2 1e-09 7e-08 24.9 0.1 2 42 2 42 1 70 0.86 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 AAA_31 PF13614.1 157 8.2e-10 31.2 0.2 2 2 0.0022 0.15 4.3 0.0 106 134 67 95 60 109 0.82 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 NTPase_1 PF03266.10 168 6.5e-05 15.0 0.1 1 2 3.4e-05 0.0023 10.0 0.0 2 44 39 83 38 91 0.80 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 NTPase_1 PF03266.10 168 6.5e-05 15.0 0.1 2 2 0.0042 0.28 3.2 0.0 87 151 153 219 115 230 0.73 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 AAA_33 PF13671.1 143 8.9e-05 14.7 0.1 1 2 1.6e-05 0.00055 12.2 0.1 9 85 11 94 4 175 0.73 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 AAA_33 PF13671.1 143 8.9e-05 14.7 0.1 2 2 0.056 1.9 0.7 0.0 75 96 145 166 129 207 0.77 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 AAA_33 PF13671.1 143 0.00025 13.3 1.4 1 1 6.1e-05 0.0021 10.3 1.4 2 19 39 56 38 214 0.73 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 KTI12 PF08433.5 270 0.0001 13.9 0.1 1 2 3.3e-06 0.00022 12.8 0.0 11 49 11 49 1 64 0.86 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_15 - 215 KTI12 PF08433.5 270 0.0001 13.9 0.1 2 2 0.079 5.3 -1.6 0.0 222 222 113 113 58 163 0.50 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 AAA_30 PF13604.1 196 7.2e-05 14.8 0.4 1 1 1.9e-06 0.00012 14.0 0.4 18 58 36 76 29 202 0.87 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 FtsK_SpoIIIE PF01580.13 205 8.8e-05 14.4 0.0 1 1 3.8e-06 0.00025 12.9 0.0 37 60 35 58 14 77 0.81 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 ABC_tran PF00005.22 137 1.6e-36 118.0 0.0 1 1 3.4e-38 2.3e-36 117.5 0.0 1 136 26 171 26 172 0.92 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 ATP-synt_ab PF00006.20 215 0.00018 13.4 0.1 1 1 8.3e-06 0.00056 11.8 0.1 8 35 29 56 23 74 0.86 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_19 PF13245.1 76 0.00013 14.1 0.1 1 1 3.6e-05 0.0012 11.0 0.0 10 54 36 75 29 87 0.75 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 AAA_19 PF13245.1 76 0.00013 14.0 0.5 1 1 1.1e-05 0.00036 12.7 0.4 20 56 11 45 3 64 0.81 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 AAA_10 PF12846.2 304 8.8e-06 17.6 0.0 1 1 3.4e-07 2.2e-05 16.3 0.0 4 29 39 65 37 85 0.76 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 SbcCD_C PF13558.1 90 5.7e-06 18.6 0.2 1 1 1.3e-06 8.8e-05 14.8 0.2 32 89 143 187 126 188 0.76 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 DUF2075 PF09848.4 352 5.4e-06 17.8 0.1 1 1 9.3e-08 6.2e-06 17.7 0.1 5 95 4 90 1 137 0.75 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_2 - 657 Plug PF07715.10 108 2.4e-24 78.1 1.9 1 1 2.3e-25 7.6e-24 76.5 1.9 3 108 46 149 44 149 0.94 # 253 # 2223 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.489 3_4 - 754 Plug PF07715.10 108 9.6e-11 34.4 4.8 1 1 2.9e-12 9.6e-11 34.4 4.8 13 107 61 166 43 167 0.89 # 2867 # 5128 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 1_8 - 232 NACHT PF05729.7 166 0.00013 14.0 0.1 1 2 8.6e-06 0.00057 11.9 0.0 3 20 39 56 37 76 0.86 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 NACHT PF05729.7 166 0.00013 14.0 0.1 2 2 0.057 3.8 -0.5 0.0 91 115 168 192 154 215 0.75 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_25 PF13481.1 194 4.1e-06 18.6 0.0 1 2 1e-06 3.4e-05 15.6 0.0 29 58 32 62 14 131 0.78 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_25 PF13481.1 194 4.1e-06 18.6 0.0 2 2 0.034 1.1 0.9 0.0 161 188 175 201 165 206 0.69 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 AAA_25 PF13481.1 194 2.2e-05 16.3 0.6 1 1 1.7e-06 5.7e-05 14.9 0.3 41 149 9 85 2 109 0.65 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 232 AAA_28 PF13521.1 163 5e-07 22.1 0.1 1 2 5.8e-07 3.9e-05 16.0 0.0 2 21 39 58 38 94 0.79 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 232 AAA_28 PF13521.1 163 5e-07 22.1 0.1 2 2 0.0029 0.19 4.0 0.0 19 79 111 168 104 174 0.63 # 3624 # 4319 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 215 APS_kinase PF01583.15 157 1.9e-06 20.0 0.1 1 1 5.8e-08 3.9e-06 18.9 0.1 11 43 10 42 2 53 0.88 # 14270 # 14914 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/417c64ce-2a13-4e5c-baff-ea472c0b6e44 # Target file: checkm_output/bins/pn132/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn132/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/417c64ce-2a13-4e5c-baff-ea472c0b6e44 checkm_output/bins/pn132/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:12:20 2020 # [ok]