# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_21 - 188 Methyltransf_12 PF08242.7 99 1.9e-05 18.0 0.0 1 1 2.9e-07 2.8e-05 17.5 0.0 1 99 55 144 55 144 0.83 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_21 - 188 RrnaAD PF00398.15 262 2.5e-09 29.3 0.0 1 1 3.3e-11 3.2e-09 29.0 0.0 9 113 29 128 24 148 0.89 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_5 - 402 MipZ PF09140.6 261 4.8e-06 18.6 0.8 1 2 4.1e-05 0.004 9.1 0.0 1 50 110 164 110 190 0.77 # 2195 # 3400 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_5 - 402 MipZ PF09140.6 261 4.8e-06 18.6 0.8 2 2 0.00011 0.01 7.7 0.1 90 135 237 282 221 287 0.88 # 2195 # 3400 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_22 - 180 SSB PF00436.20 104 3.4e-41 132.2 0.3 1 1 4.5e-43 4.3e-41 131.9 0.3 1 101 6 109 6 112 0.96 # 16638 # 17177 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.594 1_21 - 188 Methyltransf_18 PF12847.2 112 6.2e-11 35.8 0.0 1 1 1.3e-12 1.3e-10 34.7 0.0 4 109 53 146 50 148 0.89 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_68 - 1757 UvrD_C_2 PF13538.1 104 5.1e-08 25.9 0.6 1 2 0.013 1.3 2.1 0.0 6 44 1227 1265 1223 1294 0.75 # 50541 # 55811 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_68 - 1757 UvrD_C_2 PF13538.1 104 5.1e-08 25.9 0.6 2 2 2.1e-08 2e-06 20.8 0.1 3 102 1341 1444 1339 1446 0.76 # 50541 # 55811 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_45 - 820 DUF87 PF01935.12 229 6.7e-08 25.4 0.0 1 1 2e-09 1.9e-07 23.9 0.0 26 222 426 613 412 620 0.77 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_64 - 394 AAA_22 PF13401.1 131 0.00067 12.7 0.0 1 1 4e-05 0.0019 11.2 0.0 7 30 188 211 182 249 0.85 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_49 - 154 AAA_22 PF13401.1 131 0.00074 12.5 0.1 1 1 3.4e-05 0.0016 11.4 0.1 7 94 16 109 13 119 0.75 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_12 - 218 N6_N4_Mtase PF01555.13 231 4.2e-35 114.1 0.0 1 1 2.2e-34 2.1e-32 105.3 0.0 5 228 15 190 13 193 0.90 # 8931 # 9584 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.561 1_64 - 394 AAA_17 PF13207.1 121 0.00013 15.7 0.0 1 1 2.6e-06 0.00025 14.8 0.0 3 28 189 218 187 355 0.71 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_45 - 820 MobB PF03205.9 140 0.00012 14.7 0.1 1 2 5e-05 0.0024 10.4 0.0 4 37 427 459 425 467 0.79 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_45 - 820 MobB PF03205.9 140 0.00012 14.7 0.1 2 2 0.063 3 0.4 0.0 25 64 639 676 634 689 0.86 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_64 - 394 MobB PF03205.9 140 0.00061 12.4 0.0 1 1 2.5e-05 0.0012 11.4 0.0 7 34 192 219 188 225 0.89 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_35 - 120 CTP_transf_2 PF01467.21 157 0.00077 12.4 0.0 1 1 8.5e-06 0.00082 12.3 0.0 31 64 6 38 1 93 0.70 # 26120 # 26479 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 1_5 - 402 ArsA_ATPase PF02374.10 305 0.00071 11.5 0.0 1 1 1.8e-05 0.0018 10.2 0.0 4 136 113 255 110 257 0.63 # 2195 # 3400 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_5 - 402 Methyltransf_24 PF13578.1 106 0.00082 13.1 0.0 1 1 5.7e-05 0.0055 10.4 0.0 4 79 120 255 117 271 0.64 # 2195 # 3400 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_64 - 394 Zeta_toxin PF06414.7 201 0.00024 13.1 0.0 1 2 0.078 7.5 -1.6 0.0 106 127 153 174 148 177 0.85 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_64 - 394 Zeta_toxin PF06414.7 201 0.00024 13.1 0.0 2 2 1.6e-05 0.0015 10.5 0.0 21 49 190 219 182 238 0.85 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_5 - 402 VirC1 PF07015.6 231 0.00057 11.8 0.0 1 2 0.015 1.4 0.7 0.0 4 26 112 134 101 143 0.82 # 2195 # 3400 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_5 - 402 VirC1 PF07015.6 231 0.00057 11.8 0.0 2 2 6.7e-05 0.0065 8.4 0.0 83 154 245 322 231 361 0.70 # 2195 # 3400 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_5 - 402 Fer4_NifH PF00142.13 273 1.2e-05 17.5 0.0 1 1 2.3e-07 2.2e-05 16.6 0.0 7 67 117 182 112 195 0.80 # 2195 # 3400 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_49 - 154 Arch_ATPase PF01637.13 234 9.3e-05 15.0 0.4 1 1 1.7e-06 0.00016 14.2 0.4 23 125 16 109 7 119 0.69 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_64 - 394 AAA_16 PF13191.1 185 4.9e-06 19.5 0.0 1 1 8.3e-08 8.1e-06 18.8 0.0 21 62 182 224 179 265 0.80 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_5 - 402 CbiA PF01656.18 195 1.6e-23 76.0 0.0 1 1 2.8e-25 2.7e-23 75.2 0.0 1 158 112 319 112 351 0.71 # 2195 # 3400 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_49 - 154 AAA_14 PF13173.1 128 7.5e-06 18.8 0.1 1 1 9.5e-08 9.2e-06 18.5 0.1 5 87 16 97 13 135 0.69 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_49 - 154 GvpD PF07088.6 484 0.00019 12.7 0.0 1 2 0.052 5 -1.9 0.0 11 26 14 29 9 44 0.75 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_49 - 154 GvpD PF07088.6 484 0.00019 12.7 0.0 2 2 4.8e-06 0.00046 11.4 0.0 138 181 92 134 82 143 0.86 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_49 - 154 AAA_29 PF13555.1 62 0.00083 11.8 0.0 1 1 1.5e-05 0.0015 11.0 0.0 17 40 8 30 1 35 0.79 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_49 - 154 Sigma54_activat PF00158.21 168 0.00016 14.0 0.0 1 2 1.3e-05 0.0012 11.1 0.0 16 62 7 54 1 61 0.79 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_49 - 154 Sigma54_activat PF00158.21 168 0.00016 14.0 0.0 2 2 0.018 1.8 0.9 0.0 94 120 71 97 65 107 0.81 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_49 - 154 MMR_HSR1 PF01926.18 116 2.5e-05 17.1 0.0 1 1 3.2e-07 3.1e-05 16.8 0.0 2 90 16 111 15 140 0.69 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_21 - 188 N6_Mtase PF02384.11 311 8.3e-05 14.6 0.0 1 3 1.7e-05 0.0017 10.3 0.0 28 62 32 66 20 75 0.88 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_21 - 188 N6_Mtase PF02384.11 311 8.3e-05 14.6 0.0 2 3 0.014 1.3 0.8 0.0 127 137 114 124 102 134 0.82 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_21 - 188 N6_Mtase PF02384.11 311 8.3e-05 14.6 0.0 3 3 0.06 5.8 -1.3 0.0 213 230 168 185 167 186 0.88 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_65 - 144 TraG-D_C PF12696.2 128 3.5e-20 65.0 0.0 1 1 4.3e-22 4.2e-20 64.8 0.0 1 92 20 111 20 126 0.93 # 49542 # 49973 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 1_5 - 402 AAA_31 PF13614.1 157 3.4e-08 26.4 0.1 1 1 5.3e-08 5.1e-06 19.3 0.0 2 148 111 275 110 280 0.78 # 2195 # 3400 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_21 - 188 Methyltransf_26 PF13659.1 117 8.8e-14 44.5 0.1 1 1 3.3e-15 1.6e-13 43.6 0.1 2 114 52 147 51 150 0.90 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_12 - 218 Methyltransf_26 PF13659.1 117 2.1e-07 23.9 0.1 1 2 0.011 0.53 3.2 0.0 75 114 15 61 12 77 0.70 # 8931 # 9584 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.561 1_12 - 218 Methyltransf_26 PF13659.1 117 2.1e-07 23.9 0.1 2 2 1.9e-07 9.2e-06 18.6 0.0 4 44 157 196 154 212 0.82 # 8931 # 9584 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.561 1_68 - 1757 AAA_30 PF13604.1 196 2.3e-43 140.9 16.1 1 3 0.04 1.9 0.8 0.0 41 86 223 269 218 283 0.84 # 50541 # 55811 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_68 - 1757 AAA_30 PF13604.1 196 2.3e-43 140.9 16.1 2 3 2.3e-05 0.0011 11.4 3.8 7 147 420 552 416 562 0.84 # 50541 # 55811 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_68 - 1757 AAA_30 PF13604.1 196 2.3e-43 140.9 16.1 3 3 1.1e-42 5.1e-41 133.2 2.3 1 186 968 1156 968 1162 0.93 # 50541 # 55811 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_64 - 394 AAA_30 PF13604.1 196 0.00024 13.6 0.0 1 1 1.1e-05 0.00055 12.4 0.0 21 57 188 224 180 231 0.85 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_45 - 820 FtsK_SpoIIIE PF01580.13 205 9.2e-06 18.1 0.1 1 2 1.9e-06 0.00018 13.8 0.0 39 63 420 448 407 451 0.84 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_45 - 820 FtsK_SpoIIIE PF01580.13 205 9.2e-06 18.1 0.1 2 2 0.01 1 1.6 0.0 75 166 474 569 473 581 0.79 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_21 - 188 MTS PF05175.9 170 1.1e-08 27.5 0.0 1 1 1.5e-10 1.5e-08 27.1 0.0 31 141 50 149 39 166 0.84 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_21 - 188 Methyltrans_SAM PF10672.4 286 0.00094 10.9 0.0 1 1 1.3e-05 0.0013 10.4 0.0 196 261 113 173 99 177 0.78 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_21 - 188 Met_10 PF02475.11 200 0.0012 11.3 0.0 1 1 1.6e-05 0.0016 10.9 0.0 99 189 48 132 29 145 0.79 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_64 - 394 DAP3 PF10236.4 309 0.00084 11.1 0.0 1 1 1.4e-05 0.0014 10.4 0.0 24 65 186 227 180 240 0.79 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_68 - 1757 AAA_19 PF13245.1 76 9.2e-08 24.7 1.6 1 1 4.4e-09 4.3e-07 22.5 0.3 7 76 981 1047 974 1047 0.74 # 50541 # 55811 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_45 - 820 AAA_10 PF12846.2 304 1.6e-49 161.8 0.0 1 1 7.9e-51 2.6e-49 161.1 0.0 1 294 423 712 423 718 0.89 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_65 - 144 AAA_10 PF12846.2 304 1.3e-06 20.9 0.0 1 1 5e-08 1.6e-06 20.6 0.0 214 296 12 95 1 101 0.82 # 49542 # 49973 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 1_64 - 394 AAA_10 PF12846.2 304 4.2e-05 15.9 0.0 1 1 2.2e-06 7.1e-05 15.2 0.0 3 43 187 227 186 353 0.83 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_21 - 188 Methyltransf_31 PF13847.1 152 1.6e-06 20.7 0.0 1 1 2e-08 1.9e-06 20.4 0.0 5 119 52 162 48 183 0.83 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_64 - 394 TrwB_AAD_bind PF10412.4 386 1e-74 244.3 0.0 1 1 5.3e-76 1.3e-74 243.9 0.0 2 201 172 373 171 383 0.98 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_65 - 144 TrwB_AAD_bind PF10412.4 386 1.1e-46 152.0 0.0 1 1 4.9e-48 1.2e-46 151.9 0.0 225 345 1 121 1 137 0.95 # 49542 # 49973 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 1_66 - 129 TrwB_AAD_bind PF10412.4 386 7.5e-08 24.2 0.1 1 1 5.4e-09 1.3e-07 23.3 0.0 352 386 2 36 1 36 0.94 # 49919 # 50305 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.556 1_45 - 820 TrwB_AAD_bind PF10412.4 386 3.4e-07 22.0 0.1 1 2 8.8e-08 2.1e-06 19.4 0.0 15 53 423 461 414 491 0.80 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_45 - 820 TrwB_AAD_bind PF10412.4 386 3.4e-07 22.0 0.1 2 2 0.075 1.8 -0.2 0.0 261 317 657 713 627 716 0.92 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_68 - 1757 AAA_11 PF13086.1 236 0.00044 12.7 3.5 1 1 5.6e-06 0.00054 12.4 0.0 2 74 969 1038 968 1058 0.80 # 50541 # 55811 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_49 - 154 Sigma54_activ_2 PF14532.1 138 0.00012 15.0 0.0 1 1 2e-06 0.00019 14.3 0.0 55 109 54 110 3 122 0.68 # 36246 # 36707 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.374 1_65 - 144 T4SS-DNA_transf PF02534.9 469 6.2e-10 31.0 0.0 1 1 1.4e-11 7e-10 30.8 0.0 299 365 15 81 5 108 0.85 # 49542 # 49973 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 1_45 - 820 T4SS-DNA_transf PF02534.9 469 2.4e-05 15.9 0.0 1 2 0.0004 0.019 6.3 0.0 105 186 477 552 414 567 0.86 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_45 - 820 T4SS-DNA_transf PF02534.9 469 2.4e-05 15.9 0.0 2 2 0.0002 0.0097 7.3 0.0 319 378 655 713 607 715 0.90 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_21 - 188 TIGR00755 TIGR00755 256 3e-09 29.0 0.0 1 1 4.1e-11 3.9e-09 28.6 0.0 8 105 29 123 24 134 0.90 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_12 - 218 MethyltransfD12 PF02086.10 260 0.00071 11.9 0.0 1 1 1.7e-05 0.0016 10.7 0.0 7 46 142 179 141 188 0.84 # 8931 # 9584 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.561 1_45 - 820 Pox_A32 PF04665.7 241 0.00077 11.6 0.0 1 1 2.1e-05 0.0021 10.2 0.0 7 38 417 448 413 463 0.85 # 31760 # 34219 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.543 1_21 - 188 Methyltransf_23 PF13489.1 161 5.7e-05 15.7 0.0 1 1 7.6e-07 7.4e-05 15.4 0.0 10 120 39 153 27 175 0.78 # 15261 # 15824 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_64 - 394 AAA_28 PF13521.1 163 0.00082 12.2 0.0 1 1 1.5e-05 0.0015 11.4 0.0 2 38 188 229 187 253 0.79 # 48346 # 49527 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/188167e9-5a98-48d9-aeb6-f7e46b20d838 # Target file: checkm_output/bins/pn128/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn128/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/188167e9-5a98-48d9-aeb6-f7e46b20d838 checkm_output/bins/pn128/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:12:18 2020 # [ok]