# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 6_6 - 228 UPF0020 PF01170.13 180 3.5e-05 17.9 0.0 1 2 0.00026 0.078 7.0 0.0 103 123 17 37 4 88 0.71 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 6_6 - 228 UPF0020 PF01170.13 180 3.5e-05 17.9 0.0 2 2 6.2e-05 0.019 9.0 0.0 28 54 163 189 158 221 0.67 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 54_1 - 176 IstB_IS21 PF01695.12 178 4.4e-62 203.1 0.0 1 1 9.9e-64 5e-62 202.9 0.0 32 178 3 151 1 151 0.97 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_3 - 187 IstB_IS21 PF01695.12 178 5e-51 167.1 0.0 1 1 1.1e-52 5.8e-51 166.9 0.0 14 176 2 165 1 167 0.98 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 18_3 - 107 IstB_IS21 PF01695.12 178 4.3e-27 89.1 0.0 1 1 1e-28 5.2e-27 88.8 0.0 1 74 17 90 17 101 0.94 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 11_8 - 96 IstB_IS21 PF01695.12 178 2e-15 51.1 0.0 1 1 5.5e-17 2.8e-15 50.6 0.0 134 174 42 82 36 85 0.92 # 5368 # 5655 # -1 # ID=11_8;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 14_3 - 78 IstB_IS21 PF01695.12 178 1.5e-14 48.2 0.0 1 1 3.6e-16 1.8e-14 48.0 0.0 1 56 11 66 11 69 0.96 # 980 # 1213 # 1 # ID=14_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 24_1 - 78 IstB_IS21 PF01695.12 178 1.9e-14 47.9 0.0 1 1 4.6e-16 2.3e-14 47.6 0.0 1 56 11 66 11 69 0.96 # 284 # 517 # 1 # ID=24_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.496 8_1 - 400 MipZ PF09140.6 261 4e-08 27.1 0.1 1 2 0.0004 0.12 5.8 0.0 2 48 110 161 109 186 0.76 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 8_1 - 400 MipZ PF09140.6 261 4e-08 27.1 0.1 2 2 3.8e-08 1.1e-05 19.0 0.0 88 135 234 281 216 288 0.87 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 8_1 - 400 YhjQ PF06564.7 244 0.0015 12.3 0.7 1 3 0.076 23 -1.3 0.0 175 199 28 53 2 95 0.53 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 8_1 - 400 YhjQ PF06564.7 244 0.0015 12.3 0.7 2 3 0.038 11 -0.4 0.0 9 46 116 159 110 169 0.63 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 8_1 - 400 YhjQ PF06564.7 244 0.0015 12.3 0.7 3 3 3.7e-05 0.011 9.5 0.0 106 183 235 311 215 322 0.78 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 4_6 - 950 UvrD_C_2 PF13538.1 104 9.5e-08 26.6 0.7 1 1 1e-08 1.6e-06 22.7 0.7 46 104 451 553 409 553 0.73 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 2_7 - 1150 UvrD_C_2 PF13538.1 104 1.9e-07 25.7 0.7 1 2 0.027 4 2.1 0.0 6 42 620 656 616 687 0.75 # 3063 # 6512 # 1 # ID=2_7;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.603 2_7 - 1150 UvrD_C_2 PF13538.1 104 1.9e-07 25.7 0.7 2 2 4.6e-08 6.9e-06 20.7 0.2 3 102 734 837 732 839 0.77 # 3063 # 6512 # 1 # ID=2_7;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.603 1_12 - 431 DUF87 PF01935.12 229 0.00058 14.2 0.1 1 1 7e-06 0.0021 12.3 0.0 24 45 153 174 152 183 0.92 # 6405 # 7697 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.392 54_1 - 176 AAA_22 PF13401.1 131 2.7e-06 22.0 0.1 1 2 6.8e-05 0.0034 12.0 0.0 5 22 19 36 15 55 0.83 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 54_1 - 176 AAA_22 PF13401.1 131 2.7e-06 22.0 0.1 2 2 0.0011 0.054 8.1 0.0 88 103 70 97 42 119 0.66 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 4_6 - 950 AAA_22 PF13401.1 131 3.7e-05 18.4 0.0 1 2 0.00092 0.046 8.3 0.0 6 28 141 163 135 210 0.82 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 AAA_22 PF13401.1 131 3.7e-05 18.4 0.0 2 2 0.0033 0.16 6.5 0.0 74 124 301 349 266 355 0.73 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 7_3 - 187 AAA_22 PF13401.1 131 0.00012 16.7 0.4 1 1 0.0002 0.01 10.5 0.4 7 27 39 59 33 146 0.81 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_12 - 431 AAA_22 PF13401.1 131 0.00057 14.5 0.0 1 1 0.00014 0.007 11.0 0.0 9 66 157 235 151 280 0.70 # 6405 # 7697 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.392 18_3 - 107 AAA_22 PF13401.1 131 0.00065 14.3 0.0 1 1 3.2e-05 0.0016 13.1 0.0 5 21 64 80 60 99 0.83 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 5_9 - 436 AAA_22 PF13401.1 131 0.0052 11.4 1.2 1 1 0.00081 0.041 8.5 0.0 12 85 266 351 264 419 0.77 # 5823 # 7130 # -1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.560 13_4 - 87 Rad60-SLD PF11976.3 72 0.00032 14.8 0.1 1 1 1.5e-06 0.00046 14.3 0.1 12 39 41 68 33 77 0.83 # 1476 # 1736 # 1 # ID=13_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.418 6_6 - 228 N6_N4_Mtase PF01555.13 231 1.3e-36 120.6 0.0 1 1 1.8e-36 5.4e-34 112.1 0.0 1 228 21 200 21 203 0.91 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 7_3 - 187 AAA_17 PF13207.1 121 0.0015 13.9 0.1 1 1 1.9e-05 0.0028 12.9 0.1 2 77 39 105 38 150 0.62 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 18_3 - 107 AAA_17 PF13207.1 121 0.0029 12.9 0.0 1 1 3.4e-05 0.0051 12.1 0.0 2 17 66 81 65 101 0.86 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 8_1 - 400 ArsA_ATPase PF02374.10 305 0.0016 11.9 0.0 1 2 2.4e-05 0.0074 9.8 0.0 5 42 112 156 109 173 0.74 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 8_1 - 400 ArsA_ATPase PF02374.10 305 0.0016 11.9 0.0 2 2 0.068 21 -1.6 0.0 124 136 242 254 222 255 0.81 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 4_6 - 950 PhoH PF02562.11 205 1.9e-07 25.0 0.0 1 2 0.0033 0.34 4.6 0.0 22 37 142 157 131 166 0.83 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 PhoH PF02562.11 205 1.9e-07 25.0 0.0 2 2 3.7e-07 3.7e-05 17.5 0.0 122 173 317 369 309 394 0.83 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 18_3 - 107 PhoH PF02562.11 205 2.2e-07 24.8 0.0 1 1 4.5e-09 4.5e-07 23.7 0.0 11 51 55 96 43 100 0.77 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 54_1 - 176 PhoH PF02562.11 205 2.5e-07 24.6 0.0 1 1 6.3e-09 6.3e-07 23.3 0.0 11 48 10 47 2 78 0.84 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 18_3 - 107 Ras PF00071.17 162 0.0023 11.8 0.0 1 1 1.3e-05 0.0041 11.0 0.0 2 28 66 92 65 104 0.85 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 7_3 - 187 AFG1_ATPase PF03969.11 362 1.6e-05 18.3 0.0 1 1 1.2e-07 1.8e-05 18.1 0.0 45 168 19 139 4 183 0.84 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 54_1 - 176 AFG1_ATPase PF03969.11 362 0.00019 14.8 0.1 1 1 6.7e-06 0.001 12.4 0.1 66 215 22 169 10 175 0.72 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 50_2 - 155 Mur_ligase PF01225.20 83 0.001 13.6 0.0 1 1 5.1e-06 0.0015 13.1 0.0 8 49 60 107 58 135 0.78 # 282 # 746 # 1 # ID=50_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.535 2_11 - 81 Methyltransf_24 PF13578.1 106 0.0012 14.2 0.0 1 1 4.2e-06 0.0013 14.1 0.0 48 93 23 68 11 78 0.78 # 8486 # 8728 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 4_6 - 950 Zeta_toxin PF06414.7 201 0.00057 13.5 0.1 1 2 9.6e-06 0.0029 11.2 0.0 12 46 134 168 125 175 0.74 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 Zeta_toxin PF06414.7 201 0.00057 13.5 0.1 2 2 0.082 25 -1.7 0.0 55 91 607 637 601 642 0.73 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 1_35 - 364 RNA_pol_Rpb2_45 PF10385.4 66 0.00091 13.5 0.3 1 1 1.1e-05 0.0034 11.7 0.2 10 38 294 322 286 332 0.82 # 25696 # 26787 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 8_1 - 400 VirC1 PF07015.6 231 4.6e-05 17.0 0.0 1 2 0.0061 1.8 2.0 0.0 6 28 113 135 110 163 0.81 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 8_1 - 400 VirC1 PF07015.6 231 4.6e-05 17.0 0.0 2 2 3.1e-06 0.00095 12.7 0.0 51 136 210 297 206 344 0.87 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 1_12 - 431 Arch_ATPase PF01637.13 234 0.00015 16.0 0.0 1 1 4.6e-06 0.00035 14.8 0.0 11 129 143 253 138 264 0.63 # 6405 # 7697 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.392 7_3 - 187 Arch_ATPase PF01637.13 234 0.00021 15.5 0.2 1 2 0.00051 0.038 8.1 0.0 23 58 39 74 25 85 0.84 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 7_3 - 187 Arch_ATPase PF01637.13 234 0.00021 15.5 0.2 2 2 0.0013 0.1 6.7 0.1 97 152 79 127 70 137 0.71 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 54_1 - 176 Arch_ATPase PF01637.13 234 0.0012 13.0 0.1 1 1 7.9e-05 0.006 10.7 0.0 8 37 6 35 3 54 0.80 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 18_3 - 107 Arch_ATPase PF01637.13 234 0.0017 12.5 0.0 1 1 2.9e-05 0.0022 12.1 0.0 7 37 50 80 48 102 0.80 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 7_3 - 187 AAA_16 PF13191.1 185 3.9e-06 21.4 0.8 1 2 8.5e-06 0.00065 14.2 0.0 21 48 35 60 20 74 0.75 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 7_3 - 187 AAA_16 PF13191.1 185 3.9e-06 21.4 0.8 2 2 0.0024 0.18 6.2 0.1 131 169 76 122 62 135 0.60 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 4_6 - 950 AAA_16 PF13191.1 185 1.1e-05 20.0 0.2 1 1 7.7e-07 5.8e-05 17.6 0.0 23 173 138 338 118 347 0.56 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 54_1 - 176 AAA_16 PF13191.1 185 0.00017 16.1 0.1 1 1 4.3e-06 0.00032 15.2 0.1 15 41 12 35 3 117 0.82 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 18_3 - 107 AAA_16 PF13191.1 185 0.00018 16.0 0.0 1 1 4.1e-06 0.00031 15.2 0.0 12 41 54 80 46 84 0.74 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 31_3 - 173 AAA_23 PF13476.1 202 0.014 10.1 8.2 1 1 6.5e-05 0.02 9.7 8.2 122 197 12 84 2 89 0.47 # 1101 # 1619 # 1 # ID=31_3;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.499 8_1 - 400 CbiA PF01656.18 195 8.3e-22 72.0 0.0 1 1 4.5e-24 1.4e-21 71.3 0.0 1 144 111 294 111 321 0.74 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 4_6 - 950 AAA_14 PF13173.1 128 5.3e-07 24.1 0.0 1 2 4.6e-05 0.0069 10.8 0.0 4 45 141 180 138 206 0.85 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 AAA_14 PF13173.1 128 5.3e-07 24.1 0.0 2 2 0.00011 0.016 9.6 0.0 30 101 278 353 263 360 0.66 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 54_1 - 176 AAA_14 PF13173.1 128 1.8e-06 22.4 0.0 1 1 1.7e-08 2.5e-06 21.9 0.0 2 96 18 119 17 137 0.67 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_3 - 187 AAA_29 PF13555.1 62 1.8e-05 18.7 0.0 1 1 3.5e-07 3.5e-05 17.8 0.0 18 57 31 71 18 74 0.80 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 54_1 - 176 AAA_29 PF13555.1 62 0.0012 12.8 0.0 1 1 2.3e-05 0.0023 12.0 0.0 18 59 13 55 5 57 0.72 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 18_3 - 107 AAA_29 PF13555.1 62 0.002 12.1 0.0 1 1 3.4e-05 0.0034 11.4 0.0 18 39 58 79 50 84 0.77 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 7_3 - 187 CobA_CobO_BtuR PF02572.10 172 0.0022 12.1 0.7 1 2 0.051 15 -0.4 0.1 6 35 39 68 34 72 0.84 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 7_3 - 187 CobA_CobO_BtuR PF02572.10 172 0.0022 12.1 0.7 2 2 2.6e-05 0.0078 10.3 0.0 78 137 79 137 69 142 0.89 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 54_1 - 176 AAA PF00004.24 132 2.6e-07 25.4 0.0 1 1 3.8e-09 3.8e-07 24.8 0.0 1 74 21 96 21 130 0.77 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_3 - 187 AAA PF00004.24 132 0.00027 15.6 0.0 1 1 4.6e-06 0.00046 14.9 0.0 1 74 39 113 39 159 0.78 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 18_3 - 107 AAA PF00004.24 132 0.00066 14.4 0.0 1 1 1e-05 0.0011 13.7 0.0 1 30 66 95 66 103 0.78 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 54_1 - 176 Bac_DnaA PF00308.13 219 1.8e-09 32.0 0.0 1 1 2.6e-11 2.7e-09 31.4 0.0 37 136 21 118 13 123 0.87 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_3 - 187 Bac_DnaA PF00308.13 219 2.9e-09 31.3 0.0 1 1 3.9e-11 3.9e-09 30.9 0.0 37 138 39 137 21 144 0.89 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 18_3 - 107 Bac_DnaA PF00308.13 219 0.00039 14.6 0.0 1 1 4.9e-06 0.0005 14.2 0.0 36 64 65 93 35 99 0.79 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 4_6 - 950 UvrD_C PF13361.1 351 4e-08 27.5 0.0 1 2 0.0068 2.1 2.1 0.1 2 32 381 411 380 465 0.66 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 UvrD_C PF13361.1 351 4e-08 27.5 0.0 2 2 4.7e-09 1.4e-06 22.4 0.0 293 347 476 553 471 556 0.70 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 54_1 - 176 Sigma54_activat PF00158.21 168 0.0002 15.3 0.1 1 1 1.3e-05 0.0013 12.6 0.1 18 56 14 52 2 114 0.70 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_3 - 187 Sigma54_activat PF00158.21 168 0.0015 12.5 0.0 1 1 2.5e-05 0.0025 11.7 0.0 10 44 25 58 18 79 0.79 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 18_3 - 107 Sigma54_activat PF00158.21 168 0.0016 12.4 0.0 1 1 2.5e-05 0.0025 11.7 0.0 18 42 59 83 42 97 0.79 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 18_3 - 107 DUF258 PF03193.11 161 2.9e-05 17.8 0.0 1 1 3.5e-07 3.6e-05 17.5 0.0 21 53 49 81 30 99 0.75 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 54_1 - 176 DUF258 PF03193.11 161 4.4e-05 17.2 0.0 1 1 6e-07 6e-05 16.7 0.0 23 78 6 73 2 111 0.74 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_3 - 187 DUF258 PF03193.11 161 0.0032 11.1 0.0 1 1 3.9e-05 0.0039 10.8 0.0 24 57 24 58 5 102 0.82 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 8_1 - 400 AAA_31 PF13614.1 157 1.5e-07 25.9 0.1 1 2 0.00019 0.059 7.8 0.0 3 44 111 158 109 210 0.86 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 8_1 - 400 AAA_31 PF13614.1 157 1.5e-07 25.9 0.1 2 2 7e-07 0.00021 15.7 0.0 108 148 235 274 233 279 0.87 # 788 # 1987 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 54_1 - 176 NTPase_1 PF03266.10 168 0.00026 15.2 0.2 1 2 0.001 0.3 5.2 0.1 2 30 21 49 20 58 0.80 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 54_1 - 176 NTPase_1 PF03266.10 168 0.00026 15.2 0.2 2 2 0.00013 0.038 8.1 0.0 88 113 73 98 59 120 0.72 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 6_6 - 228 Methyltransf_26 PF13659.1 117 2e-11 38.5 0.1 1 2 1.5e-07 4.6e-05 17.9 0.0 57 114 7 71 2 74 0.72 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 6_6 - 228 Methyltransf_26 PF13659.1 117 2e-11 38.5 0.1 2 2 9.7e-08 2.9e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 2_7 - 1150 AAA_30 PF13604.1 196 1.3e-42 140.1 1.3 1 1 2.9e-44 4.3e-42 138.4 1.3 1 187 361 550 361 554 0.94 # 3063 # 6512 # 1 # ID=2_7;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.603 4_6 - 950 AAA_30 PF13604.1 196 0.00019 15.5 0.3 1 2 0.00064 0.097 6.7 0.0 7 35 133 156 127 189 0.72 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 AAA_30 PF13604.1 196 0.00019 15.5 0.3 2 2 0.0011 0.16 6.0 0.0 90 133 306 353 286 414 0.85 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 1_34 - 581 KH_4 PF13083.1 73 0.00043 14.4 0.3 1 2 3.4e-05 0.01 10.0 0.0 24 64 286 327 273 334 0.80 # 23934 # 25676 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.381 1_34 - 581 KH_4 PF13083.1 73 0.00043 14.4 0.3 2 2 0.019 5.8 1.2 0.1 38 46 432 440 428 441 0.90 # 23934 # 25676 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.381 31_3 - 173 AAA_27 PF13514.1 1111 0.0027 9.8 6.1 1 1 1.2e-05 0.0036 9.4 6.1 633 706 15 91 2 94 0.80 # 1101 # 1619 # 1 # ID=31_3;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.499 54_1 - 176 ABC_tran PF00005.22 137 0.00019 16.2 0.3 1 1 3e-05 0.0023 12.7 0.0 8 30 15 37 9 46 0.86 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_3 - 187 ABC_tran PF00005.22 137 0.0003 15.6 0.0 1 1 6.8e-06 0.00051 14.8 0.0 8 33 33 58 30 93 0.90 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 18_3 - 107 ABC_tran PF00005.22 137 0.00069 14.4 0.0 1 1 1.5e-05 0.0011 13.7 0.0 8 29 60 81 54 87 0.86 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_12 - 431 ABC_tran PF00005.22 137 0.00069 14.4 0.0 1 1 1.9e-05 0.0014 13.4 0.0 6 37 147 178 144 247 0.77 # 6405 # 7697 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.392 18_3 - 107 TIGR03263 TIGR03263 180 0.0021 11.9 0.0 1 2 0.074 22 -1.3 0.0 138 173 19 53 7 58 0.62 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 18_3 - 107 TIGR03263 TIGR03263 180 0.0021 11.9 0.0 2 2 1.8e-05 0.0054 10.5 0.0 4 33 66 95 63 100 0.84 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_12 - 431 ATP-synt_ab PF00006.20 215 8.2e-72 235.6 0.0 1 1 4.2e-74 1.3e-71 235.0 0.0 1 215 138 349 138 349 1.00 # 6405 # 7697 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.392 6_6 - 228 Cons_hypoth95 PF03602.10 183 3.8e-05 17.6 0.0 1 2 0.00039 0.12 6.2 0.0 112 146 18 54 9 81 0.65 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 6_6 - 228 Cons_hypoth95 PF03602.10 183 3.8e-05 17.6 0.0 2 2 4e-05 0.012 9.4 0.0 41 62 162 183 145 218 0.78 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 54_1 - 176 RuvB_N PF05496.7 234 0.00057 13.4 0.0 1 1 5.6e-06 0.00085 12.9 0.0 50 119 18 98 10 107 0.65 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_3 - 187 RuvB_N PF05496.7 234 0.0017 11.9 0.0 1 1 1.6e-05 0.0024 11.4 0.0 50 115 36 111 25 123 0.65 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 2_7 - 1150 AAA_19 PF13245.1 76 2e-07 25.2 0.3 1 1 1.1e-08 8.1e-07 23.2 0.3 7 76 374 440 367 440 0.74 # 3063 # 6512 # 1 # ID=2_7;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.603 54_1 - 176 AAA_19 PF13245.1 76 0.00069 13.8 0.0 1 1 2.1e-05 0.0016 12.7 0.0 10 37 19 45 12 76 0.81 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 4_6 - 950 AAA_19 PF13245.1 76 0.0013 13.0 0.0 1 1 5.2e-05 0.0039 11.4 0.0 9 35 137 164 132 188 0.77 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 18_3 - 107 AAA_19 PF13245.1 76 0.0018 12.6 0.0 1 1 4e-05 0.0031 11.8 0.0 10 30 64 83 57 93 0.80 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 7_3 - 187 AAA_10 PF12846.2 304 1.4e-05 19.1 0.0 1 1 2.2e-07 1.6e-05 18.9 0.0 3 32 38 67 36 142 0.76 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 54_1 - 176 AAA_10 PF12846.2 304 2.4e-05 18.3 0.1 1 2 2.8e-06 0.00021 15.2 0.0 1 33 18 50 18 57 0.92 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 54_1 - 176 AAA_10 PF12846.2 304 2.4e-05 18.3 0.1 2 2 0.054 4.1 1.2 0.0 202 247 58 108 51 118 0.68 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 18_3 - 107 AAA_10 PF12846.2 304 0.00053 13.9 0.1 1 2 0.082 6.2 0.6 0.0 130 169 2 43 1 57 0.66 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 18_3 - 107 AAA_10 PF12846.2 304 0.00053 13.9 0.1 2 2 3.8e-05 0.0028 11.5 0.0 1 24 63 86 63 94 0.86 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_12 - 431 AAA_10 PF12846.2 304 0.0007 13.5 0.1 1 1 2.8e-05 0.0021 12.0 0.1 5 51 156 208 153 424 0.71 # 6405 # 7697 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.392 4_6 - 950 AAA_12 PF13087.1 200 2.5e-05 18.2 0.0 1 2 9.5e-05 0.029 8.2 0.1 3 90 365 451 364 466 0.77 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 AAA_12 PF13087.1 200 2.5e-05 18.2 0.0 2 2 9.6e-05 0.029 8.2 0.0 143 196 465 553 423 556 0.68 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 54_1 - 176 ResIII PF04851.10 184 0.00054 14.3 0.0 1 2 8.3e-05 0.013 9.8 0.0 8 51 5 44 2 60 0.72 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 54_1 - 176 ResIII PF04851.10 184 0.00054 14.3 0.0 2 2 0.0079 1.2 3.4 0.0 112 163 47 97 44 120 0.71 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 18_3 - 107 ResIII PF04851.10 184 0.0018 12.6 0.0 1 1 1.7e-05 0.0026 12.1 0.0 8 51 50 89 11 99 0.79 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 4_6 - 950 Viral_helicase1 PF01443.13 234 3.7e-12 40.7 1.6 1 3 0.0014 0.21 5.5 0.0 2 23 143 166 142 204 0.79 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 Viral_helicase1 PF01443.13 234 3.7e-12 40.7 1.6 2 3 1.3e-10 2e-08 28.5 0.2 35 202 288 490 270 498 0.82 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 Viral_helicase1 PF01443.13 234 3.7e-12 40.7 1.6 3 3 0.004 0.61 4.0 0.0 212 232 532 552 524 554 0.75 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 2_7 - 1150 Viral_helicase1 PF01443.13 234 0.00077 13.5 0.0 1 2 0.00033 0.05 7.5 0.0 1 23 381 404 381 585 0.74 # 3063 # 6512 # 1 # ID=2_7;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.603 2_7 - 1150 Viral_helicase1 PF01443.13 234 0.00077 13.5 0.0 2 2 0.0058 0.87 3.5 0.0 165 234 774 840 723 840 0.61 # 3063 # 6512 # 1 # ID=2_7;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.603 4_6 - 950 DUF2075 PF09848.4 352 5.2e-07 23.4 2.0 1 3 0.00041 0.12 5.7 0.0 5 25 143 163 141 214 0.78 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 DUF2075 PF09848.4 352 5.2e-07 23.4 2.0 2 3 3.1e-05 0.0092 9.4 0.0 76 224 307 455 245 465 0.79 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 DUF2075 PF09848.4 352 5.2e-07 23.4 2.0 3 3 0.00038 0.12 5.8 0.0 316 349 521 553 510 556 0.77 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 7_3 - 187 DUF815 PF05673.8 250 1.1e-07 25.5 0.0 1 1 4.5e-10 1.4e-07 25.2 0.0 19 124 7 114 2 138 0.73 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 6_1 - 125 Methyltransf_27 PF13708.1 194 0.00045 14.3 0.1 1 1 2e-06 0.00059 13.9 0.1 16 69 18 71 3 108 0.85 # 221 # 595 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.419 2_7 - 1150 AAA_11 PF13086.1 236 0.00012 16.2 2.4 1 2 1.7e-06 0.0005 14.1 0.0 2 75 362 432 361 452 0.80 # 3063 # 6512 # 1 # ID=2_7;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.603 2_7 - 1150 AAA_11 PF13086.1 236 0.00012 16.2 2.4 2 2 0.096 29 -1.5 0.0 198 232 462 499 435 503 0.74 # 3063 # 6512 # 1 # ID=2_7;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.603 6_6 - 228 MethyltransfD12 PF02086.10 260 0.0013 12.6 0.0 1 2 0.015 4.6 1.0 0.0 175 188 18 31 8 92 0.82 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 6_6 - 228 MethyltransfD12 PF02086.10 260 0.0013 12.6 0.0 2 2 4e-05 0.012 9.5 0.0 20 46 163 189 148 197 0.78 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 4_6 - 950 Pox_A32 PF04665.7 241 0.0012 12.6 0.0 1 1 9.1e-06 0.0028 11.4 0.0 6 34 132 160 127 173 0.86 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 7_3 - 187 RNA_helicase PF00910.17 107 0.00013 16.6 0.0 1 1 2.1e-06 0.00064 14.4 0.0 1 74 39 123 39 126 0.76 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 18_3 - 107 AAA_24 PF13479.1 213 0.0016 12.5 0.0 1 1 1.4e-05 0.0021 12.1 0.0 3 23 63 83 61 96 0.82 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 54_1 - 176 AAA_24 PF13479.1 213 0.0017 12.4 0.1 1 1 4.2e-05 0.0064 10.5 0.0 3 21 18 36 16 43 0.84 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 4_6 - 950 UvrD-helicase PF00580.16 315 2.3e-10 34.7 0.8 1 2 3.6e-05 0.011 9.5 0.0 9 34 135 160 128 166 0.77 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 4_6 - 950 UvrD-helicase PF00580.16 315 2.3e-10 34.7 0.8 2 2 3.8e-09 1.1e-06 22.5 0.1 253 296 311 354 284 358 0.87 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 7_3 - 187 NACHT PF05729.7 166 0.00047 14.3 0.3 1 2 0.0001 0.01 9.9 0.1 3 24 39 60 37 72 0.86 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 7_3 - 187 NACHT PF05729.7 166 0.00047 14.3 0.3 2 2 0.017 1.7 2.7 0.0 72 128 88 138 66 156 0.74 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 4_6 - 950 NACHT PF05729.7 166 0.0013 12.9 0.2 1 1 7.9e-05 0.008 10.3 0.0 3 27 142 166 140 200 0.81 # 4701 # 7550 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.509 54_1 - 176 NACHT PF05729.7 166 0.002 12.3 0.2 1 1 5.4e-05 0.0054 10.8 0.2 3 28 21 46 19 155 0.75 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_3 - 187 AAA_25 PF13481.1 194 2.1e-05 18.4 0.2 1 1 4.3e-07 4.3e-05 17.4 0.1 28 58 31 61 7 103 0.85 # 880 # 1440 # 1 # ID=7_3;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 18_3 - 107 AAA_25 PF13481.1 194 6.4e-05 16.9 0.0 1 1 8e-07 8e-05 16.5 0.0 20 55 49 85 31 90 0.79 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 54_1 - 176 AAA_25 PF13481.1 194 7.1e-05 16.7 0.0 1 1 1.1e-06 0.00011 16.0 0.0 29 58 14 43 1 89 0.80 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 6_6 - 228 Methyltransf_15 PF09445.5 164 0.0023 11.9 0.0 1 2 0.042 13 -0.2 0.0 53 79 4 29 2 33 0.90 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 6_6 - 228 Methyltransf_15 PF09445.5 164 0.0023 11.9 0.0 2 2 4.2e-05 0.013 9.5 0.0 3 31 166 194 164 209 0.86 # 3852 # 4535 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.558 54_1 - 176 AAA_28 PF13521.1 163 0.002 12.6 0.2 1 1 1.1e-05 0.0033 11.9 0.2 1 44 20 68 20 140 0.83 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 54_1 - 176 AAA_5 PF07728.9 139 4.6e-05 17.6 0.1 1 2 2.8e-06 0.00042 14.5 0.2 1 74 20 89 20 110 0.76 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 54_1 - 176 AAA_5 PF07728.9 139 4.6e-05 17.6 0.1 2 2 0.096 15 -0.2 0.0 102 123 152 174 124 175 0.65 # 67 # 594 # -1 # ID=54_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 18_3 - 107 AAA_5 PF07728.9 139 0.0019 12.4 0.1 1 1 3e-05 0.0046 11.2 0.1 1 16 65 80 65 85 0.89 # 1024 # 1344 # 1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/573616c4-69cf-48ca-86a0-e6d5becceaba # Target file: checkm_output/bins/pn115/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn115/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/573616c4-69cf-48ca-86a0-e6d5becceaba checkm_output/bins/pn115/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:12:11 2020 # [ok]