#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_2                  -            336 AAA_15               PF13175.1    415     3e-20   61.2  40.0   1   2   2.3e-06   1.2e-05   13.1  17.1    11    83     9   123     3   132 0.67 # 1197 # 2204 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.321
1_2                  -            336 AAA_15               PF13175.1    415     3e-20   61.2  40.0   2   2   2.9e-16   1.4e-15   45.8  29.4   247   415    86   315    71   315 0.64 # 1197 # 2204 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.321
1_2                  -            336 AAA_21               PF13304.1    303   1.1e-26   83.1  13.5   1   1   2.9e-27   1.5e-26   82.6  13.5     1   302    26   316    26   317 0.62 # 1197 # 2204 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.321
1_2                  -            336 SMC_N                PF02463.14   220   4.1e-10   27.8  13.9   1   1   4.4e-09   2.2e-08   22.2  13.9     3   203     6   316     4   330 0.79 # 1197 # 2204 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.321
1_2                  -            336 AAA_29               PF13555.1     62     3e-06   15.5   0.0   1   1   1.2e-06   6.2e-06   14.5   0.0    18    55    20    56    10    63 0.72 # 1197 # 2204 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.321
1_2                  -            336 DUF258               PF03193.11   161   5.7e-06   14.3   0.0   1   1   2.8e-06   1.4e-05   13.0   0.0    31    60    20    49     3    77 0.83 # 1197 # 2204 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.321
1_2                  -            336 ABC_tran             PF00005.22   137   1.1e-09   27.5   9.6   1   1   1.6e-08     8e-08   21.4   9.6    11   135    24   280    14   281 0.64 # 1197 # 2204 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.321
1_2                  -            336 NACHT                PF05729.7    166   3.4e-06   15.5   0.0   1   1   1.4e-06   6.9e-06   14.5   0.0     3    76    27   105    25   129 0.76 # 1197 # 2204 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.321
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/16ee59f2-5c98-4273-a57c-b7027cba3949
# Target file:     checkm_output/bins/pn112/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pn112/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/16ee59f2-5c98-4273-a57c-b7027cba3949 checkm_output/bins/pn112/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 17:12:06 2020
# [ok]