# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_68 - 722 UPF0020 PF01170.13 180 4.3e-08 26.0 0.0 1 1 7.3e-10 8e-08 25.1 0.0 30 122 229 327 225 334 0.75 # 55955 # 58120 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_54 - 396 ABC_ATPase PF09818.4 448 0.00027 12.6 0.0 1 1 4e-06 0.00044 11.9 0.0 244 274 165 195 159 206 0.93 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_7 - 189 SRP_SPB PF02978.14 104 0.0015 11.8 0.0 1 2 0.00061 0.067 6.6 0.0 73 99 16 42 1 45 0.81 # 5297 # 5863 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.545 1_7 - 189 SRP_SPB PF02978.14 104 0.0015 11.8 0.0 2 2 0.0066 0.73 3.2 0.0 76 101 112 137 97 140 0.89 # 5297 # 5863 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.545 1_109 - 209 MipZ PF09140.6 261 1.9e-21 69.3 0.5 1 2 1.2e-12 1.3e-10 33.8 0.0 2 53 2 52 1 60 0.89 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_109 - 209 MipZ PF09140.6 261 1.9e-21 69.3 0.5 2 2 1.6e-12 1.7e-10 33.4 0.0 87 140 65 118 58 128 0.92 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_109 - 209 YhjQ PF06564.7 244 2.6e-05 16.7 0.3 1 2 1.8e-06 0.0002 13.8 0.3 4 38 3 37 1 50 0.89 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_109 - 209 YhjQ PF06564.7 244 2.6e-05 16.7 0.3 2 2 0.029 3.2 0.0 0.0 108 144 69 103 44 113 0.78 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_36 - 731 DUF87 PF01935.12 229 0.00035 13.4 0.2 1 1 9.9e-06 0.0011 11.8 0.0 13 38 127 151 120 159 0.85 # 22136 # 24328 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_54 - 396 AAA_22 PF13401.1 131 3.5e-06 20.2 0.0 1 1 1.3e-07 6.9e-06 19.3 0.0 3 28 164 189 159 296 0.60 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_43 - 1016 AAA_22 PF13401.1 131 0.0004 13.6 0.0 1 1 6.8e-05 0.0038 10.4 0.0 8 27 497 516 490 566 0.87 # 31612 # 34659 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_54 - 396 ATP_bind_1 PF03029.12 238 0.0012 11.5 0.0 1 1 2e-05 0.0023 10.5 0.0 1 22 170 191 170 198 0.91 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_109 - 209 SRP54 PF00448.17 196 2.8e-07 23.2 0.1 1 1 1.5e-08 1.7e-06 20.7 0.1 4 98 2 91 1 134 0.80 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_100 - 237 AAA_15 PF13175.1 415 6e-09 28.4 0.0 1 1 7.2e-11 8e-09 28.0 0.0 2 46 5 48 4 67 0.90 # 89993 # 90703 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_109 - 209 AAA_17 PF13207.1 121 2.4e-05 18.2 0.0 1 1 4.2e-07 4.7e-05 17.3 0.0 9 77 11 84 9 205 0.76 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_100 - 237 AAA_21 PF13304.1 303 1.4e-05 18.2 0.0 1 1 4.6e-07 2.5e-05 17.3 0.0 2 24 27 49 27 83 0.83 # 89993 # 90703 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_54 - 396 AAA_21 PF13304.1 303 0.00052 13.0 0.0 1 1 1.4e-05 0.00079 12.4 0.0 3 24 169 190 167 219 0.75 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_54 - 396 Miro PF08477.8 119 0.00062 13.3 0.0 1 1 1.3e-05 0.0014 12.2 0.0 4 35 170 200 169 256 0.76 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_109 - 209 MobB PF03205.9 140 6.5e-05 15.7 0.1 1 1 3.2e-06 0.00018 14.3 0.0 10 42 11 41 1 46 0.79 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_54 - 396 MobB PF03205.9 140 0.00081 12.2 0.0 1 1 2.6e-05 0.0015 11.3 0.0 4 25 169 190 167 196 0.89 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_109 - 209 ArsA_ATPase PF02374.10 305 3.4e-08 25.8 0.4 1 2 1.2e-09 1.3e-07 24.0 0.1 3 48 3 48 1 69 0.85 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_109 - 209 ArsA_ATPase PF02374.10 305 3.4e-08 25.8 0.4 2 2 0.053 5.9 -1.2 0.0 121 135 69 85 47 86 0.75 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_54 - 396 T2SE PF00437.15 272 2.8e-35 114.5 0.0 1 1 3.4e-37 3.8e-35 114.1 0.0 9 270 35 315 28 317 0.86 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_41 - 194 TIGR00810 TIGR00810 73 0.0063 9.4 9.9 1 2 3.9e-05 0.0043 9.9 0.8 49 70 96 117 95 120 0.87 # 29827 # 30408 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 1_41 - 194 TIGR00810 TIGR00810 73 0.0063 9.4 9.9 2 2 0.0034 0.37 3.7 2.6 48 71 124 147 122 149 0.85 # 29827 # 30408 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 1_100 - 237 SMC_N PF02463.14 220 2.9e-10 32.7 0.0 1 1 3.9e-12 4.3e-10 32.2 0.0 2 71 4 69 3 79 0.85 # 89993 # 90703 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_109 - 209 VirC1 PF07015.6 231 3e-09 29.3 0.0 1 1 5.9e-11 6.5e-09 28.2 0.0 3 172 2 164 1 206 0.75 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_109 - 209 Fer4_NifH PF00142.13 273 8.2e-05 14.9 0.0 1 1 2.3e-06 0.00025 13.3 0.0 8 38 9 39 2 46 0.89 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_36 - 731 tRNA_U5-meth_tr PF05958.6 352 0.00071 11.3 0.3 1 1 1e-05 0.0012 10.6 0.3 108 171 237 300 208 303 0.84 # 22136 # 24328 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_54 - 396 AAA_16 PF13191.1 185 6.4e-05 16.0 0.0 1 1 1.3e-06 0.00014 14.9 0.0 27 81 168 240 156 322 0.69 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_100 - 237 AAA_23 PF13476.1 202 1.8e-11 37.8 0.0 1 1 3.2e-13 1.8e-11 37.8 0.0 1 53 6 58 6 202 0.88 # 89993 # 90703 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_54 - 396 AAA_23 PF13476.1 202 5.1e-07 23.2 0.0 1 1 1.7e-08 9.3e-07 22.4 0.0 18 40 164 186 149 226 0.86 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_109 - 209 CbiA PF01656.18 195 2.6e-22 72.2 0.0 1 1 4.7e-24 5.2e-22 71.2 0.0 1 154 3 137 3 178 0.78 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_83 - 85 HI0933_like PF03486.9 409 0.00093 10.7 0.0 1 1 9e-06 0.00099 10.6 0.0 75 126 5 57 1 65 0.86 # 76145 # 76399 # -1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.467 1_100 - 237 AAA_29 PF13555.1 62 6e-08 25.2 0.0 1 1 1.8e-09 1e-07 24.5 0.0 2 49 5 50 4 57 0.82 # 89993 # 90703 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_54 - 396 AAA_29 PF13555.1 62 1.6e-06 20.6 0.0 1 1 7.5e-08 4.1e-06 19.3 0.0 23 43 166 185 158 193 0.86 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_43 - 1016 MMR_HSR1 PF01926.18 116 0.00057 12.9 0.0 1 1 1.3e-05 0.0014 11.6 0.0 3 27 497 518 495 535 0.83 # 31612 # 34659 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_68 - 722 N6_Mtase PF02384.11 311 2.2e-54 177.6 0.0 1 1 2.8e-56 3.1e-54 177.1 0.0 3 276 177 489 175 508 0.84 # 55955 # 58120 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_109 - 209 AAA_31 PF13614.1 157 4.7e-06 19.7 0.0 1 2 2.5e-07 2.8e-05 17.1 0.0 2 42 2 42 1 55 0.88 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_109 - 209 AAA_31 PF13614.1 157 4.7e-06 19.7 0.0 2 2 0.055 6 -0.2 0.0 109 127 68 86 62 113 0.68 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_68 - 722 Methyltransf_26 PF13659.1 117 9.7e-11 34.8 0.0 1 1 2e-12 2.2e-10 33.7 0.0 5 86 232 327 229 390 0.77 # 55955 # 58120 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_54 - 396 FtsK_SpoIIIE PF01580.13 205 3.6e-05 16.3 0.0 1 1 1.3e-06 7.3e-05 15.3 0.0 41 66 168 192 145 197 0.83 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_43 - 1016 FtsK_SpoIIIE PF01580.13 205 0.001 11.6 0.0 1 1 3.6e-05 0.002 10.6 0.0 18 59 474 514 456 530 0.67 # 31612 # 34659 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_100 - 237 DUF2813 PF11398.3 373 6.8e-05 15.0 0.3 1 2 2e-06 0.00022 13.4 0.0 11 49 12 51 3 56 0.79 # 89993 # 90703 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_100 - 237 DUF2813 PF11398.3 373 6.8e-05 15.0 0.3 2 2 0.041 4.5 -0.8 0.1 94 148 126 180 118 226 0.52 # 89993 # 90703 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_54 - 396 ABC_tran PF00005.22 137 3.4e-05 17.2 0.0 1 1 1.8e-06 6.6e-05 16.3 0.0 16 34 170 188 162 221 0.87 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_100 - 237 ABC_tran PF00005.22 137 0.0001 15.7 0.0 1 1 4.3e-06 0.00016 15.1 0.0 15 113 28 155 18 173 0.74 # 89993 # 90703 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_43 - 1016 ABC_tran PF00005.22 137 0.00065 13.1 0.0 1 1 6.1e-05 0.0022 11.3 0.0 13 33 495 515 487 525 0.85 # 31612 # 34659 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_68 - 722 Cons_hypoth95 PF03602.10 183 0.00031 13.2 0.0 1 2 1.2e-05 0.0013 11.1 0.0 72 152 268 347 263 360 0.82 # 55955 # 58120 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_68 - 722 Cons_hypoth95 PF03602.10 183 0.00031 13.2 0.0 2 2 0.096 11 -1.6 0.0 132 158 595 621 587 629 0.81 # 55955 # 58120 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_68 - 722 Eco57I PF07669.6 106 2.8e-05 17.5 0.0 1 1 5e-06 0.00055 13.4 0.0 2 103 311 441 310 444 0.77 # 55955 # 58120 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_109 - 209 AAA_19 PF13245.1 76 0.00062 12.6 0.1 1 2 0.00019 0.011 8.6 0.0 20 48 11 35 9 44 0.84 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_109 - 209 AAA_19 PF13245.1 76 0.00062 12.6 0.1 2 2 0.044 2.4 1.1 0.0 42 62 135 155 118 180 0.75 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_54 - 396 AAA_19 PF13245.1 76 0.00066 12.5 0.3 1 1 3.4e-05 0.0019 11.1 0.3 10 37 165 192 156 260 0.79 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_13 - 327 Methyltransf_2 PF00891.13 242 0.00012 14.4 0.0 1 1 2.2e-06 0.00024 13.4 0.0 69 112 241 284 222 297 0.86 # 8335 # 9315 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.499 1_43 - 1016 AAA_10 PF12846.2 304 1.3e-35 116.3 0.0 1 1 6.6e-37 1.8e-35 115.8 0.0 5 301 497 894 493 897 0.93 # 31612 # 34659 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_36 - 731 AAA_10 PF12846.2 304 6.8e-11 35.1 0.6 1 1 8e-12 2.2e-10 33.4 0.6 60 294 217 508 136 518 0.67 # 22136 # 24328 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_54 - 396 AAA_10 PF12846.2 304 5.1e-05 15.8 0.0 1 1 4.4e-06 0.00012 14.6 0.0 3 28 167 192 165 207 0.86 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_109 - 209 AAA_10 PF12846.2 304 0.00017 14.1 0.0 1 1 1e-05 0.00028 13.4 0.0 11 39 11 39 3 67 0.90 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_43 - 1016 DUF2075 PF09848.4 352 0.0013 10.7 0.0 1 1 2.1e-05 0.0023 9.9 0.0 3 32 495 524 493 558 0.74 # 31612 # 34659 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_21 - 287 Methyltransf_27 PF13708.1 194 2.3e-69 225.8 0.0 1 1 2.7e-71 3e-69 225.5 0.0 2 194 89 282 88 282 0.98 # 12747 # 13607 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_36 - 731 TrwB_AAD_bind PF10412.4 386 5.1e-11 34.8 1.1 1 3 3.2e-05 0.0035 9.0 0.0 11 37 132 158 126 175 0.81 # 22136 # 24328 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_36 - 731 TrwB_AAD_bind PF10412.4 386 5.1e-11 34.8 1.1 2 3 0.0012 0.13 3.8 0.2 90 170 235 307 219 323 0.67 # 22136 # 24328 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_36 - 731 TrwB_AAD_bind PF10412.4 386 5.1e-11 34.8 1.1 3 3 2.8e-08 3.1e-06 19.0 0.0 259 338 452 532 425 571 0.73 # 22136 # 24328 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_43 - 1016 RNA_helicase PF00910.17 107 0.00078 12.7 0.0 1 1 3.3e-05 0.0036 10.6 0.0 2 25 497 520 497 537 0.85 # 31612 # 34659 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_7 - 189 Terminase_GpA PF05876.7 557 0.00021 12.7 0.3 1 2 0.069 7.6 -2.3 0.3 230 243 50 63 31 83 0.65 # 5297 # 5863 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.545 1_7 - 189 Terminase_GpA PF05876.7 557 0.00021 12.7 0.3 2 2 1.9e-06 0.00021 12.7 0.3 165 241 107 174 99 180 0.87 # 5297 # 5863 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.545 1_61 - 178 TIGR00922 TIGR00922 172 5.1e-06 19.1 0.0 1 1 8.7e-08 9.6e-06 18.3 0.0 34 96 28 92 4 106 0.75 # 48401 # 48934 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_43 - 1016 NACHT PF05729.7 166 8.6e-05 15.3 0.0 1 2 5.7e-05 0.0031 10.2 0.0 3 38 496 527 494 562 0.79 # 31612 # 34659 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_43 - 1016 NACHT PF05729.7 166 8.6e-05 15.3 0.0 2 2 0.017 0.96 2.1 0.0 33 62 830 860 815 878 0.83 # 31612 # 34659 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_54 - 396 NACHT PF05729.7 166 0.00022 14.0 0.0 1 1 1e-05 0.00057 12.6 0.0 4 30 169 195 167 200 0.87 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_54 - 396 AAA_25 PF13481.1 194 7.3e-06 18.5 0.0 1 1 2.2e-07 1.2e-05 17.8 0.0 24 58 156 190 128 267 0.85 # 44188 # 45375 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_109 - 209 AAA_25 PF13481.1 194 0.00015 14.3 0.1 1 1 6.2e-06 0.00034 13.1 0.0 42 87 10 44 3 90 0.78 # 95489 # 96115 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/c4d94d62-786a-4dc8-80bd-e5506c243deb # Target file: checkm_output/bins/pm996/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm996/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c4d94d62-786a-4dc8-80bd-e5506c243deb checkm_output/bins/pm996/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:11:59 2020 # [ok]