# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_35 - 488 Mg_chelatase PF01078.16 207 0.001 12.0 0.1 1 1 1.1e-05 0.002 11.0 0.1 1 47 215 267 215 281 0.79 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_4 - 372 ATP_bind_3 PF01171.15 182 0.00031 14.0 0.0 1 2 6.3e-05 0.011 8.9 0.0 1 59 52 110 52 123 0.78 # 2580 # 3695 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_4 - 372 ATP_bind_3 PF01171.15 182 0.00031 14.0 0.0 2 2 0.005 0.87 2.7 0.0 134 161 232 260 207 262 0.72 # 2580 # 3695 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 4_8 - 258 Methyltransf_12 PF08242.7 99 9.5e-06 19.8 0.0 1 1 1.2e-07 2e-05 18.7 0.0 1 82 111 188 111 199 0.85 # 7012 # 7785 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.302 4_5 - 492 cobW PF02492.14 178 0.00046 13.3 1.3 1 2 0.0051 0.89 2.6 0.0 3 19 33 49 31 59 0.87 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 cobW PF02492.14 178 0.00046 13.3 1.3 2 2 6.1e-05 0.011 8.9 0.3 3 28 325 349 323 352 0.80 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.045 7.5 46.3 1 5 0.019 3.3 1.5 8.8 39 98 89 152 77 158 0.72 # 14186 # 15226 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.045 7.5 46.3 2 5 0.00084 0.15 5.9 3.1 50 100 146 196 143 199 0.89 # 14186 # 15226 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.045 7.5 46.3 3 5 2.6e-06 0.00045 13.9 12.2 19 100 216 294 201 297 0.85 # 14186 # 15226 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.045 7.5 46.3 4 5 0.00031 0.053 7.3 2.1 62 105 284 327 282 330 0.90 # 14186 # 15226 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.045 7.5 46.3 5 5 0.0059 1 3.1 1.6 82 105 304 327 296 345 0.51 # 14186 # 15226 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 1_52 - 262 MipZ PF09140.6 261 3.1e-10 33.2 0.0 1 2 1.3e-09 1.1e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 29090 # 29875 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_52 - 262 MipZ PF09140.6 261 3.1e-10 33.2 0.0 2 2 0.00063 0.055 6.2 0.0 89 122 117 150 89 166 0.74 # 29090 # 29875 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_14 - 402 MipZ PF09140.6 261 3.3e-06 20.0 0.0 1 2 0.0053 0.47 3.1 0.0 3 50 111 163 109 193 0.73 # 9154 # 10359 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_14 - 402 MipZ PF09140.6 261 3.3e-06 20.0 0.0 2 2 1.7e-06 0.00015 14.6 0.0 87 136 233 282 220 296 0.87 # 9154 # 10359 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_28 - 562 3HCDH_N PF02737.13 180 0.028 7.7 6.6 1 2 0.0086 1.5 2.1 2.8 1 30 100 129 100 133 0.93 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 3HCDH_N PF02737.13 180 0.028 7.7 6.6 2 2 0.0003 0.052 6.9 0.1 2 36 273 307 272 359 0.75 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 GIDA PF01134.17 392 4.5e-06 19.4 5.3 1 2 2.6e-08 4.5e-06 19.4 5.3 1 53 100 154 100 290 0.87 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 GIDA PF01134.17 392 4.5e-06 19.4 5.3 2 2 0.01 1.8 1.0 0.3 349 385 390 426 376 430 0.79 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_14 - 504 UvrD_C_2 PF13538.1 104 1.3e-10 35.0 0.0 1 1 3.5e-12 6.1e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 2_28 - 562 Pyr_redox_2 PF07992.9 201 1.2e-42 139.7 0.0 1 1 1.6e-44 2.8e-42 138.6 0.0 1 199 100 407 100 409 0.96 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_35 - 488 AAA_2 PF07724.9 171 6.1e-06 19.9 0.0 1 1 1.9e-07 3.4e-05 17.5 0.0 6 92 245 325 240 333 0.90 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 4_5 - 492 DUF87 PF01935.12 229 0.024 8.1 11.6 1 4 0.0013 0.22 4.9 0.0 25 48 32 55 20 62 0.86 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 DUF87 PF01935.12 229 0.024 8.1 11.6 2 4 0.063 11 -0.6 1.7 115 174 205 266 179 295 0.51 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 DUF87 PF01935.12 229 0.024 8.1 11.6 3 4 0.00099 0.17 5.3 0.3 25 46 324 345 321 357 0.88 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 DUF87 PF01935.12 229 0.024 8.1 11.6 4 4 0.0088 1.5 2.2 0.1 40 196 415 472 368 486 0.56 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_22 PF13401.1 131 3e-08 27.6 0.8 1 2 0.0076 0.44 4.4 0.0 9 25 35 51 30 144 0.78 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_22 PF13401.1 131 3e-08 27.6 0.8 2 2 6.1e-08 3.6e-06 20.9 0.0 7 125 325 464 322 471 0.86 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 3_14 - 504 AAA_22 PF13401.1 131 5.7e-05 17.0 0.0 1 2 8e-05 0.0047 10.8 0.0 8 68 23 92 17 122 0.63 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 3_14 - 504 AAA_22 PF13401.1 131 5.7e-05 17.0 0.0 2 2 0.015 0.87 3.4 0.0 82 124 189 225 164 229 0.77 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 1_35 - 488 AAA_22 PF13401.1 131 0.00083 13.2 1.1 1 1 0.00089 0.052 7.4 0.8 69 121 283 344 243 354 0.66 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_2 - 296 ChlI PF13541.1 121 1.5e-06 21.4 0.1 1 1 2e-08 3.5e-06 20.3 0.0 62 120 202 260 168 261 0.89 # 696 # 1583 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.462 4_5 - 492 PRK PF00485.13 194 0.0005 13.3 0.2 1 2 0.0023 0.41 3.8 0.0 2 21 33 52 32 85 0.83 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 PRK PF00485.13 194 0.0005 13.3 0.2 2 2 0.00027 0.047 6.9 0.0 2 33 325 364 325 409 0.75 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_63 - 476 DNA_methylase PF00145.12 335 1e-10 34.9 0.0 1 2 2.1e-11 3.6e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 35260 # 36687 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_63 - 476 DNA_methylase PF00145.12 335 1e-10 34.9 0.0 2 2 0.0031 0.53 2.9 0.0 290 330 407 448 341 452 0.73 # 35260 # 36687 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_28 - 562 Trp_halogenase PF04820.9 454 0.0078 8.5 3.3 1 1 8.1e-05 0.014 7.6 3.3 1 47 100 143 100 151 0.76 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_5 - 492 KAP_NTPase PF07693.9 325 0.00036 13.2 1.8 1 2 0.00056 0.097 5.3 0.0 23 47 33 57 26 143 0.77 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 KAP_NTPase PF07693.9 325 0.00036 13.2 1.8 2 2 0.00018 0.031 6.9 0.0 23 42 325 344 319 398 0.87 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_15 PF13175.1 415 6.4e-10 32.2 1.2 1 3 6e-05 0.011 8.5 0.0 26 54 34 58 5 119 0.80 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_15 PF13175.1 415 6.4e-10 32.2 1.2 2 3 6.4e-06 0.0011 11.7 0.0 26 90 326 383 300 417 0.60 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_15 PF13175.1 415 6.4e-10 32.2 1.2 3 3 3.8e-05 0.0067 9.1 0.1 352 414 415 467 393 476 0.75 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_28 - 562 NAD_binding_7 PF13241.1 103 6.7e-06 20.0 1.2 1 2 1.9e-05 0.0032 11.4 0.2 9 38 100 129 96 164 0.90 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 NAD_binding_7 PF13241.1 103 6.7e-06 20.0 1.2 2 2 0.00049 0.085 6.9 0.1 8 45 271 314 264 382 0.66 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_49 - 415 N6_N4_Mtase PF01555.13 231 9.1e-25 81.1 0.0 1 1 9.2e-27 1.6e-24 80.3 0.0 1 228 129 389 129 392 0.81 # 26916 # 28160 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.533 4_5 - 492 AAA_17 PF13207.1 121 1.6e-06 22.7 3.7 1 2 0.0046 0.4 5.2 0.4 1 20 32 51 32 195 0.85 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_17 PF13207.1 121 1.6e-06 22.7 3.7 2 2 6e-07 5.2e-05 17.8 0.1 1 52 324 379 324 486 0.80 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_35 - 488 AAA_17 PF13207.1 121 0.00022 15.8 0.0 1 1 1.3e-05 0.0011 13.5 0.0 2 63 245 299 245 388 0.63 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 4_5 - 492 AAA_21 PF13304.1 303 3.3e-18 60.3 5.1 1 4 3.9e-07 6.8e-05 16.6 0.6 3 21 34 52 33 85 0.87 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_21 PF13304.1 303 3.3e-18 60.3 5.1 2 4 0.00027 0.048 7.2 0.0 237 303 100 160 91 160 0.84 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_21 PF13304.1 303 3.3e-18 60.3 5.1 3 4 4.9e-07 8.6e-05 16.2 0.0 3 43 326 361 325 384 0.76 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_21 PF13304.1 303 3.3e-18 60.3 5.1 4 4 6.8e-08 1.2e-05 19.1 0.0 233 301 405 467 386 469 0.89 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 Miro PF08477.8 119 6.5e-09 30.0 1.0 1 2 5.7e-06 0.00098 13.3 0.0 1 21 32 52 32 82 0.89 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 Miro PF08477.8 119 6.5e-09 30.0 1.0 2 2 3.4e-06 0.00059 14.0 0.0 1 25 324 348 324 392 0.72 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 MobB PF03205.9 140 8.6e-05 16.0 0.4 1 2 0.0015 0.27 4.7 0.0 2 20 32 50 31 61 0.86 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 MobB PF03205.9 140 8.6e-05 16.0 0.4 2 2 7.6e-05 0.013 8.9 0.1 3 23 325 345 323 353 0.87 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_52 - 262 ArsA_ATPase PF02374.10 305 9.5e-06 18.5 0.0 1 2 3e-07 5.3e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 29090 # 29875 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_52 - 262 ArsA_ATPase PF02374.10 305 9.5e-06 18.5 0.0 2 2 0.029 5 -0.3 0.0 124 136 124 136 106 143 0.79 # 29090 # 29875 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_14 - 504 PhoH PF02562.11 205 4.5e-06 19.7 0.2 1 2 0.0013 0.23 4.3 0.0 22 45 22 45 4 61 0.78 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 3_14 - 504 PhoH PF02562.11 205 4.5e-06 19.7 0.2 2 2 7.5e-06 0.0013 11.7 0.0 122 168 196 240 193 255 0.83 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 4_5 - 492 Zeta_toxin PF06414.7 201 8.9e-05 15.3 1.5 1 2 0.00049 0.042 6.6 0.0 21 40 35 54 30 63 0.87 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 Zeta_toxin PF06414.7 201 8.9e-05 15.3 1.5 2 2 0.00035 0.03 7.0 0.0 20 40 326 346 309 353 0.83 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_35 - 488 Zeta_toxin PF06414.7 201 0.00029 13.6 0.0 1 1 6.3e-06 0.00055 12.7 0.0 18 52 244 277 239 314 0.90 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_28 - 562 NAD_binding_8 PF13450.1 68 0.00012 15.8 1.2 1 1 6.9e-07 0.00012 15.8 1.2 1 35 103 136 103 155 0.91 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_5 - 492 SMC_N PF02463.14 220 3.8e-10 33.0 6.8 1 4 0.00018 0.032 7.1 0.0 29 43 35 49 25 65 0.86 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 SMC_N PF02463.14 220 3.8e-10 33.0 6.8 2 4 0.00018 0.031 7.2 0.0 116 203 79 160 70 173 0.81 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 SMC_N PF02463.14 220 3.8e-10 33.0 6.8 3 4 0.00011 0.019 7.8 0.1 27 44 325 342 311 344 0.80 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 SMC_N PF02463.14 220 3.8e-10 33.0 6.8 4 4 7.9e-06 0.0014 11.6 0.2 117 211 382 478 359 485 0.81 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_4 - 372 TIGR02432 TIGR02432 189 7.3e-05 16.1 0.1 1 2 1.1e-05 0.002 11.5 0.0 1 58 52 109 52 118 0.85 # 2580 # 3695 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_4 - 372 TIGR02432 TIGR02432 189 7.3e-05 16.1 0.1 2 2 0.0084 1.5 2.1 0.0 140 165 235 260 207 262 0.76 # 2580 # 3695 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 4_5 - 492 Arch_ATPase PF01637.13 234 0.00018 14.9 3.0 1 3 0.02 3.4 0.9 0.0 25 40 35 50 24 85 0.87 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 Arch_ATPase PF01637.13 234 0.00018 14.9 3.0 2 3 0.0083 1.4 2.1 0.7 53 104 181 237 166 267 0.65 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 Arch_ATPase PF01637.13 234 0.00018 14.9 3.0 3 3 3.2e-05 0.0056 10.0 0.0 24 68 326 374 323 473 0.69 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_16 PF13191.1 185 1.7e-05 18.6 0.1 1 2 0.00039 0.068 6.8 0.0 29 44 35 50 22 151 0.89 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_16 PF13191.1 185 1.7e-05 18.6 0.1 2 2 7.1e-05 0.012 9.2 0.0 27 49 325 347 320 410 0.84 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_23 PF13476.1 202 8.6e-08 26.4 8.6 1 3 3.8e-05 0.0066 10.4 0.0 24 38 35 49 25 57 0.91 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_23 PF13476.1 202 8.6e-08 26.4 8.6 2 3 0.0033 0.57 4.1 1.4 141 177 187 244 105 280 0.58 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_23 PF13476.1 202 8.6e-08 26.4 8.6 3 3 1.9e-06 0.00033 14.7 0.4 22 39 325 342 288 343 0.76 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_18 PF13238.1 129 0.0017 12.4 8.3 1 2 0.0015 0.27 5.3 0.0 1 21 33 53 33 89 0.81 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_18 PF13238.1 129 0.0017 12.4 8.3 2 2 3.5e-05 0.006 10.6 0.6 1 23 325 354 325 475 0.80 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 3_16 - 347 AAA_13 PF13166.1 712 0.012 7.7 36.6 1 2 0.0019 0.33 2.9 28.3 283 457 85 259 71 272 0.58 # 14186 # 15226 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_16 - 347 AAA_13 PF13166.1 712 0.012 7.7 36.6 2 2 2.3e-05 0.0041 9.2 23.2 287 474 160 339 154 345 0.78 # 14186 # 15226 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 1_52 - 262 CbiA PF01656.18 195 2e-30 99.3 0.0 1 1 2.9e-32 2.5e-30 99.0 0.0 1 170 5 205 5 229 0.77 # 29090 # 29875 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_14 - 402 CbiA PF01656.18 195 2.6e-18 59.8 0.0 1 1 5.6e-20 4.9e-18 58.9 0.0 1 142 111 292 111 327 0.76 # 9154 # 10359 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 3_14 - 504 AAA_14 PF13173.1 128 2.8e-05 17.7 1.3 1 2 2.5e-05 0.0044 10.6 0.1 11 46 28 62 18 156 0.76 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 3_14 - 504 AAA_14 PF13173.1 128 2.8e-05 17.7 1.3 2 2 0.0011 0.2 5.3 0.0 51 99 176 227 127 241 0.73 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 2_28 - 562 HI0933_like PF03486.9 409 7.5e-09 28.1 5.0 1 2 4.3e-07 7.4e-05 15.0 2.8 2 33 100 131 99 139 0.91 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 HI0933_like PF03486.9 409 7.5e-09 28.1 5.0 2 2 1.7e-06 0.0003 13.0 0.0 83 163 286 362 281 379 0.85 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_5 - 492 AAA_29 PF13555.1 62 7.6e-08 25.5 0.5 1 2 9.5e-06 0.0017 11.6 0.0 25 40 32 47 20 52 0.78 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_29 PF13555.1 62 7.6e-08 25.5 0.5 2 2 1.1e-05 0.0019 11.4 0.1 14 40 314 339 310 343 0.77 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_28 - 562 FAD_binding_2 PF00890.19 417 1.7e-06 20.8 5.3 1 3 9.5e-09 1.7e-06 20.8 5.3 2 32 101 131 100 138 0.91 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 FAD_binding_2 PF00890.19 417 1.7e-06 20.8 5.3 2 3 0.034 5.9 -0.8 0.2 142 204 311 366 286 382 0.67 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 FAD_binding_2 PF00890.19 417 1.7e-06 20.8 5.3 3 3 0.0019 0.32 3.4 0.1 373 402 374 405 368 419 0.86 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_35 - 488 AAA PF00004.24 132 3.7e-29 95.3 0.0 1 1 1.8e-30 1.6e-28 93.3 0.0 1 131 245 371 245 372 0.97 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 4_5 - 492 AAA PF00004.24 132 7.1e-05 16.7 0.1 1 2 0.011 0.99 3.3 0.0 3 22 35 54 33 124 0.77 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA PF00004.24 132 7.1e-05 16.7 0.1 2 2 6.4e-05 0.0056 10.6 0.0 3 23 327 347 325 437 0.75 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 3_14 - 504 UvrD_C PF13361.1 351 1.6e-10 34.6 0.0 1 1 1.7e-12 3e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 2_28 - 562 Thi4 PF01946.12 230 0.00047 13.0 0.4 1 1 6.3e-06 0.0011 11.7 0.4 19 70 100 150 95 158 0.88 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_4 - 372 PAPS_reduct PF01507.14 174 6.2e-12 39.4 0.4 1 2 0.014 2.4 1.6 0.0 2 17 53 68 52 91 0.76 # 2580 # 3695 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_4 - 372 PAPS_reduct PF01507.14 174 6.2e-12 39.4 0.4 2 2 4.4e-13 7.7e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 2580 # 3695 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 2_28 - 562 Pyr_redox_3 PF13738.1 203 2.5e-18 60.5 0.1 1 3 1.5e-06 0.00026 14.8 0.0 164 199 95 130 48 134 0.85 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 Pyr_redox_3 PF13738.1 203 2.5e-18 60.5 0.1 2 3 5.8e-09 1e-06 22.6 0.0 115 201 219 304 174 306 0.81 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 Pyr_redox_3 PF13738.1 203 2.5e-18 60.5 0.1 3 3 5.6e-08 9.8e-06 19.4 0.0 89 147 317 372 309 431 0.82 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_5 - 492 MMR_HSR1 PF01926.18 116 3.2e-06 20.8 4.1 1 2 2.2e-05 0.0038 10.9 0.1 1 27 32 92 32 178 0.52 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 MMR_HSR1 PF01926.18 116 3.2e-06 20.8 4.1 2 2 4.9e-05 0.0085 9.8 0.7 1 99 324 473 324 488 0.56 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_55 - 212 N6_Mtase PF02384.11 311 6.4e-07 22.3 0.0 1 1 5.9e-09 1e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 31434 # 32069 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 4_5 - 492 DUF258 PF03193.11 161 1.4e-08 27.8 0.1 1 2 2e-07 3.5e-05 16.7 0.0 39 95 34 126 15 136 0.87 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 DUF258 PF03193.11 161 1.4e-08 27.8 0.1 2 2 6.4e-05 0.011 8.6 0.0 38 67 325 352 302 391 0.77 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_52 - 262 AAA_31 PF13614.1 157 2.3e-10 34.3 0.0 1 1 5.3e-12 4.6e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 29090 # 29875 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_14 - 402 AAA_31 PF13614.1 157 0.00016 15.3 0.0 1 1 1.1e-05 0.00095 12.8 0.0 108 147 235 273 230 279 0.86 # 9154 # 10359 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 4_5 - 492 NTPase_1 PF03266.10 168 0.00014 15.2 2.1 1 2 0.044 7.6 -0.1 0.0 1 19 32 50 32 62 0.83 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 NTPase_1 PF03266.10 168 0.00014 15.2 2.1 2 2 1.7e-05 0.003 11.0 1.0 1 26 324 349 324 490 0.62 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_35 - 488 AAA_33 PF13671.1 143 0.00048 13.7 0.0 1 1 1.6e-05 0.0014 12.2 0.0 2 33 245 297 245 399 0.73 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 4_5 - 492 AAA_33 PF13671.1 143 0.0011 12.5 0.1 1 2 0.017 1.5 2.4 0.0 4 19 35 50 33 121 0.83 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_33 PF13671.1 143 0.0011 12.5 0.1 2 2 0.00051 0.044 7.3 0.0 3 33 326 356 325 398 0.77 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_49 - 415 Methyltransf_26 PF13659.1 117 0.0001 16.1 0.0 1 2 5.9e-06 0.001 12.8 0.0 68 116 126 180 46 181 0.82 # 26916 # 28160 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_49 - 415 Methyltransf_26 PF13659.1 117 0.0001 16.1 0.0 2 2 0.038 6.7 0.5 0.0 1 31 352 381 352 397 0.71 # 26916 # 28160 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.533 4_8 - 258 FmrO PF07091.6 251 7.1e-85 277.6 0.0 1 1 4.7e-87 8.1e-85 277.4 0.0 1 251 12 251 12 251 0.99 # 7012 # 7785 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.302 2_28 - 562 XdhC_C PF13478.1 136 0.0014 12.6 1.0 1 2 0.08 14 -0.3 0.1 1 29 101 129 101 163 0.86 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 XdhC_C PF13478.1 136 0.0014 12.6 1.0 2 2 6.9e-05 0.012 9.6 0.1 1 66 273 351 273 371 0.64 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_14 - 504 AAA_30 PF13604.1 196 8.5e-08 25.7 0.1 1 2 1.8e-06 0.00016 15.0 0.0 19 80 20 81 11 109 0.77 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 3_14 - 504 AAA_30 PF13604.1 196 8.5e-08 25.7 0.1 2 2 0.00035 0.03 7.5 0.0 115 133 211 229 174 278 0.75 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 4_5 - 492 AAA_30 PF13604.1 196 5.5e-05 16.5 1.7 1 2 0.0044 0.38 4.0 0.0 18 39 31 51 25 61 0.81 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_30 PF13604.1 196 5.5e-05 16.5 1.7 2 2 4.7e-05 0.0041 10.4 0.0 21 133 325 467 321 469 0.59 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_8 - 258 TehB PF03848.9 192 0.0014 11.5 2.3 1 1 3.7e-06 0.00064 12.6 0.2 32 112 108 190 66 207 0.86 # 7012 # 7785 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.302 4_8 - 258 MTS PF05175.9 170 6.7e-06 19.3 0.0 1 1 7.2e-08 1.3e-05 18.4 0.0 33 103 108 177 99 195 0.88 # 7012 # 7785 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.302 2_2 - 296 Lon_C PF05362.8 205 2.4e-17 56.6 0.0 1 1 2e-19 3.4e-17 56.1 0.0 44 200 133 290 97 294 0.87 # 696 # 1583 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.462 4_5 - 492 Dynamin_N PF00350.18 168 0.018 8.5 17.3 1 2 0.0077 1.3 2.4 11.6 1 86 33 234 33 305 0.68 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 Dynamin_N PF00350.18 168 0.018 8.5 17.3 2 2 0.00049 0.085 6.3 0.3 1 111 325 437 325 487 0.51 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 ABC_tran PF00005.22 137 5.8e-31 101.3 8.0 1 4 5.6e-10 9.8e-08 26.1 0.1 5 37 24 56 20 66 0.85 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 ABC_tran PF00005.22 137 5.8e-31 101.3 8.0 2 4 1e-07 1.8e-05 18.7 0.0 101 137 94 128 73 128 0.79 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 ABC_tran PF00005.22 137 5.8e-31 101.3 8.0 3 4 0.041 7.1 0.6 0.5 51 102 203 255 163 276 0.46 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 ABC_tran PF00005.22 137 5.8e-31 101.3 8.0 4 4 3.2e-19 5.5e-17 56.0 0.1 2 136 313 436 312 437 0.81 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_28 - 562 K_oxygenase PF13434.1 341 5.8e-06 19.0 0.2 1 3 0.0041 0.71 2.3 0.2 187 223 95 129 86 132 0.74 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 K_oxygenase PF13434.1 341 5.8e-06 19.0 0.2 2 3 2.9e-06 0.0005 12.7 0.0 130 231 217 309 200 339 0.79 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 K_oxygenase PF13434.1 341 5.8e-06 19.0 0.2 3 3 0.022 3.7 -0.0 0.0 139 160 345 366 314 376 0.63 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_5 - 492 ATP-synt_ab PF00006.20 215 3.6e-05 17.0 0.1 1 2 0.044 7.7 -0.4 0.0 17 34 32 49 28 55 0.88 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 ATP-synt_ab PF00006.20 215 3.6e-05 17.0 0.1 2 2 1.5e-06 0.00026 14.2 0.1 7 66 314 380 307 402 0.80 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 3_14 - 504 AAA_19 PF13245.1 76 2.7e-09 30.4 0.0 1 1 8.4e-11 7.3e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 4_5 - 492 AAA_19 PF13245.1 76 0.00029 14.3 0.1 1 1 1.5e-05 0.0013 12.2 0.0 10 48 323 360 317 370 0.75 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_10 PF12846.2 304 7.6e-05 15.9 4.7 1 2 0.00068 0.12 5.4 0.0 6 22 35 51 33 67 0.80 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_10 PF12846.2 304 7.6e-05 15.9 4.7 2 2 1.7e-05 0.0029 10.7 0.5 4 118 325 478 322 489 0.76 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_28 - 562 FAD_oxidored PF12831.2 428 1e-06 21.7 3.8 1 2 5.9e-09 1e-06 21.7 3.8 1 41 100 139 100 159 0.83 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 FAD_oxidored PF12831.2 428 1e-06 21.7 3.8 2 2 0.01 1.7 1.2 0.0 84 120 305 341 261 364 0.71 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 DAO PF01266.19 358 1.2e-11 37.8 7.5 1 2 1.9e-08 3.3e-06 19.9 1.5 2 35 101 134 100 161 0.85 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 DAO PF01266.19 358 1.2e-11 37.8 7.5 2 2 7.7e-09 1.3e-06 21.1 0.5 151 239 314 400 274 529 0.80 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_14 - 504 ResIII PF04851.10 184 1.8e-06 21.5 0.0 1 1 2.8e-08 4.8e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 4_8 - 258 Methyltransf_31 PF13847.1 152 0.00055 13.2 0.2 1 2 0.093 16 -1.3 0.0 95 98 39 42 7 89 0.58 # 7012 # 7785 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.302 4_8 - 258 Methyltransf_31 PF13847.1 152 0.00055 13.2 0.2 2 2 8.4e-06 0.0015 11.9 0.0 5 83 108 182 104 231 0.78 # 7012 # 7785 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.302 4_5 - 492 DUF3584 PF12128.3 1201 0.012 6.5 13.2 1 3 0.0039 0.34 1.7 0.0 13 36 26 49 22 50 0.84 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 DUF3584 PF12128.3 1201 0.012 6.5 13.2 2 3 0.0094 0.82 0.5 7.1 629 703 191 268 173 301 0.38 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 DUF3584 PF12128.3 1201 0.012 6.5 13.2 3 3 0.00017 0.015 6.2 0.3 19 37 324 342 318 343 0.88 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 3_16 - 347 DUF3584 PF12128.3 1201 0.029 5.3 51.1 1 2 0.01 0.89 0.4 32.3 377 534 86 242 42 246 0.65 # 14186 # 15226 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_16 - 347 DUF3584 PF12128.3 1201 0.029 5.3 51.1 2 2 4e-05 0.0035 8.3 20.6 613 709 225 327 220 345 0.80 # 14186 # 15226 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_14 - 504 Viral_helicase1 PF01443.13 234 1.6e-10 34.6 0.0 1 3 1.4e-05 0.0025 11.0 0.0 2 49 23 73 22 87 0.67 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 3_14 - 504 Viral_helicase1 PF01443.13 234 1.6e-10 34.6 0.0 2 3 1.8e-05 0.0032 10.7 0.0 56 105 188 234 146 256 0.78 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 3_14 - 504 Viral_helicase1 PF01443.13 234 1.6e-10 34.6 0.0 3 3 5.2e-05 0.009 9.2 0.0 176 227 404 462 344 467 0.75 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 4_5 - 492 PduV-EutP PF10662.4 143 4.4e-06 19.9 1.2 1 3 8e-05 0.014 8.6 0.0 3 31 32 60 30 100 0.90 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 PduV-EutP PF10662.4 143 4.4e-06 19.9 1.2 2 3 0.00051 0.088 6.0 0.1 3 23 324 344 322 352 0.89 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 PduV-EutP PF10662.4 143 4.4e-06 19.9 1.2 3 3 0.0082 1.4 2.1 0.0 40 72 431 463 420 484 0.69 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_35 - 488 DUF815 PF05673.8 250 2.7e-06 20.1 0.0 1 1 1e-07 8.7e-06 18.5 0.0 19 154 208 353 194 365 0.75 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 4_5 - 492 DUF815 PF05673.8 250 4.4e-05 16.2 0.2 1 2 0.00025 0.022 7.3 0.0 58 77 35 54 27 63 0.85 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 DUF815 PF05673.8 250 4.4e-05 16.2 0.2 2 2 0.00062 0.054 6.0 0.0 55 76 324 345 315 351 0.85 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_28 - 562 Pyr_redox PF00070.22 80 1.7e-19 63.8 5.4 1 2 1.2e-06 0.00022 15.4 1.5 2 31 101 130 100 132 0.95 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 Pyr_redox PF00070.22 80 1.7e-19 63.8 5.4 2 2 3.2e-17 5.5e-15 49.3 0.1 1 72 272 342 272 351 0.91 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_14 - 504 AAA_11 PF13086.1 236 5e-07 23.2 0.1 1 1 1.9e-08 3.3e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 4_8 - 258 Methyltransf_23 PF13489.1 161 1.4e-05 18.5 0.0 1 1 1.2e-07 2e-05 18.0 0.0 9 93 93 187 85 237 0.73 # 7012 # 7785 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.302 1_4 - 372 tRNA_Me_trans PF03054.11 356 9.2e-05 14.8 0.0 1 2 1.6e-06 0.00029 13.1 0.0 2 67 52 118 51 142 0.74 # 2580 # 3695 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_4 - 372 tRNA_Me_trans PF03054.11 356 9.2e-05 14.8 0.0 2 2 0.042 7.2 -1.4 0.0 193 224 274 305 236 311 0.83 # 2580 # 3695 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 4_5 - 492 RNA_helicase PF00910.17 107 0.0012 12.8 0.2 1 2 0.0033 0.57 4.1 0.0 3 22 35 54 33 65 0.83 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 RNA_helicase PF00910.17 107 0.0012 12.8 0.2 2 2 0.00092 0.16 5.9 0.0 2 22 326 346 325 380 0.79 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 UPF0079 PF02367.12 123 0.00071 12.9 0.1 1 2 0.0017 0.3 4.4 0.0 18 36 33 51 26 60 0.85 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 UPF0079 PF02367.12 123 0.00071 12.9 0.1 2 2 0.00063 0.11 5.8 0.0 14 39 321 346 312 357 0.83 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_28 - 562 AlaDh_PNT_C PF01262.16 168 1.5e-06 21.6 2.3 1 2 3.9e-06 0.00068 12.9 0.3 16 50 94 128 80 131 0.87 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_28 - 562 AlaDh_PNT_C PF01262.16 168 1.5e-06 21.6 2.3 2 2 0.00012 0.02 8.1 0.1 19 60 269 310 260 341 0.84 # 19851 # 21536 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_5 - 492 AAA_24 PF13479.1 213 6.5e-05 16.2 3.2 1 2 0.00068 0.12 5.6 0.0 8 38 35 64 30 111 0.76 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_24 PF13479.1 213 6.5e-05 16.2 3.2 2 2 2.2e-05 0.0038 10.5 0.1 4 23 323 342 321 356 0.86 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 3_14 - 504 UvrD-helicase PF00580.16 315 9.5e-17 54.9 3.9 1 2 5.8e-06 0.0005 13.1 0.1 2 38 8 44 7 64 0.81 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 3_14 - 504 UvrD-helicase PF00580.16 315 9.5e-17 54.9 3.9 2 2 6.8e-15 5.9e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 12388 # 13899 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511 4_3 - 181 UvrD-helicase PF00580.16 315 0.00025 14.1 3.8 1 1 3.3e-06 0.00029 13.9 3.8 127 229 52 155 10 161 0.72 # 1397 # 1939 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 4_5 - 492 NACHT PF05729.7 166 2.5e-06 20.9 0.1 1 2 0.00046 0.081 6.3 0.0 3 20 33 50 31 63 0.86 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 NACHT PF05729.7 166 2.5e-06 20.9 0.1 2 2 7.1e-06 0.0012 12.2 0.0 3 24 325 346 323 394 0.84 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_25 PF13481.1 194 3.5e-05 17.0 0.0 1 2 0.022 1.3 2.1 0.0 37 54 34 51 30 72 0.81 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_25 PF13481.1 194 3.5e-05 17.0 0.0 2 2 4.2e-05 0.0025 10.9 0.0 29 54 318 343 294 423 0.76 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_35 - 488 AAA_25 PF13481.1 194 0.00011 15.3 3.6 1 3 0.037 2.1 1.3 1.4 36 55 245 264 224 275 0.81 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_35 - 488 AAA_25 PF13481.1 194 0.00011 15.3 3.6 2 3 0.00011 0.0061 9.6 0.0 127 176 287 336 270 348 0.69 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_35 - 488 AAA_25 PF13481.1 194 0.00011 15.3 3.6 3 3 0.013 0.73 2.9 0.0 69 172 337 440 325 448 0.66 # 19340 # 20803 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_52 - 262 AAA_25 PF13481.1 194 0.00067 12.8 0.0 1 1 1.8e-05 0.0011 12.1 0.0 42 91 12 51 11 134 0.78 # 29090 # 29875 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_5 - 492 ABC_tran_2 PF12848.2 85 1.1e-13 44.6 16.1 1 1 2e-14 3.4e-12 39.8 16.1 1 85 167 283 167 283 0.93 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_28 PF13521.1 163 6.8e-05 16.6 4.3 1 2 0.023 4 1.0 0.0 2 20 33 51 32 66 0.84 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_5 - 492 AAA_28 PF13521.1 163 6.8e-05 16.6 4.3 2 2 5.6e-07 9.8e-05 16.0 0.1 1 34 324 359 324 391 0.79 # 3238 # 4713 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/62420ed4-a549-437f-b4e9-6c3337c4bcae # Target file: checkm_output/bins/pm948/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm948/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/62420ed4-a549-437f-b4e9-6c3337c4bcae checkm_output/bins/pm948/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:11:28 2020 # [ok]