# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 443 AAA_21 PF13304.1 303 6.1e-39 123.5 12.1 1 1 2.2e-39 1.3e-38 122.4 12.1 2 302 58 373 57 374 0.79 # 465 # 1793 # -1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 1_2 - 443 SMC_N PF02463.14 220 1.4e-05 13.3 1.7 1 1 5.8e-06 3.5e-05 12.0 1.7 27 83 58 117 41 380 0.82 # 465 # 1793 # -1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 1_2 - 443 AAA_23 PF13476.1 202 0.00031 10.0 5.0 1 1 0.00025 0.0015 7.8 5.0 23 53 59 92 56 438 0.69 # 465 # 1793 # -1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 1_2 - 443 AAA_29 PF13555.1 62 5e-05 11.8 0.4 1 1 2.5e-05 0.00015 10.3 0.1 24 42 56 74 44 78 0.80 # 465 # 1793 # -1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/444bff24-f3ee-4739-a272-462b67e446de # Target file: checkm_output/bins/pm942/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm942/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/444bff24-f3ee-4739-a272-462b67e446de checkm_output/bins/pm942/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:11:21 2020 # [ok]