# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_7 - 353 Methyltransf_32 PF13679.1 141 1.2e-05 14.2 0.0 1 1 2.9e-06 2.1e-05 13.4 0.0 33 77 12 56 10 117 0.79 # 4297 # 5355 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.407 1_7 - 353 YhjQ PF06564.7 244 4.7e-06 15.2 0.0 1 1 2.6e-06 1.8e-05 13.3 0.0 1 41 1 43 1 50 0.85 # 4297 # 5355 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.407 1_7 - 353 Fer4_NifH PF00142.13 273 1.7e-07 19.8 0.0 1 1 3.9e-08 2.7e-07 19.1 0.0 7 52 9 56 1 79 0.81 # 4297 # 5355 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.407 1_7 - 353 CbiA PF01656.18 195 1.8e-16 49.2 0.0 1 1 4e-17 2.8e-16 48.6 0.0 2 141 5 205 4 260 0.78 # 4297 # 5355 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.407 1_7 - 353 AAA_31 PF13614.1 157 1.4e-07 20.7 0.1 1 2 9.8e-08 6.9e-07 18.5 0.0 2 50 3 53 2 100 0.84 # 4297 # 5355 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.407 1_7 - 353 AAA_31 PF13614.1 157 1.4e-07 20.7 0.1 2 2 0.067 0.47 -0.5 0.0 109 156 146 196 143 197 0.72 # 4297 # 5355 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.407 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/aa5c7359-3719-476a-9917-95ef937b61f9 # Target file: checkm_output/bins/pm940/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm940/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/aa5c7359-3719-476a-9917-95ef937b61f9 checkm_output/bins/pm940/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:11:20 2020 # [ok]