# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_43 - 62 Mg_chelatase PF01078.16 207 0.00041 12.3 0.0 1 1 4.4e-06 0.00041 12.3 0.0 23 60 6 44 3 60 0.77 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_56 - 188 Methyltransf_12 PF08242.7 99 7.2e-05 16.1 0.0 1 1 1.2e-06 0.00011 15.5 0.0 1 99 55 144 55 144 0.84 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_65 - 228 UPF0020 PF01170.13 180 1.1e-05 17.9 0.0 1 2 0.00026 0.024 7.0 0.0 103 123 17 37 4 88 0.71 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_65 - 228 UPF0020 PF01170.13 180 1.1e-05 17.9 0.0 2 2 6.3e-05 0.0059 9.0 0.0 28 54 163 189 158 220 0.67 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_56 - 188 RrnaAD PF00398.15 262 3.9e-09 28.6 0.0 1 1 5.3e-11 5e-09 28.3 0.0 9 113 29 128 24 149 0.89 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_43 - 62 IstB_IS21 PF01695.12 178 0.00046 12.4 0.0 1 1 5.3e-06 0.0005 12.3 0.0 46 65 4 23 2 47 0.90 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_56 - 188 Methyltransf_18 PF12847.2 112 7.1e-10 32.3 0.0 1 1 1.5e-11 1.4e-09 31.3 0.0 4 109 53 146 50 148 0.89 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_27 - 1766 UvrD_C_2 PF13538.1 104 1e-08 28.1 0.1 1 1 4.6e-10 4.3e-08 26.1 0.1 2 103 1344 1450 1343 1451 0.76 # 19578 # 24875 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_40 - 864 DUF87 PF01935.12 229 5.9e-05 15.7 0.1 1 1 1.9e-06 0.00017 14.2 0.0 26 69 477 523 474 669 0.60 # 39306 # 41897 # -1 # ID=1_40;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.547 1_43 - 62 NB-ARC PF00931.17 287 0.00026 12.7 0.7 1 1 3.1e-06 0.00029 12.5 0.7 19 43 5 29 1 50 0.84 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_43 - 62 Septin PF00735.13 281 0.00015 13.6 0.1 1 1 1.6e-06 0.00015 13.6 0.1 4 38 5 43 2 60 0.61 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_43 - 62 AAA_22 PF13401.1 131 0.00029 13.8 0.1 1 1 4.1e-06 0.00038 13.4 0.1 3 33 4 34 1 60 0.77 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_65 - 228 Methyltransf_11 PF08241.7 95 0.00058 13.2 0.0 1 2 0.0024 0.23 4.9 0.0 78 93 53 68 48 70 0.84 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_65 - 228 Methyltransf_11 PF08241.7 95 0.00058 13.2 0.0 2 2 0.0014 0.13 5.7 0.0 5 54 172 220 168 226 0.82 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_65 - 228 N6_N4_Mtase PF01555.13 231 4.4e-37 120.5 0.0 1 2 8.3e-16 7.7e-14 44.5 0.0 1 114 21 124 21 139 0.88 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_65 - 228 N6_N4_Mtase PF01555.13 231 4.4e-37 120.5 0.0 2 2 5.3e-25 4.9e-23 74.6 0.0 169 228 141 200 126 203 0.90 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_28 - 744 AAA_17 PF13207.1 121 0.00048 13.8 0.1 1 1 3.3e-05 0.0031 11.2 0.0 5 62 191 242 189 267 0.61 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_43 - 62 MobB PF03205.9 140 2.2e-05 17.0 0.1 1 1 5.2e-07 2.4e-05 16.9 0.1 3 49 8 50 6 57 0.76 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_28 - 744 MobB PF03205.9 140 0.00026 13.5 0.1 1 1 1.3e-05 0.00061 12.3 0.1 7 33 192 218 188 223 0.87 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_43 - 62 PhoH PF02562.11 205 1.1e-05 17.5 0.0 1 1 1.2e-07 1.1e-05 17.5 0.0 18 64 4 51 1 61 0.78 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_43 - 62 T2SE PF00437.15 272 8.3e-06 17.6 0.0 1 1 8.9e-08 8.3e-06 17.6 0.0 127 150 4 27 1 42 0.79 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_43 - 62 AAA_26 PF13500.1 199 0.00029 13.3 0.0 1 1 3.1e-06 0.00029 13.3 0.0 3 49 8 56 6 61 0.69 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_43 - 62 SMC_N PF02463.14 220 0.00022 13.3 0.0 1 1 2.4e-06 0.00022 13.3 0.0 24 59 5 41 1 57 0.78 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_28 - 744 Arch_ATPase PF01637.13 234 0.00044 12.8 0.0 1 1 1e-05 0.00094 11.7 0.0 27 78 192 237 184 274 0.79 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_28 - 744 AAA_16 PF13191.1 185 0.00013 14.8 0.0 1 1 1e-05 0.00047 13.0 0.0 22 56 183 218 179 317 0.82 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_40 - 864 AAA_16 PF13191.1 185 0.00021 14.1 0.0 1 1 1.5e-05 0.00069 12.4 0.0 26 56 476 507 461 588 0.90 # 39306 # 41897 # -1 # ID=1_40;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.547 1_43 - 62 AAA_18 PF13238.1 129 0.00026 14.1 0.0 1 1 3.2e-06 0.0003 13.9 0.0 1 42 8 57 8 61 0.74 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_43 - 62 CbiA PF01656.18 195 0.00025 13.3 0.0 1 1 3.4e-06 0.00032 12.9 0.0 4 24 10 30 8 36 0.83 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_43 - 62 AAA_29 PF13555.1 62 0.00012 14.4 0.5 1 1 1.7e-06 0.00016 14.0 0.4 22 47 4 30 1 44 0.76 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_27 - 1766 AAA PF00004.24 132 0.0013 11.8 1.4 1 2 0.039 3.6 0.6 0.0 53 89 102 140 85 162 0.70 # 19578 # 24875 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_27 - 1766 AAA PF00004.24 132 0.0013 11.8 1.4 2 2 0.00034 0.032 7.3 0.0 3 74 992 1080 990 1091 0.56 # 19578 # 24875 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_43 - 62 Sigma54_activat PF00158.21 168 0.00021 13.6 0.0 1 1 2.2e-06 0.00021 13.6 0.0 20 44 3 27 1 45 0.81 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_56 - 188 N6_Mtase PF02384.11 311 0.00014 13.8 0.0 1 2 1.7e-05 0.0016 10.3 0.0 28 64 32 68 21 83 0.88 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_56 - 188 N6_Mtase PF02384.11 311 0.00014 13.8 0.0 2 2 0.018 1.7 0.4 0.0 127 137 114 124 103 134 0.82 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_28 - 744 TraG-D_C PF12696.2 128 3.3e-22 71.5 0.0 1 1 8.4e-24 7.8e-22 70.3 0.0 1 126 420 541 420 543 0.83 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_43 - 62 AAA_33 PF13671.1 143 0.00043 13.0 1.8 1 1 1.8e-05 0.0017 11.1 1.8 2 34 8 36 8 57 0.73 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_56 - 188 Methyltransf_26 PF13659.1 117 2.9e-13 42.7 0.0 1 1 1.2e-14 5.5e-13 41.8 0.0 2 114 52 147 51 150 0.91 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_65 - 228 Methyltransf_26 PF13659.1 117 6.4e-12 38.4 0.1 1 2 3e-07 1.4e-05 17.9 0.0 57 114 7 71 2 74 0.72 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_65 - 228 Methyltransf_26 PF13659.1 117 6.4e-12 38.4 0.1 2 2 2e-07 9.5e-06 18.5 0.0 4 44 167 206 164 222 0.82 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_27 - 1766 AAA_30 PF13604.1 196 1.8e-43 141.2 3.1 1 2 3.5e-05 0.0033 9.8 0.6 9 127 434 546 431 594 0.82 # 19578 # 24875 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_27 - 1766 AAA_30 PF13604.1 196 1.8e-43 141.2 3.1 2 2 1.9e-45 1.8e-43 141.2 3.1 2 187 971 1159 970 1166 0.91 # 19578 # 24875 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_43 - 62 FtsK_SpoIIIE PF01580.13 205 6.4e-05 15.3 0.9 1 1 8.5e-07 7.9e-05 15.0 0.6 39 54 6 21 1 36 0.82 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_56 - 188 MTS PF05175.9 170 2.2e-09 29.7 0.0 1 1 3.3e-11 3.1e-09 29.2 0.0 31 141 50 149 41 165 0.84 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_56 - 188 Methyltrans_SAM PF10672.4 286 0.00092 10.9 0.0 1 1 1.5e-05 0.0013 10.3 0.0 196 261 113 173 100 177 0.77 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_40 - 864 ABC_tran PF00005.22 137 0.00074 12.6 0.0 1 1 1.9e-05 0.0017 11.4 0.0 13 96 476 599 472 614 0.62 # 39306 # 41897 # -1 # ID=1_40;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.547 1_65 - 228 Cons_hypoth95 PF03602.10 183 1.1e-05 17.6 0.0 1 2 0.00039 0.036 6.2 0.0 112 146 18 54 9 81 0.65 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_65 - 228 Cons_hypoth95 PF03602.10 183 1.1e-05 17.6 0.0 2 2 3.9e-05 0.0036 9.5 0.0 41 62 162 183 145 219 0.78 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_27 - 1766 AAA_19 PF13245.1 76 6.5e-08 25.1 1.3 1 1 2e-08 9.2e-07 21.4 0.3 8 76 984 1049 977 1049 0.78 # 19578 # 24875 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_43 - 62 AAA_19 PF13245.1 76 0.00092 11.8 0.0 1 1 2.1e-05 0.00096 11.7 0.0 11 35 7 30 2 53 0.77 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_40 - 864 AAA_10 PF12846.2 304 8.4e-46 149.5 0.0 1 1 6.5e-47 2e-45 148.3 0.0 1 291 474 760 474 767 0.89 # 39306 # 41897 # -1 # ID=1_40;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.547 1_28 - 744 AAA_10 PF12846.2 304 2.2e-14 46.4 0.1 1 1 3.5e-14 1.1e-12 40.8 0.1 3 299 187 498 186 501 0.79 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_43 - 62 AAA_10 PF12846.2 304 0.00032 13.0 0.5 1 1 1.2e-05 0.00036 12.8 0.4 2 22 6 26 5 41 0.82 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_43 - 62 ResIII PF04851.10 184 1.6e-05 17.6 0.8 1 1 2.4e-07 2.3e-05 17.1 0.8 24 49 4 29 1 61 0.85 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_56 - 188 Methyltransf_31 PF13847.1 152 3.6e-06 19.5 0.0 1 1 4.8e-08 4.5e-06 19.1 0.0 5 119 52 162 48 183 0.83 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_43 - 62 DUF2075 PF09848.4 352 4.2e-05 15.4 0.0 1 1 4.5e-07 4.2e-05 15.4 0.0 2 26 6 33 5 60 0.76 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_43 - 62 DEAD PF00270.24 169 8.2e-05 14.9 0.6 1 1 1.1e-06 0.0001 14.6 0.6 14 32 5 23 1 60 0.80 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_28 - 744 TrwB_AAD_bind PF10412.4 386 3.3e-150 492.7 0.0 1 1 1.3e-151 4.1e-150 492.4 0.0 2 386 172 562 171 562 0.99 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_40 - 864 TrwB_AAD_bind PF10412.4 386 3.3e-05 15.4 0.0 1 1 2.1e-06 6.5e-05 14.4 0.0 16 71 475 536 470 546 0.79 # 39306 # 41897 # -1 # ID=1_40;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.547 1_43 - 62 TrwB_AAD_bind PF10412.4 386 0.00012 13.6 0.1 1 1 4.2e-06 0.00013 13.4 0.1 14 43 4 33 1 37 0.86 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_28 - 744 T4SS-DNA_transf PF02534.9 469 1.5e-12 39.6 0.0 1 1 3.7e-13 3.5e-11 35.1 0.0 142 395 273 510 249 556 0.73 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_56 - 188 TIGR00755 TIGR00755 256 1.1e-08 27.1 0.0 1 1 1.6e-10 1.5e-08 26.7 0.0 8 105 29 123 25 134 0.90 # 51747 # 52310 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_65 - 228 MethyltransfD12 PF02086.10 260 0.0004 12.7 0.0 1 2 0.015 1.4 1.0 0.0 175 188 18 31 8 92 0.82 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_65 - 228 MethyltransfD12 PF02086.10 260 0.0004 12.7 0.0 2 2 4e-05 0.0037 9.5 0.0 20 46 163 189 148 197 0.78 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_43 - 62 Pox_A32 PF04665.7 241 0.00017 13.8 0.1 1 1 2.1e-06 0.0002 13.5 0.1 10 38 2 30 1 35 0.86 # 42961 # 43146 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 1_72 - 309 Methyltransf_23 PF13489.1 161 0.0008 12.0 0.0 1 1 2e-05 0.0019 10.7 0.0 59 117 91 172 57 191 0.76 # 64557 # 65483 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 1_28 - 744 GTP_EFTU PF00009.22 188 4e-05 15.9 0.0 1 2 4.1e-05 0.0038 9.5 0.0 2 28 184 210 183 232 0.90 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_28 - 744 GTP_EFTU PF00009.22 188 4e-05 15.9 0.0 2 2 0.002 0.19 3.9 0.0 51 85 335 367 316 375 0.89 # 24875 # 27106 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_65 - 228 Methyltransf_15 PF09445.5 164 0.00072 11.9 0.0 1 2 0.042 3.9 -0.2 0.0 53 79 4 29 2 33 0.90 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 1_65 - 228 Methyltransf_15 PF09445.5 164 0.00072 11.9 0.0 2 2 4.3e-05 0.004 9.5 0.0 3 31 166 194 164 208 0.86 # 57982 # 58665 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.554 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/c775d825-1e34-43c5-baac-3720d488a549 # Target file: checkm_output/bins/pm937/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm937/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c775d825-1e34-43c5-baac-3720d488a549 checkm_output/bins/pm937/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:11:22 2020 # [ok]