# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_50 - 262 Mg_chelatase PF01078.16 207 0.00063 12.1 0.0 1 1 1.1e-05 0.0013 11.1 0.0 23 43 100 120 96 153 0.86 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_3 - 231 OB_NTP_bind PF07717.11 114 0.00077 12.5 0.0 1 1 9.9e-06 0.0012 11.9 0.0 24 83 28 97 16 127 0.77 # 1778 # 2470 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_79 - 228 UPF0020 PF01170.13 180 1.6e-05 17.8 0.0 1 2 0.00028 0.034 6.9 0.0 103 121 17 35 4 89 0.71 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_79 - 228 UPF0020 PF01170.13 180 1.6e-05 17.8 0.0 2 2 6.3e-05 0.0079 9.0 0.0 28 54 163 189 158 220 0.67 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_50 - 262 IstB_IS21 PF01695.12 178 3.9e-69 224.8 0.1 1 1 4.1e-71 5.1e-69 224.4 0.1 2 177 55 230 54 231 0.98 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_70 - 215 MipZ PF09140.6 261 3e-08 26.2 2.3 1 2 0.0008 0.1 4.8 0.5 7 25 8 26 2 38 0.71 # 63961 # 64605 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_70 - 215 MipZ PF09140.6 261 3e-08 26.2 2.3 2 2 9e-09 1.1e-06 21.1 0.1 70 133 45 108 25 125 0.84 # 63961 # 64605 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_43 - 565 3HCDH_N PF02737.13 180 0.004 10.0 6.4 1 2 0.0047 0.59 2.9 2.4 1 30 99 128 99 134 0.93 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 3HCDH_N PF02737.13 180 0.004 10.0 6.4 2 2 9e-05 0.011 8.6 0.1 2 39 272 309 271 348 0.73 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 GIDA PF01134.17 392 3.2e-08 26.0 6.6 1 3 3.5e-10 4.3e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 GIDA PF01134.17 392 3.2e-08 26.0 6.6 2 3 0.038 4.7 -0.9 0.0 3 31 273 301 271 315 0.84 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 GIDA PF01134.17 392 3.2e-08 26.0 6.6 3 3 0.018 2.3 0.1 0.1 349 385 393 429 387 433 0.77 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_86 - 176 SSB PF00436.20 104 7.6e-41 131.5 0.3 1 1 7.9e-43 9.9e-41 131.1 0.3 1 101 6 109 6 112 0.96 # 76233 # 76760 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.598 1_43 - 565 Pyr_redox_2 PF07992.9 201 9.9e-44 142.8 0.0 1 1 3.2e-45 4.1e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_8 - 383 DUF87 PF01935.12 229 0.00077 12.5 0.0 1 1 1.1e-05 0.0014 11.7 0.0 28 56 162 191 161 192 0.88 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_48 - 287 AAA_22 PF13401.1 131 4.7e-17 55.6 0.0 1 1 2.7e-18 8.4e-17 54.8 0.0 7 126 64 190 59 194 0.94 # 45917 # 46777 # 1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 1_50 - 262 AAA_22 PF13401.1 131 3.4e-06 20.5 0.1 1 2 1.1e-05 0.00035 14.0 0.2 2 28 97 123 96 159 0.74 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 AAA_22 PF13401.1 131 3.4e-06 20.5 0.1 2 2 0.0083 0.26 4.7 0.0 87 117 151 196 132 204 0.62 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_8 - 383 AAA_22 PF13401.1 131 1.2e-05 18.6 0.0 1 1 9.8e-07 3.1e-05 17.4 0.0 4 46 157 196 152 233 0.76 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_20 - 518 AAA_22 PF13401.1 131 0.00036 13.9 0.0 1 1 2.6e-05 0.00081 12.8 0.0 6 28 227 249 222 330 0.78 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_8 - 383 ATP_bind_1 PF03029.12 238 5.8e-05 15.9 0.0 1 1 7.2e-07 9e-05 15.3 0.0 1 23 162 184 162 197 0.86 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_43 - 565 DFP PF04127.10 185 0.00097 12.0 2.4 1 2 0.00039 0.049 6.4 0.4 28 51 105 128 99 156 0.83 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 DFP PF04127.10 185 0.00097 12.0 2.4 2 2 0.0014 0.17 4.7 0.1 32 53 281 302 276 336 0.77 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_50 - 262 AAA_3 PF07726.6 131 0.00064 12.6 0.0 1 1 1.2e-05 0.0015 11.4 0.0 2 72 102 171 101 201 0.70 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_43 - 565 NAD_binding_7 PF13241.1 103 4.2e-07 23.4 1.2 1 2 5.4e-05 0.0068 9.9 0.2 9 38 99 128 96 184 0.89 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 NAD_binding_7 PF13241.1 103 4.2e-07 23.4 1.2 2 2 1.4e-05 0.0018 11.8 0.1 8 41 270 306 264 380 0.74 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_79 - 228 N6_N4_Mtase PF01555.13 231 5.1e-36 117.5 0.0 1 2 7.6e-15 9.5e-13 41.3 0.0 1 114 21 124 21 137 0.89 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_79 - 228 N6_N4_Mtase PF01555.13 231 5.1e-36 117.5 0.0 2 2 5.4e-25 6.7e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_8 - 383 AAA_17 PF13207.1 121 2.3e-05 18.4 0.1 1 1 7.1e-06 0.0003 14.9 0.0 3 47 161 208 161 251 0.76 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_20 - 518 AAA_17 PF13207.1 121 3.6e-05 17.8 0.1 1 1 3.4e-06 0.00014 15.9 0.0 1 23 227 249 227 342 0.74 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_50 - 262 AAA_17 PF13207.1 121 0.00014 15.9 0.0 1 1 4.7e-06 0.0002 15.4 0.0 2 38 102 133 101 232 0.74 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_8 - 383 MobB PF03205.9 140 2.3e-05 17.3 0.0 1 2 0.017 2.1 1.3 0.0 14 60 61 108 61 127 0.88 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_8 - 383 MobB PF03205.9 140 2.3e-05 17.3 0.0 2 2 3.1e-06 0.00039 13.4 0.0 5 26 162 183 160 193 0.90 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_50 - 262 PhoH PF02562.11 205 1.6e-08 27.2 0.1 1 1 2.9e-10 3.7e-08 26.0 0.1 3 61 83 142 81 179 0.77 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 MCM PF00493.18 331 0.00025 13.1 0.0 1 2 7.5e-06 0.00093 11.2 0.0 56 120 98 162 82 172 0.81 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 MCM PF00493.18 331 0.00025 13.1 0.0 2 2 0.034 4.3 -0.8 0.0 161 211 190 237 186 259 0.71 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_20 - 518 T2SE PF00437.15 272 1.4e-41 135.4 0.1 1 1 5.4e-43 3.4e-41 134.1 0.0 10 271 97 373 90 374 0.85 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_8 - 383 T2SE PF00437.15 272 1e-35 116.2 0.0 1 1 2.4e-37 1.5e-35 115.6 0.0 120 269 149 306 127 309 0.88 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_20 - 518 G-alpha PF00503.15 389 0.00095 11.1 0.0 1 2 0.098 12 -2.5 0.0 234 270 70 111 53 116 0.80 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_20 - 518 G-alpha PF00503.15 389 0.00095 11.1 0.0 2 2 1.9e-05 0.0024 9.7 0.0 58 87 225 254 214 312 0.83 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_43 - 565 NAD_binding_8 PF13450.1 68 4.4e-05 16.7 1.2 1 2 3.5e-07 4.4e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 NAD_binding_8 PF13450.1 68 4.4e-05 16.7 1.2 2 2 0.041 5.1 0.5 0.2 1 25 274 298 274 303 0.81 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 F420_oxidored PF03807.12 96 0.0088 9.7 4.1 1 2 0.0023 0.29 4.9 1.2 2 31 100 126 99 131 0.87 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 F420_oxidored PF03807.12 96 0.0088 9.7 4.1 2 2 0.0075 0.94 3.3 0.1 1 34 271 300 271 323 0.87 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_70 - 215 VirC1 PF07015.6 231 0.00051 12.4 0.0 1 2 0.00073 0.091 5.0 0.0 3 29 3 29 1 36 0.81 # 63961 # 64605 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_70 - 215 VirC1 PF07015.6 231 0.00051 12.4 0.0 2 2 0.00052 0.065 5.5 0.0 87 190 77 181 59 194 0.70 # 63961 # 64605 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_48 - 287 AAA_16 PF13191.1 185 1.7e-05 18.1 0.0 1 2 3.1e-05 0.00097 12.3 0.0 8 52 45 94 43 146 0.70 # 45917 # 46777 # 1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 1_48 - 287 AAA_16 PF13191.1 185 1.7e-05 18.1 0.0 2 2 0.015 0.48 3.6 0.0 139 183 134 184 114 186 0.72 # 45917 # 46777 # 1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 1_20 - 518 AAA_16 PF13191.1 185 9e-05 15.7 0.0 1 1 9.1e-06 0.00029 14.1 0.0 8 52 213 254 212 330 0.81 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_50 - 262 AAA_16 PF13191.1 185 0.00018 14.7 0.1 1 1 1.4e-05 0.00043 13.5 0.1 23 51 98 126 84 166 0.79 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_8 - 383 AAA_16 PF13191.1 185 0.00037 13.7 0.0 1 1 2.5e-05 0.00077 12.7 0.0 27 52 160 188 148 282 0.82 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_20 - 518 AAA_23 PF13476.1 202 0.00024 14.7 0.0 1 1 1.1e-05 0.00069 13.2 0.0 20 38 226 244 209 249 0.86 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_8 - 383 AAA_23 PF13476.1 202 0.00028 14.5 0.0 1 1 7.3e-06 0.00046 13.8 0.0 19 40 157 178 142 209 0.83 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_8 - 383 AAA_18 PF13238.1 129 1.9e-05 18.2 0.0 1 1 6e-07 3.8e-05 17.3 0.0 2 42 161 197 161 230 0.83 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_20 - 518 AAA_18 PF13238.1 129 0.00042 13.9 0.0 1 1 2.2e-05 0.0014 12.2 0.0 1 18 228 245 228 312 0.86 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_70 - 215 CbiA PF01656.18 195 1.5e-09 30.7 0.1 1 1 1.8e-11 2.2e-09 30.2 0.1 1 145 4 124 4 173 0.79 # 63961 # 64605 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_43 - 565 HI0933_like PF03486.9 409 2.8e-08 25.8 3.7 1 2 1.2e-06 0.00015 13.5 2.5 2 33 99 130 98 138 0.91 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 HI0933_like PF03486.9 409 2.8e-08 25.8 3.7 2 2 7.2e-06 0.0009 10.9 0.0 82 164 284 366 276 385 0.83 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_50 - 262 AAA_29 PF13555.1 62 1.7e-05 17.5 0.0 1 1 8.4e-07 3.5e-05 16.5 0.0 5 47 80 125 78 136 0.83 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_20 - 518 AAA_29 PF13555.1 62 3.3e-05 16.6 0.0 1 1 1.6e-06 6.7e-05 15.6 0.0 21 40 224 242 216 254 0.83 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_8 - 383 AAA_29 PF13555.1 62 4.8e-05 16.1 0.0 1 1 3.4e-06 0.00014 14.6 0.0 26 44 160 178 151 186 0.83 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_43 - 565 FAD_binding_2 PF00890.19 417 5.4e-06 18.6 4.7 1 3 4.3e-08 5.4e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 FAD_binding_2 PF00890.19 417 5.4e-06 18.6 4.7 2 3 0.034 4.3 -0.8 0.1 143 204 311 369 297 388 0.72 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 FAD_binding_2 PF00890.19 417 5.4e-06 18.6 4.7 3 3 0.074 9.3 -1.9 0.0 376 402 388 408 377 424 0.82 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_50 - 262 AAA PF00004.24 132 1.3e-07 25.1 0.0 1 1 3.5e-09 2.2e-07 24.4 0.0 1 111 102 202 102 230 0.70 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_20 - 518 AAA PF00004.24 132 0.00069 13.1 0.0 1 2 0.00066 0.041 7.3 0.0 1 21 228 248 228 277 0.83 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_20 - 518 AAA PF00004.24 132 0.00069 13.1 0.0 2 2 0.068 4.2 0.8 0.0 9 66 442 508 436 515 0.62 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_50 - 262 Bac_DnaA PF00308.13 219 1.6e-10 34.2 0.0 1 1 2.1e-12 2.6e-10 33.5 0.0 36 136 101 199 80 221 0.87 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_43 - 565 Pyr_redox_3 PF13738.1 203 1.6e-17 57.4 0.1 1 2 4.4e-14 5.6e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 Pyr_redox_3 PF13738.1 203 1.6e-17 57.4 0.1 2 2 9e-07 0.00011 15.5 0.0 93 147 320 375 309 430 0.76 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_48 - 287 TniB PF05621.6 302 4.3e-201 659.2 5.6 1 1 3.8e-203 4.8e-201 659.0 5.6 1 285 1 285 1 286 1.00 # 45917 # 46777 # 1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 1_103 - 777 TraG-D_C PF12696.2 128 4.1e-07 23.2 0.1 1 1 7.3e-09 9.1e-07 22.0 0.1 1 88 437 524 437 553 0.83 # 90488 # 92818 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 AAA_33 PF13671.1 143 0.00046 13.3 0.2 1 1 8.9e-06 0.0011 12.1 0.2 2 36 102 142 102 255 0.67 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 KTI12 PF08433.5 270 0.00022 13.7 0.4 1 2 6.4e-05 0.008 8.6 0.0 4 81 102 172 101 174 0.68 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 KTI12 PF08433.5 270 0.00022 13.7 0.4 2 2 0.0037 0.46 2.8 0.1 34 59 232 257 212 261 0.77 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 DnaB_C PF03796.10 259 0.00019 13.6 0.0 1 1 2.4e-06 0.0003 12.9 0.0 16 55 96 135 85 158 0.90 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_79 - 228 Methyltransf_26 PF13659.1 117 1.5e-11 37.7 0.1 1 2 2.6e-07 3.2e-05 17.2 0.0 57 114 7 71 2 74 0.69 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_79 - 228 Methyltransf_26 PF13659.1 117 1.5e-11 37.7 0.1 2 2 1e-07 1.3e-05 18.5 0.0 4 44 167 206 164 221 0.82 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_20 - 518 AAA_30 PF13604.1 196 0.00022 14.0 0.0 1 1 6.4e-06 0.0004 13.2 0.0 4 44 211 251 209 280 0.86 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_50 - 262 AAA_30 PF13604.1 196 0.00059 12.7 0.2 1 1 2.8e-05 0.0017 11.1 0.1 16 49 97 131 87 162 0.73 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_11 - 195 DNA_pol3_delta PF06144.8 172 2.6e-06 20.2 0.0 1 1 3e-08 3.8e-06 19.7 0.0 35 99 92 152 74 179 0.80 # 10355 # 10939 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.407 1_20 - 518 ABC_tran PF00005.22 137 0.00011 15.8 0.0 1 1 4.4e-06 0.00027 14.5 0.0 12 40 226 255 216 298 0.81 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_8 - 383 ABC_tran PF00005.22 137 0.00014 15.4 0.0 1 1 4.3e-06 0.00027 14.5 0.0 16 35 162 181 152 211 0.87 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_43 - 565 K_oxygenase PF13434.1 341 7.1e-06 18.3 0.0 1 3 0.0039 0.49 2.4 0.0 187 220 94 125 59 130 0.79 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 K_oxygenase PF13434.1 341 7.1e-06 18.3 0.0 2 3 3.3e-06 0.00042 12.5 0.0 132 231 218 308 202 332 0.82 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 K_oxygenase PF13434.1 341 7.1e-06 18.3 0.0 3 3 0.057 7.1 -1.4 0.0 132 160 346 369 314 377 0.67 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_79 - 228 Cons_hypoth95 PF03602.10 183 1.1e-05 18.1 0.0 1 2 0.00027 0.033 6.8 0.0 112 168 18 76 9 83 0.68 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_79 - 228 Cons_hypoth95 PF03602.10 183 1.1e-05 18.1 0.0 2 2 3.9e-05 0.0049 9.5 0.0 41 62 162 183 145 219 0.78 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_20 - 518 DAP3 PF10236.4 309 0.00079 11.6 0.0 1 1 1.2e-05 0.0015 10.7 0.0 21 42 223 244 214 253 0.86 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_50 - 262 RuvB_N PF05496.7 234 0.00066 12.0 0.0 1 1 7.1e-06 0.00089 11.5 0.0 48 75 97 124 45 170 0.84 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 AAA_19 PF13245.1 76 4.6e-07 22.8 0.0 1 1 1.9e-08 1.2e-06 21.4 0.0 11 37 101 126 95 147 0.81 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_20 - 518 AAA_19 PF13245.1 76 0.00012 15.0 0.0 1 1 5.3e-06 0.00033 13.6 0.0 10 46 226 259 218 270 0.79 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_119 - 1015 AAA_10 PF12846.2 304 7.3e-31 100.9 0.0 1 1 5.3e-32 1.7e-30 99.7 0.0 8 302 502 897 498 898 0.89 # 105309 # 108353 # -1 # ID=1_119;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.510 1_103 - 777 AAA_10 PF12846.2 304 3.3e-05 16.6 1.0 1 1 3.2e-06 0.0001 15.0 1.0 2 287 137 501 136 514 0.62 # 90488 # 92818 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.501 1_20 - 518 AAA_10 PF12846.2 304 0.00027 13.6 0.0 1 1 1.7e-05 0.00053 12.7 0.0 4 30 228 256 226 304 0.78 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_8 - 383 AAA_10 PF12846.2 304 0.00064 12.4 0.0 1 1 4e-05 0.0013 11.4 0.0 2 21 158 177 157 196 0.83 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_43 - 565 FAD_oxidored PF12831.2 428 3.6e-06 19.4 3.6 1 1 2.9e-08 3.6e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 DAO PF01266.19 358 5.3e-09 28.6 11.7 1 3 1.4e-08 1.7e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 DAO PF01266.19 358 5.3e-09 28.6 11.7 2 3 0.032 4 -0.6 0.1 3 31 273 301 271 307 0.75 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 DAO PF01266.19 358 5.3e-09 28.6 11.7 3 3 9.4e-07 0.00012 14.3 0.5 152 208 314 372 307 433 0.74 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 NAD_binding_9 PF13454.1 156 3.6e-05 16.8 2.8 1 3 0.0081 1 2.3 0.1 1 41 101 135 101 162 0.81 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 NAD_binding_9 PF13454.1 156 3.6e-05 16.8 2.8 2 3 0.034 4.2 0.3 0.0 134 155 218 241 202 242 0.72 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 NAD_binding_9 PF13454.1 156 3.6e-05 16.8 2.8 3 3 6.6e-06 0.00083 12.4 0.1 112 155 321 366 311 367 0.85 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_50 - 262 DUF815 PF05673.8 250 0.00028 13.1 0.0 1 1 3.6e-06 0.00045 12.4 0.0 23 76 65 122 46 139 0.79 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_43 - 565 Pyr_redox PF00070.22 80 4.5e-20 65.1 6.0 1 2 1.4e-06 0.00018 15.2 1.5 1 31 99 129 99 131 0.96 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 Pyr_redox PF00070.22 80 4.5e-20 65.1 6.0 2 2 6.2e-18 7.8e-16 51.6 0.2 1 74 271 345 271 354 0.90 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_99 - 283 Methyltransf_27 PF13708.1 194 1.3e-66 217.0 0.0 1 1 1.4e-68 1.8e-66 216.6 0.0 2 194 85 278 84 278 0.96 # 85947 # 86795 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_103 - 777 TrwB_AAD_bind PF10412.4 386 1.3e-06 20.5 0.2 1 2 9.5e-05 0.012 7.4 0.0 11 32 132 153 126 157 0.84 # 90488 # 92818 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.501 1_103 - 777 TrwB_AAD_bind PF10412.4 386 1.3e-06 20.5 0.2 2 2 1.4e-05 0.0017 10.2 0.1 247 332 440 525 427 542 0.88 # 90488 # 92818 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 AAA_11 PF13086.1 236 0.00056 12.7 0.3 1 1 8.7e-06 0.0011 11.8 0.3 6 44 89 142 82 260 0.72 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 Sigma54_activ_2 PF14532.1 138 0.00037 13.8 0.1 1 1 7.7e-06 0.00096 12.4 0.0 3 44 79 122 77 151 0.81 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_48 - 287 AAA_32 PF13654.1 509 0.00017 13.5 0.1 1 2 6.6e-06 0.00082 11.3 0.0 8 81 34 112 26 124 0.86 # 45917 # 46777 # 1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 1_48 - 287 AAA_32 PF13654.1 509 0.00017 13.5 0.1 2 2 0.02 2.6 -0.3 0.1 472 502 255 285 242 286 0.89 # 45917 # 46777 # 1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 1_79 - 228 MethyltransfD12 PF02086.10 260 0.00051 12.7 0.0 1 2 0.014 1.8 1.1 0.0 175 188 18 31 8 91 0.80 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_79 - 228 MethyltransfD12 PF02086.10 260 0.00051 12.7 0.0 2 2 4e-05 0.005 9.5 0.0 20 46 163 189 148 197 0.78 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_8 - 383 RNA_helicase PF00910.17 107 0.00012 15.5 0.0 1 1 1.9e-06 0.00024 14.5 0.0 2 28 161 187 160 205 0.83 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_43 - 565 AlaDh_PNT_C PF01262.16 168 3e-05 16.9 3.1 1 2 0.00051 0.064 6.0 0.8 15 50 92 127 89 130 0.90 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_43 - 565 AlaDh_PNT_C PF01262.16 168 3e-05 16.9 3.1 2 2 2.1e-05 0.0026 10.5 0.1 16 58 265 307 257 339 0.84 # 41149 # 42843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_50 - 262 NACHT PF05729.7 166 0.0015 11.4 2.1 1 2 5.9e-05 0.0074 9.2 0.3 3 23 102 122 100 148 0.84 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 NACHT PF05729.7 166 0.0015 11.4 2.1 2 2 0.012 1.4 1.7 0.1 80 127 156 200 139 221 0.76 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 AAA_25 PF13481.1 194 0.00014 14.6 0.0 1 1 5.4e-06 0.00022 13.8 0.0 29 57 95 123 76 170 0.86 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_8 - 383 AAA_25 PF13481.1 194 0.00024 13.7 0.0 1 1 1.1e-05 0.00044 12.9 0.0 24 58 148 182 124 207 0.78 # 7542 # 8690 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_20 - 518 AAA_25 PF13481.1 194 0.00037 13.1 0.0 1 2 0.00011 0.0047 9.5 0.0 19 65 211 260 200 270 0.72 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_20 - 518 AAA_25 PF13481.1 194 0.00037 13.1 0.0 2 2 0.069 2.9 0.4 0.0 153 190 297 337 292 340 0.73 # 18477 # 20030 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_79 - 228 Methyltransf_15 PF09445.5 164 0.00099 11.9 0.0 1 2 0.045 5.6 -0.3 0.0 53 79 4 29 2 32 0.90 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_79 - 228 Methyltransf_15 PF09445.5 164 0.00099 11.9 0.0 2 2 4.3e-05 0.0054 9.5 0.0 3 31 166 194 164 208 0.86 # 71788 # 72471 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_50 - 262 AAA_28 PF13521.1 163 1.1e-05 18.6 1.1 1 1 4.6e-07 5.7e-05 16.3 0.8 1 24 101 124 101 239 0.90 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 262 AAA_5 PF07728.9 139 0.00024 14.1 0.2 1 1 4.3e-06 0.00054 12.9 0.2 1 19 101 119 101 243 0.78 # 48389 # 49174 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/8432de84-6ed2-4a51-8cdd-f3dd16caf440 # Target file: checkm_output/bins/pm936/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm936/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8432de84-6ed2-4a51-8cdd-f3dd16caf440 checkm_output/bins/pm936/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:11:19 2020 # [ok]