# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_12 - 262 Mg_chelatase PF01078.16 207 0.0007 12.1 0.0 1 1 1.1e-05 0.0015 11.1 0.0 23 43 100 120 96 153 0.86 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_9 - 228 UPF0020 PF01170.13 180 1.7e-05 17.9 0.0 1 2 0.00026 0.036 7.0 0.0 103 123 17 37 4 88 0.71 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_9 - 228 UPF0020 PF01170.13 180 1.7e-05 17.9 0.0 2 2 6.4e-05 0.0088 9.0 0.0 28 54 163 188 158 220 0.67 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_82 - 503 Rad17 PF03215.10 519 0.0017 10.4 0.0 1 1 1.8e-05 0.0026 9.8 0.0 42 69 226 253 217 264 0.81 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_12 - 262 IstB_IS21 PF01695.12 178 4.3e-69 224.8 0.1 1 1 4.1e-71 5.7e-69 224.4 0.1 2 177 55 230 54 231 0.98 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_9 - 209 MipZ PF09140.6 261 2.6e-21 69.2 0.5 1 2 1.2e-12 1.6e-10 33.8 0.0 2 53 2 52 1 60 0.89 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 3_9 - 209 MipZ PF09140.6 261 2.6e-21 69.2 0.5 2 2 1.6e-12 2.2e-10 33.4 0.0 87 140 65 118 58 128 0.92 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 3_9 - 209 YhjQ PF06564.7 244 3.2e-05 16.7 0.3 1 2 1.8e-06 0.00025 13.8 0.3 4 38 3 37 1 50 0.89 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 3_9 - 209 YhjQ PF06564.7 244 3.2e-05 16.7 0.3 2 2 0.029 4.1 0.0 0.0 108 144 69 103 44 113 0.78 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 565 3HCDH_N PF02737.13 180 0.0044 10.0 6.4 1 2 0.0047 0.66 2.9 2.4 1 30 99 128 99 134 0.93 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 3HCDH_N PF02737.13 180 0.0044 10.0 6.4 2 2 9e-05 0.013 8.6 0.1 2 39 272 309 271 348 0.73 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 GIDA PF01134.17 392 3.6e-08 26.0 6.6 1 3 3.5e-10 4.8e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 GIDA PF01134.17 392 3.6e-08 26.0 6.6 2 3 0.038 5.3 -0.9 0.0 3 31 273 301 271 315 0.84 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 GIDA PF01134.17 392 3.6e-08 26.0 6.6 3 3 0.018 2.6 0.1 0.1 349 385 393 429 387 433 0.77 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_18 - 176 SSB PF00436.20 104 4.8e-41 132.3 0.4 1 1 4.5e-43 6.3e-41 131.9 0.4 1 101 6 109 6 112 0.96 # 12994 # 13521 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.587 2_20 - 565 Pyr_redox_2 PF07992.9 201 1.1e-43 142.8 0.0 1 1 3.2e-45 4.5e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_35 - 767 DUF87 PF01935.12 229 0.00043 13.5 0.0 1 2 5e-05 0.0035 10.5 0.0 16 40 130 153 120 168 0.80 # 27489 # 29789 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_35 - 767 DUF87 PF01935.12 229 0.00043 13.5 0.0 2 2 0.088 6.1 -0.1 0.0 111 172 640 700 622 726 0.63 # 27489 # 29789 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_68 - 383 DUF87 PF01935.12 229 0.00077 12.7 0.0 1 1 2.1e-05 0.0015 11.8 0.0 28 46 162 180 161 192 0.87 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 1_68 - 383 NB-ARC PF00931.17 287 0.00041 12.6 0.0 1 2 9.7e-06 0.0014 10.9 0.0 18 49 156 185 145 192 0.81 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 1_68 - 383 NB-ARC PF00931.17 287 0.00041 12.6 0.0 2 2 0.069 9.6 -1.7 0.0 208 236 331 357 326 367 0.70 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 2_15 - 287 AAA_22 PF13401.1 131 5.2e-17 55.6 0.0 1 1 2.7e-18 9.3e-17 54.8 0.0 7 126 64 190 59 194 0.94 # 13976 # 14836 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 2_12 - 262 AAA_22 PF13401.1 131 3.8e-06 20.5 0.1 1 2 1.1e-05 0.00038 14.0 0.2 2 28 97 123 96 159 0.74 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_12 - 262 AAA_22 PF13401.1 131 3.8e-06 20.5 0.1 2 2 0.0083 0.29 4.7 0.0 87 117 151 196 132 204 0.62 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_68 - 383 AAA_22 PF13401.1 131 5.2e-06 20.0 0.0 1 1 3e-07 1.1e-05 19.0 0.0 3 48 156 198 153 233 0.77 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 1_82 - 503 AAA_22 PF13401.1 131 7.2e-06 19.6 0.0 1 1 4e-07 1.4e-05 18.6 0.0 4 49 229 281 225 330 0.84 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 1_9 - 228 Methyltransf_11 PF08241.7 95 0.00088 13.2 0.0 1 2 0.0024 0.34 4.9 0.0 78 93 53 68 48 70 0.84 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_9 - 228 Methyltransf_11 PF08241.7 95 0.00088 13.2 0.0 2 2 0.0014 0.19 5.7 0.0 5 54 172 220 168 226 0.82 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_20 - 565 DFP PF04127.10 185 0.0011 12.0 2.4 1 2 0.00039 0.055 6.4 0.4 28 51 105 128 99 156 0.83 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 DFP PF04127.10 185 0.0011 12.0 2.4 2 2 0.0014 0.19 4.7 0.1 32 53 281 302 276 336 0.77 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_9 - 209 SRP54 PF00448.17 196 3.4e-07 23.2 0.1 1 1 1.5e-08 2.1e-06 20.7 0.1 4 98 2 91 1 134 0.80 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_12 - 262 AAA_3 PF07726.6 131 0.00071 12.6 0.0 1 1 1.2e-05 0.0017 11.4 0.0 2 72 102 171 101 201 0.70 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_20 - 565 NAD_binding_7 PF13241.1 103 4.7e-07 23.4 1.2 1 2 5.4e-05 0.0075 9.9 0.2 9 38 99 128 96 184 0.89 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 NAD_binding_7 PF13241.1 103 4.7e-07 23.4 1.2 2 2 1.4e-05 0.002 11.8 0.1 8 41 270 306 264 380 0.74 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_9 - 228 N6_N4_Mtase PF01555.13 231 6.2e-37 120.6 0.0 1 1 1.8e-36 2.5e-34 112.1 0.0 1 228 21 200 21 203 0.91 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 3_9 - 209 AAA_17 PF13207.1 121 2.1e-05 18.7 0.0 1 1 1.6e-06 5.7e-05 17.3 0.0 9 77 11 84 9 205 0.75 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_82 - 503 AAA_17 PF13207.1 121 7.3e-05 17.0 0.0 1 1 5.5e-06 0.00019 15.6 0.0 1 32 231 264 231 361 0.79 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_12 - 262 AAA_17 PF13207.1 121 0.00015 15.9 0.0 1 1 6.3e-06 0.00022 15.4 0.0 2 38 102 133 101 232 0.74 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_68 - 383 AAA_17 PF13207.1 121 0.00054 14.2 0.0 1 1 3.6e-05 0.0013 13.0 0.0 3 22 161 180 161 245 0.81 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 3_9 - 209 MobB PF03205.9 140 7.9e-05 15.8 0.1 1 1 1.6e-06 0.00022 14.3 0.0 10 42 11 41 1 46 0.79 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 3_9 - 209 ArsA_ATPase PF02374.10 305 6.1e-08 25.4 0.9 1 3 1.2e-09 1.6e-07 24.0 0.1 3 48 3 48 1 69 0.85 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 3_9 - 209 ArsA_ATPase PF02374.10 305 6.1e-08 25.4 0.9 2 3 0.053 7.4 -1.2 0.0 121 135 69 85 47 86 0.75 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 3_9 - 209 ArsA_ATPase PF02374.10 305 6.1e-08 25.4 0.9 3 3 0.075 10 -1.7 0.0 205 234 132 161 118 202 0.65 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_12 - 262 PhoH PF02562.11 205 1.7e-08 27.2 0.1 1 1 2.9e-10 4.1e-08 26.0 0.1 3 61 83 142 81 179 0.77 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_12 - 262 MCM PF00493.18 331 0.00028 13.1 0.0 1 2 7.5e-06 0.001 11.2 0.0 56 120 98 162 82 172 0.81 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_12 - 262 MCM PF00493.18 331 0.00028 13.1 0.0 2 2 0.034 4.7 -0.8 0.0 161 211 190 237 186 259 0.71 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_82 - 503 T2SE PF00437.15 272 3.8e-38 124.2 0.0 1 1 8.5e-40 5.9e-38 123.6 0.0 66 269 161 378 143 381 0.87 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 1_68 - 383 T2SE PF00437.15 272 1.1e-34 112.9 0.0 1 1 2.2e-36 1.5e-34 112.5 0.0 111 261 144 292 23 309 0.79 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 1_82 - 503 Zeta_toxin PF06414.7 201 0.0012 11.4 0.0 1 1 1.4e-05 0.002 10.6 0.0 18 39 231 252 216 259 0.79 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_20 - 565 NAD_binding_8 PF13450.1 68 4.9e-05 16.7 1.2 1 2 3.5e-07 4.9e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 NAD_binding_8 PF13450.1 68 4.9e-05 16.7 1.2 2 2 0.041 5.7 0.5 0.2 1 25 274 298 274 303 0.81 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 F420_oxidored PF03807.12 96 0.0098 9.7 4.1 1 2 0.0023 0.32 4.9 1.2 2 31 100 126 99 131 0.87 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 F420_oxidored PF03807.12 96 0.0098 9.7 4.1 2 2 0.0075 1 3.3 0.1 1 34 271 300 271 323 0.87 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_9 - 209 VirC1 PF07015.6 231 4.7e-09 29.0 0.0 1 1 7.1e-11 9.9e-09 27.9 0.0 3 172 2 164 1 206 0.74 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 3_9 - 209 Fer4_NifH PF00142.13 273 0.0001 14.9 0.2 1 1 2.3e-06 0.00032 13.3 0.0 8 38 9 39 2 46 0.89 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_15 - 287 AAA_16 PF13191.1 185 1.9e-05 18.1 0.0 1 2 3.1e-05 0.0011 12.3 0.0 8 52 45 94 43 146 0.70 # 13976 # 14836 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 2_15 - 287 AAA_16 PF13191.1 185 1.9e-05 18.1 0.0 2 2 0.015 0.54 3.6 0.0 139 183 134 184 114 186 0.72 # 13976 # 14836 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_82 - 503 AAA_16 PF13191.1 185 4.5e-05 16.9 0.0 1 1 2.2e-06 7.8e-05 16.1 0.0 13 52 222 263 216 369 0.84 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 1_68 - 383 AAA_16 PF13191.1 185 4.9e-05 16.7 0.1 1 1 4e-06 0.00014 15.2 0.1 25 62 158 192 148 338 0.76 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 2_12 - 262 AAA_16 PF13191.1 185 0.0002 14.7 0.1 1 1 1.4e-05 0.00048 13.5 0.1 23 51 98 126 84 166 0.79 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_68 - 383 AAA_23 PF13476.1 202 2.5e-05 18.1 0.0 1 1 6.7e-07 4.7e-05 17.1 0.0 20 46 158 185 144 219 0.81 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 1_82 - 503 AAA_23 PF13476.1 202 0.00011 16.0 0.0 1 1 2.9e-06 0.0002 15.1 0.0 20 37 230 247 225 262 0.90 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 1_68 - 383 AAA_18 PF13238.1 129 0.00015 15.5 0.0 1 1 1.9e-06 0.00027 14.6 0.0 2 38 161 193 161 238 0.71 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 3_9 - 209 CbiA PF01656.18 195 2.5e-22 72.6 0.0 1 1 3.1e-24 4.3e-22 71.8 0.0 1 158 3 141 3 179 0.75 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_82 - 503 AAA_14 PF13173.1 128 0.0015 11.8 0.0 1 1 2.2e-05 0.0031 10.8 0.0 3 30 230 255 228 267 0.86 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_20 - 565 HI0933_like PF03486.9 409 3.1e-08 25.8 3.7 1 2 1.2e-06 0.00017 13.5 2.5 2 33 99 130 98 138 0.91 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 HI0933_like PF03486.9 409 3.1e-08 25.8 3.7 2 2 7.2e-06 0.001 10.9 0.0 82 164 284 366 276 385 0.83 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_12 - 262 AAA_29 PF13555.1 62 1.9e-05 17.5 0.0 1 1 8.4e-07 3.9e-05 16.5 0.0 5 47 80 125 78 136 0.83 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_82 - 503 AAA_29 PF13555.1 62 2.2e-05 17.3 0.0 1 1 1.2e-06 5.5e-05 16.1 0.0 20 40 227 246 219 255 0.84 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 1_68 - 383 AAA_29 PF13555.1 62 3e-05 16.9 0.0 1 1 1.6e-06 7.5e-05 15.6 0.0 25 43 159 177 149 185 0.84 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 2_20 - 565 FAD_binding_2 PF00890.19 417 6e-06 18.6 4.7 1 3 4.3e-08 6e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 FAD_binding_2 PF00890.19 417 6e-06 18.6 4.7 2 3 0.034 4.8 -0.8 0.1 143 204 311 369 297 388 0.72 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 FAD_binding_2 PF00890.19 417 6e-06 18.6 4.7 3 3 0.074 10 -1.9 0.0 376 402 388 408 377 424 0.82 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_12 - 262 AAA PF00004.24 132 1.4e-07 25.1 0.0 1 1 1.8e-09 2.5e-07 24.4 0.0 1 111 102 202 102 230 0.70 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_12 - 262 Bac_DnaA PF00308.13 219 1.8e-10 34.2 0.0 1 1 2.1e-12 2.9e-10 33.5 0.0 36 136 101 199 80 221 0.87 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_5 - 139 Ribosomal_S8 PF00410.14 129 0.0018 11.5 1.8 1 2 0.0059 0.82 2.9 0.1 41 73 2 29 1 35 0.56 # 3095 # 3511 # 1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.360 4_5 - 139 Ribosomal_S8 PF00410.14 129 0.0018 11.5 1.8 2 2 0.00012 0.017 8.4 0.1 50 87 90 128 50 135 0.79 # 3095 # 3511 # 1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.360 1_68 - 383 Sigma54_activat PF00158.21 168 0.00091 12.1 0.0 1 1 1.3e-05 0.0018 11.2 0.0 26 47 161 182 145 193 0.84 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 2_20 - 565 Pyr_redox_3 PF13738.1 203 1.8e-17 57.4 0.1 1 2 4.4e-14 6.2e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 Pyr_redox_3 PF13738.1 203 1.8e-17 57.4 0.1 2 2 9e-07 0.00013 15.5 0.0 93 147 320 375 309 430 0.76 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_15 - 287 TniB PF05621.6 302 4.8e-201 659.2 5.6 1 1 3.8e-203 5.3e-201 659.0 5.6 1 285 1 285 1 286 1.00 # 13976 # 14836 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_35 - 767 TraG-D_C PF12696.2 128 6.9e-08 25.8 0.2 1 1 5e-10 6.9e-08 25.8 0.2 1 90 437 525 437 558 0.83 # 27489 # 29789 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_9 - 209 AAA_31 PF13614.1 157 6e-06 19.6 0.0 1 2 2.5e-07 3.5e-05 17.1 0.0 2 42 2 42 1 55 0.88 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 3_9 - 209 AAA_31 PF13614.1 157 6e-06 19.6 0.0 2 2 0.055 7.6 -0.2 0.0 109 127 68 86 62 113 0.68 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_12 - 262 AAA_33 PF13671.1 143 0.00051 13.3 0.2 1 1 1.8e-05 0.0012 12.1 0.2 2 36 102 142 102 255 0.67 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_82 - 503 AAA_33 PF13671.1 143 0.00088 12.5 0.0 1 1 3.2e-05 0.0022 11.2 0.0 1 19 231 249 231 333 0.71 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_12 - 262 KTI12 PF08433.5 270 0.00024 13.7 0.4 1 2 6.4e-05 0.0089 8.6 0.0 4 81 102 172 101 174 0.68 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_12 - 262 KTI12 PF08433.5 270 0.00024 13.7 0.4 2 2 0.0037 0.51 2.8 0.1 34 59 232 257 212 261 0.77 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_12 - 262 DnaB_C PF03796.10 259 0.00021 13.6 0.0 1 1 2.4e-06 0.00034 12.9 0.0 16 55 96 135 85 158 0.90 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_9 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 38.1 0.0 1 2 1.5e-07 2.1e-05 17.9 0.0 57 114 7 71 2 74 0.72 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_9 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 38.1 0.0 2 2 1.3e-07 1.8e-05 18.1 0.0 4 44 167 206 164 221 0.82 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_51 - 720 Bac_GDH PF05088.7 1528 0.0014 9.4 0.1 1 1 1.4e-05 0.0019 8.9 0.1 365 464 258 363 248 375 0.80 # 38343 # 40502 # -1 # ID=1_51;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_82 - 503 AAA_30 PF13604.1 196 9.3e-09 28.5 0.0 1 1 2.5e-10 1.7e-08 27.6 0.0 2 45 213 256 212 263 0.92 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_12 - 262 AAA_30 PF13604.1 196 0.00065 12.7 0.2 1 1 2.8e-05 0.0019 11.1 0.1 16 49 97 131 87 162 0.73 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_68 - 383 FtsK_SpoIIIE PF01580.13 205 0.00098 12.0 0.0 1 1 1.2e-05 0.0016 11.2 0.0 40 60 159 179 128 231 0.80 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 1_61 - 238 AAA_27 PF13514.1 1111 0.00049 11.2 2.7 1 1 4.5e-06 0.00063 10.8 2.7 316 391 97 171 94 182 0.90 # 48278 # 48991 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.594 1_68 - 383 ABC_tran PF00005.22 137 2.9e-05 17.7 0.0 1 1 8.1e-07 5.6e-05 16.8 0.0 15 37 161 183 150 212 0.84 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 1_82 - 503 ABC_tran PF00005.22 137 0.00049 13.8 0.0 1 1 1.2e-05 0.00086 13.0 0.0 12 37 230 255 224 364 0.90 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_20 - 565 K_oxygenase PF13434.1 341 7.9e-06 18.3 0.0 1 3 0.0039 0.55 2.4 0.0 187 220 94 125 59 130 0.79 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 K_oxygenase PF13434.1 341 7.9e-06 18.3 0.0 2 3 3.3e-06 0.00047 12.5 0.0 132 231 218 308 202 332 0.82 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 K_oxygenase PF13434.1 341 7.9e-06 18.3 0.0 3 3 0.057 7.9 -1.4 0.0 132 160 346 369 314 377 0.67 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_9 - 228 Cons_hypoth95 PF03602.10 183 1.7e-05 17.6 0.0 1 2 0.00039 0.054 6.2 0.0 112 146 18 54 9 81 0.65 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_9 - 228 Cons_hypoth95 PF03602.10 183 1.7e-05 17.6 0.0 2 2 3.9e-05 0.0055 9.5 0.0 41 62 162 183 145 219 0.78 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_12 - 262 RuvB_N PF05496.7 234 0.00073 12.0 0.0 1 1 7.1e-06 0.00099 11.5 0.0 48 75 97 124 45 170 0.84 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_12 - 262 AAA_19 PF13245.1 76 5.2e-07 22.8 0.0 1 1 2.9e-08 1.4e-06 21.4 0.0 11 37 101 126 95 147 0.81 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_82 - 503 AAA_19 PF13245.1 76 1.6e-06 21.2 0.0 1 1 8.7e-08 4e-06 19.9 0.0 1 36 219 255 219 272 0.76 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 3_9 - 209 AAA_19 PF13245.1 76 0.0004 13.5 0.1 1 2 0.00029 0.013 8.6 0.0 20 48 11 35 9 44 0.84 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 3_9 - 209 AAA_19 PF13245.1 76 0.0004 13.5 0.1 2 2 0.032 1.5 2.1 0.0 42 63 135 158 118 184 0.76 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_55 - 1015 AAA_10 PF12846.2 304 2.5e-31 102.5 0.0 1 1 2.6e-32 7.1e-31 101.0 0.0 8 303 502 898 498 899 0.92 # 42926 # 45970 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.580 1_35 - 767 AAA_10 PF12846.2 304 1.2e-06 21.5 0.2 1 1 8.8e-08 2.4e-06 20.5 0.2 2 292 137 506 136 516 0.68 # 27489 # 29789 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_68 - 383 AAA_10 PF12846.2 304 2.8e-05 17.0 0.2 1 2 1.7e-05 0.00049 12.9 0.1 3 22 159 178 157 187 0.85 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 1_68 - 383 AAA_10 PF12846.2 304 2.8e-05 17.0 0.2 2 2 0.017 0.49 3.1 0.0 178 247 256 347 173 352 0.54 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 3_9 - 209 AAA_10 PF12846.2 304 0.00022 14.1 0.0 1 1 1.3e-05 0.00035 13.4 0.0 11 39 11 39 3 66 0.90 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_82 - 503 AAA_10 PF12846.2 304 0.00078 12.3 0.0 1 1 4.2e-05 0.0012 11.7 0.0 4 28 232 256 229 362 0.77 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_20 - 565 FAD_oxidored PF12831.2 428 4.1e-06 19.4 3.6 1 1 2.9e-08 4.1e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 DAO PF01266.19 358 5.9e-09 28.6 11.7 1 3 1.4e-08 1.9e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 DAO PF01266.19 358 5.9e-09 28.6 11.7 2 3 0.032 4.4 -0.6 0.1 3 31 273 301 271 307 0.75 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 DAO PF01266.19 358 5.9e-09 28.6 11.7 3 3 9.4e-07 0.00013 14.3 0.5 152 208 314 372 307 433 0.74 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 NAD_binding_9 PF13454.1 156 4e-05 16.8 2.8 1 3 0.0081 1.1 2.3 0.1 1 41 101 135 101 162 0.81 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 NAD_binding_9 PF13454.1 156 4e-05 16.8 2.8 2 3 0.034 4.7 0.3 0.0 134 155 218 241 202 242 0.72 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 NAD_binding_9 PF13454.1 156 4e-05 16.8 2.8 3 3 6.6e-06 0.00092 12.4 0.1 112 155 321 366 311 367 0.85 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_82 - 503 DEAD PF00270.24 169 0.0015 11.4 0.0 1 1 1.6e-05 0.0022 10.8 0.0 3 39 216 254 214 340 0.82 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_12 - 262 DUF815 PF05673.8 250 0.00031 13.1 0.0 1 1 3.6e-06 0.0005 12.4 0.0 23 76 65 122 46 139 0.79 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_20 - 565 Pyr_redox PF00070.22 80 5e-20 65.1 6.0 1 2 1.4e-06 0.0002 15.2 1.5 1 31 99 129 99 131 0.96 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 Pyr_redox PF00070.22 80 5e-20 65.1 6.0 2 2 6.2e-18 8.7e-16 51.6 0.2 1 74 271 345 271 354 0.90 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_31 - 283 Methyltransf_27 PF13708.1 194 3.7e-67 219.0 0.0 1 1 3.6e-69 5e-67 218.5 0.0 2 194 85 278 84 278 0.96 # 22702 # 23550 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_35 - 767 TrwB_AAD_bind PF10412.4 386 7e-07 21.5 0.2 1 2 0.00021 0.029 6.3 0.0 11 32 132 153 126 164 0.80 # 27489 # 29789 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_35 - 767 TrwB_AAD_bind PF10412.4 386 7e-07 21.5 0.2 2 2 2.5e-06 0.00034 12.6 0.1 260 332 452 525 435 578 0.75 # 27489 # 29789 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_12 - 262 AAA_11 PF13086.1 236 0.00063 12.7 0.3 1 1 1.7e-05 0.0012 11.8 0.3 6 44 89 142 82 260 0.72 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_82 - 503 AAA_11 PF13086.1 236 0.00072 12.5 0.0 1 1 1.3e-05 0.00093 12.1 0.0 2 41 213 253 212 353 0.86 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 2_12 - 262 Sigma54_activ_2 PF14532.1 138 0.00041 13.8 0.1 1 1 7.7e-06 0.0011 12.4 0.0 3 44 79 122 77 151 0.81 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_15 - 287 AAA_32 PF13654.1 509 0.00019 13.5 0.1 1 2 6.6e-06 0.00091 11.3 0.0 8 81 34 112 26 124 0.86 # 13976 # 14836 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 2_15 - 287 AAA_32 PF13654.1 509 0.00019 13.5 0.1 2 2 0.02 2.8 -0.3 0.1 472 502 255 285 242 286 0.89 # 13976 # 14836 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_9 - 228 MethyltransfD12 PF02086.10 260 0.0006 12.6 0.0 1 2 0.015 2.1 1.0 0.0 175 188 18 31 8 92 0.82 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_9 - 228 MethyltransfD12 PF02086.10 260 0.0006 12.6 0.0 2 2 4e-05 0.0056 9.5 0.0 20 46 163 189 148 197 0.78 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 3_4 - 147 tRNA-synt_His PF13393.1 311 0.00025 13.5 1.0 1 1 2.4e-06 0.00034 13.1 1.0 159 246 36 121 30 136 0.87 # 2382 # 2822 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_68 - 383 RNA_helicase PF00910.17 107 7.5e-05 16.3 0.0 1 1 1e-06 0.00014 15.4 0.0 2 33 161 190 160 201 0.82 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 2_20 - 565 AlaDh_PNT_C PF01262.16 168 3.3e-05 16.9 3.1 1 2 0.00051 0.071 6.0 0.8 15 50 92 127 89 130 0.90 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_20 - 565 AlaDh_PNT_C PF01262.16 168 3.3e-05 16.9 3.1 2 2 2.1e-05 0.0029 10.5 0.1 16 58 265 307 257 339 0.84 # 17910 # 19604 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_91 - 192 TIGR00922 TIGR00922 172 0.00026 13.9 0.0 1 1 2.2e-06 0.00031 13.7 0.0 54 104 83 133 42 154 0.87 # 75695 # 76270 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 1_68 - 383 NACHT PF05729.7 166 0.00089 12.3 0.0 1 1 2.8e-05 0.0019 11.2 0.0 4 30 161 187 159 193 0.82 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 2_12 - 262 NACHT PF05729.7 166 0.0017 11.4 2.1 1 2 0.00012 0.0082 9.2 0.3 3 23 102 122 100 148 0.84 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_12 - 262 NACHT PF05729.7 166 0.0017 11.4 2.1 2 2 0.023 1.6 1.7 0.1 80 127 156 200 139 221 0.76 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_68 - 383 AAA_25 PF13481.1 194 1.2e-05 18.2 0.0 1 1 5.6e-07 2e-05 17.4 0.0 21 55 146 179 127 219 0.78 # 56800 # 57948 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.560 2_12 - 262 AAA_25 PF13481.1 194 0.00015 14.6 0.0 1 1 7.2e-06 0.00025 13.8 0.0 29 57 95 123 76 170 0.86 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_9 - 209 AAA_25 PF13481.1 194 0.00016 14.4 0.1 1 1 1.2e-05 0.00043 13.1 0.0 42 87 10 44 3 90 0.78 # 8438 # 9064 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_82 - 503 AAA_25 PF13481.1 194 0.0002 14.2 0.0 1 1 1.5e-05 0.0005 12.8 0.0 19 64 214 260 202 276 0.79 # 66944 # 68452 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.557 1_9 - 228 Methyltransf_15 PF09445.5 164 0.0011 11.8 0.0 1 2 0.042 5.8 -0.2 0.0 53 79 4 29 2 33 0.90 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_9 - 228 Methyltransf_15 PF09445.5 164 0.0011 11.8 0.0 2 2 4.7e-05 0.0065 9.4 0.0 3 31 166 194 164 206 0.87 # 8559 # 9242 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_12 - 262 AAA_28 PF13521.1 163 1.2e-05 18.6 1.1 1 1 4.6e-07 6.4e-05 16.3 0.8 1 24 101 124 101 239 0.90 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_12 - 262 AAA_5 PF07728.9 139 0.00026 14.1 0.2 1 1 4.3e-06 0.0006 12.9 0.2 1 19 101 119 101 243 0.78 # 9963 # 10748 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/f1204606-9b47-4718-8a0c-9de9132a0dc8 # Target file: checkm_output/bins/pm932/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm932/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f1204606-9b47-4718-8a0c-9de9132a0dc8 checkm_output/bins/pm932/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:11:18 2020 # [ok]