# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_12 - 252 Mg_chelatase PF01078.16 207 0.00085 12.3 0.0 1 1 7.5e-06 0.0015 11.6 0.0 22 43 99 120 93 131 0.87 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 5_4 - 188 Methyltransf_12 PF08242.7 99 2.4e-05 18.6 0.0 1 1 2.2e-07 4.3e-05 17.8 0.0 1 99 55 144 55 144 0.86 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 5_4 - 188 RrnaAD PF00398.15 262 2.6e-08 27.0 0.0 1 1 1.7e-10 3.3e-08 26.7 0.0 9 113 29 128 24 148 0.88 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 4_12 - 252 Rad17 PF03215.10 519 0.00021 13.8 0.0 1 1 1.7e-06 0.00033 13.2 0.0 30 66 86 120 78 139 0.80 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_16 - 221 IstB_IS21 PF01695.12 178 5.7e-72 234.7 0.0 1 1 1.1e-73 6.8e-72 234.4 0.0 1 178 17 196 17 196 0.98 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_12 - 252 IstB_IS21 PF01695.12 178 5.9e-60 195.5 0.0 1 1 1.2e-61 8e-60 195.1 0.0 3 178 55 230 53 230 0.99 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 2_3 - 74 IstB_IS21 PF01695.12 178 1.1e-06 22.0 0.1 1 1 2.5e-08 1.6e-06 21.5 0.1 157 177 15 35 6 36 0.91 # 1983 # 2204 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.500 7_4 - 289 MipZ PF09140.6 261 1.4e-09 31.2 0.0 1 2 1.3e-06 0.00026 14.0 0.0 2 39 11 48 10 62 0.92 # 1202 # 2068 # 1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 7_4 - 289 MipZ PF09140.6 261 1.4e-09 31.2 0.0 2 2 5.4e-07 0.0001 15.2 0.0 72 127 106 162 88 165 0.82 # 1202 # 2068 # 1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 5_5 - 174 SSB PF00436.20 104 6.9e-41 132.2 0.2 1 1 4.8e-43 9.2e-41 131.8 0.2 1 101 6 109 6 112 0.96 # 4316 # 4837 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.586 5_4 - 188 Methyltransf_18 PF12847.2 112 5.8e-10 33.6 0.0 1 1 6.1e-12 1.2e-09 32.6 0.0 4 109 53 146 50 148 0.89 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_3 - 945 UvrD_C_2 PF13538.1 104 1.6e-08 28.5 0.1 1 1 3.6e-10 7e-08 26.4 0.1 2 103 523 629 522 630 0.76 # 455 # 3289 # 1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 2_12 - 510 DUF87 PF01935.12 229 0.00056 13.6 0.3 1 2 0.025 4.7 0.7 0.1 121 215 50 147 33 157 0.56 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 2_12 - 510 DUF87 PF01935.12 229 0.00056 13.6 0.3 2 2 2.5e-05 0.0049 10.5 0.0 28 45 249 266 247 277 0.89 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_15 - 209 NB-ARC PF00931.17 287 0.00025 13.8 0.2 1 1 2.6e-06 0.00051 12.8 0.0 8 39 16 47 12 60 0.86 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_12 - 252 AAA_22 PF13401.1 131 7.2e-07 23.3 1.7 1 1 2.9e-07 1.1e-05 19.4 1.5 3 79 98 186 93 203 0.58 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_16 - 221 AAA_22 PF13401.1 131 2.2e-06 21.7 0.0 1 2 8e-05 0.0031 11.5 0.0 5 22 64 81 60 99 0.83 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_16 - 221 AAA_22 PF13401.1 131 2.2e-06 21.7 0.0 2 2 0.0012 0.045 7.7 0.0 88 104 115 143 87 168 0.65 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_15 - 209 AAA_22 PF13401.1 131 6.6e-06 20.1 0.7 1 1 8.8e-07 3.4e-05 17.8 0.7 4 120 27 190 24 201 0.58 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 2_12 - 510 AAA_22 PF13401.1 131 0.00013 15.9 0.1 1 1 1.5e-05 0.00058 13.8 0.0 6 35 246 275 243 328 0.81 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 4_9 - 699 AAA_22 PF13401.1 131 0.00096 13.2 0.7 1 1 8.8e-05 0.0034 11.4 0.7 7 23 512 528 509 677 0.90 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 2_12 - 510 ATP_bind_1 PF03029.12 238 0.00084 12.7 0.1 1 1 1.5e-05 0.0028 11.0 0.0 1 23 249 271 249 276 0.90 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_15 - 209 MutS_V PF00488.16 235 3.2e-06 20.5 0.1 1 1 2.5e-08 4.8e-06 19.9 0.1 27 131 11 120 4 124 0.83 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_8 - 87 Rad60-SLD PF11976.3 72 0.00012 15.6 0.2 1 1 9.1e-07 0.00018 15.1 0.2 12 39 41 68 33 77 0.83 # 5769 # 6029 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.410 4_12 - 252 DNA_pol3_delta2 PF13177.1 162 0.00028 14.4 0.0 1 2 3.9e-05 0.0075 9.8 0.0 20 64 100 144 84 162 0.81 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_12 - 252 DNA_pol3_delta2 PF13177.1 162 0.00028 14.4 0.0 2 2 0.0062 1.2 2.6 0.0 101 138 159 198 150 202 0.75 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 209 AAA_15 PF13175.1 415 7.1e-08 25.7 10.7 1 2 1.9e-05 0.0018 11.1 9.5 12 121 17 120 2 147 0.70 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_15 - 209 AAA_15 PF13175.1 415 7.1e-08 25.7 10.7 2 2 2.5e-06 0.00024 14.0 0.0 365 415 153 199 140 199 0.88 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 6_6 - 164 AAA_15 PF13175.1 415 0.00026 13.9 9.5 1 1 4e-06 0.00039 13.3 9.5 266 388 28 162 2 163 0.68 # 4303 # 4794 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 4_12 - 252 AAA_17 PF13207.1 121 6.8e-07 24.0 0.0 1 1 3.1e-08 1.5e-06 22.9 0.0 3 54 103 158 101 233 0.65 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_9 - 699 AAA_17 PF13207.1 121 7.1e-06 20.7 0.1 1 1 4.7e-07 2.2e-05 19.1 0.1 1 32 511 544 511 665 0.75 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 1_15 - 209 AAA_17 PF13207.1 121 8.3e-05 17.3 2.4 1 1 2.9e-06 0.00014 16.5 2.4 2 19 30 47 29 190 0.87 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 2_12 - 510 AAA_17 PF13207.1 121 0.00045 14.9 0.0 1 1 3.2e-05 0.0015 13.2 0.0 1 21 246 266 246 317 0.78 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_15 - 209 AAA_21 PF13304.1 303 1.9e-17 57.9 2.9 1 1 1.9e-17 1.2e-15 52.0 2.9 1 302 29 199 29 200 0.89 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_9 - 699 AAA_21 PF13304.1 303 2.8e-09 31.1 1.8 1 2 1.5e-07 9.7e-06 19.5 0.4 3 44 513 553 512 590 0.65 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 4_9 - 699 AAA_21 PF13304.1 303 2.8e-09 31.1 1.8 2 2 1.4e-07 9.3e-06 19.6 0.0 237 299 622 678 607 681 0.92 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 6_6 - 164 AAA_21 PF13304.1 303 1.5e-07 25.5 0.9 1 1 2.6e-09 1.7e-07 25.3 0.9 164 276 32 162 2 163 0.61 # 4303 # 4794 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 4_9 - 699 Miro PF08477.8 119 0.0013 13.1 0.1 1 1 3.3e-05 0.0064 10.8 0.0 1 25 511 535 511 571 0.83 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 7_4 - 289 ArsA_ATPase PF02374.10 305 0.0012 11.7 0.1 1 3 0.00016 0.03 7.1 0.0 3 39 12 48 10 61 0.87 # 1202 # 2068 # 1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 7_4 - 289 ArsA_ATPase PF02374.10 305 0.0012 11.7 0.1 2 3 0.0091 1.8 1.3 0.0 124 137 131 144 117 150 0.80 # 1202 # 2068 # 1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 7_4 - 289 ArsA_ATPase PF02374.10 305 0.0012 11.7 0.1 3 3 0.078 15 -1.7 0.0 235 275 153 187 141 210 0.57 # 1202 # 2068 # 1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 4_16 - 221 PhoH PF02562.11 205 2e-07 24.3 0.0 1 1 6.6e-09 6.4e-07 22.6 0.0 11 47 55 91 45 102 0.80 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_12 - 252 PhoH PF02562.11 205 1.2e-05 18.4 0.0 1 1 5.8e-07 5.6e-05 16.3 0.0 16 49 96 129 82 141 0.85 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_16 - 221 AFG1_ATPase PF03969.11 362 0.00011 14.9 0.1 1 1 2.5e-06 0.00049 12.8 0.1 63 216 64 215 8 220 0.72 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 2_12 - 510 T2SE PF00437.15 272 5.2e-48 157.1 0.0 1 1 1.5e-49 7.5e-48 156.6 0.0 5 259 109 376 104 388 0.88 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 4_12 - 252 T2SE PF00437.15 272 6.3e-07 22.3 0.0 1 1 2.1e-08 1e-06 21.7 0.0 103 150 30 121 8 131 0.72 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_9 - 699 T2SE PF00437.15 272 0.00018 14.3 0.0 1 1 7e-06 0.00034 13.4 0.0 112 169 493 549 441 574 0.80 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 1_15 - 209 T2SE PF00437.15 272 0.00062 12.5 0.1 1 1 2.1e-05 0.001 11.8 0.1 121 148 20 47 5 60 0.83 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 2_20 - 148 Ribosomal_S19 PF00203.16 81 0.00039 13.9 0.0 1 2 0.028 5.4 0.6 0.0 33 58 27 52 13 57 0.85 # 15813 # 16256 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.439 2_20 - 148 Ribosomal_S19 PF00203.16 81 0.00039 13.9 0.0 2 2 1.6e-05 0.0031 11.0 0.0 30 61 72 104 65 127 0.85 # 15813 # 16256 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.439 2_12 - 510 Zeta_toxin PF06414.7 201 0.00049 13.1 0.0 1 1 5.1e-06 0.00098 12.1 0.0 18 41 246 269 235 279 0.88 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_15 - 209 SMC_N PF02463.14 220 3.2e-07 23.6 3.5 1 1 3.3e-08 3.2e-06 20.3 3.5 24 204 27 201 17 208 0.68 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_9 - 699 SMC_N PF02463.14 220 1.1e-06 21.9 1.9 1 3 0.061 5.9 -0.2 0.1 44 72 309 336 307 398 0.66 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 4_9 - 699 SMC_N PF02463.14 220 1.1e-06 21.9 1.9 2 3 0.0025 0.24 4.4 0.1 20 44 506 529 499 534 0.79 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 4_9 - 699 SMC_N PF02463.14 220 1.1e-06 21.9 1.9 3 3 2.7e-06 0.00026 14.1 0.0 135 200 603 679 574 688 0.77 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 2_12 - 510 Arch_ATPase PF01637.13 234 4.3e-06 20.4 0.0 1 1 1.3e-07 8.2e-06 19.5 0.0 6 44 231 268 230 298 0.85 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_15 - 209 Arch_ATPase PF01637.13 234 5e-05 16.9 1.5 1 1 3.1e-06 0.0002 14.9 1.5 18 91 25 125 19 187 0.58 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_16 - 221 Arch_ATPase PF01637.13 234 0.0013 12.2 0.1 1 1 8.1e-05 0.0052 10.3 0.0 8 37 51 80 48 101 0.79 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_12 - 252 AAA_16 PF13191.1 185 1.4e-07 25.5 0.8 1 1 4.7e-09 2.3e-07 24.8 0.4 10 111 85 175 76 232 0.73 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 209 AAA_16 PF13191.1 185 1.1e-05 19.3 0.1 1 1 3.6e-07 1.8e-05 18.6 0.1 22 57 25 61 16 162 0.74 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_16 - 221 AAA_16 PF13191.1 185 0.00014 15.7 0.2 1 1 6.6e-06 0.00032 14.5 0.1 21 41 60 80 48 162 0.82 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_9 - 699 AAA_16 PF13191.1 185 0.00068 13.5 0.0 1 1 3.1e-05 0.0015 12.4 0.0 27 42 512 527 504 560 0.91 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 4_9 - 699 AAA_23 PF13476.1 202 2.8e-06 21.6 2.0 1 1 2.7e-07 1e-05 19.8 0.2 13 41 504 531 481 682 0.80 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 1_15 - 209 AAA_23 PF13476.1 202 7.3e-05 17.0 5.6 1 1 4.9e-06 0.00019 15.6 5.6 11 42 18 50 9 184 0.78 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_12 - 252 AAA_23 PF13476.1 202 0.0004 14.6 0.3 1 1 2.5e-05 0.00097 13.3 0.0 23 39 103 119 90 124 0.89 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 23_1 - 81 AAA_23 PF13476.1 202 0.02 9.0 7.3 1 1 0.00061 0.024 8.8 7.3 156 198 10 64 2 67 0.79 # 3 # 245 # 1 # ID=23_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 20_2 - 82 AAA_23 PF13476.1 202 0.045 7.9 8.2 1 1 0.0015 0.057 7.5 8.2 156 198 8 62 2 65 0.79 # 213 # 458 # 1 # ID=20_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 1_15 - 209 AAA_18 PF13238.1 129 5.1e-07 23.9 1.9 1 2 2.5e-07 1.2e-05 19.5 0.7 1 42 30 81 30 123 0.67 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_15 - 209 AAA_18 PF13238.1 129 5.1e-07 23.9 1.9 2 2 0.021 1 3.5 0.0 44 92 160 205 137 208 0.81 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_12 - 252 AAA_18 PF13238.1 129 8.6e-05 16.7 0.0 1 1 3.6e-06 0.00017 15.7 0.0 2 42 103 145 102 206 0.51 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_9 - 699 AAA_18 PF13238.1 129 0.00023 15.3 0.2 1 1 5.2e-05 0.0025 12.0 0.0 1 20 512 531 512 593 0.78 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 2_12 - 510 AAA_18 PF13238.1 129 0.00057 14.0 0.0 1 1 3.6e-05 0.0017 12.5 0.0 2 20 248 266 248 319 0.82 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 7_4 - 289 CbiA PF01656.18 195 4.6e-18 59.1 0.0 1 1 3.1e-20 6.1e-18 58.7 0.0 1 160 12 203 12 229 0.81 # 1202 # 2068 # 1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 5_4 - 188 Methyltransf_25 PF13649.1 101 0.00021 15.5 0.0 1 1 1.6e-06 0.00031 15.0 0.0 1 101 54 142 54 142 0.81 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 2_12 - 510 KaiC PF06745.8 227 8.3e-05 15.6 0.0 1 1 8.3e-07 0.00016 14.7 0.0 21 63 246 289 233 300 0.82 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 4_16 - 221 AAA_14 PF13173.1 128 2.4e-06 21.3 0.0 1 1 8.8e-08 4.2e-06 20.5 0.0 2 95 63 163 62 180 0.68 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_12 - 252 AAA_14 PF13173.1 128 6.5e-06 19.9 0.0 1 1 2.5e-07 1.2e-05 19.1 0.0 2 69 99 168 98 239 0.75 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 209 AAA_14 PF13173.1 128 0.0001 16.0 1.1 1 1 4e-06 0.00019 15.2 1.1 1 40 26 73 26 193 0.68 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_9 - 699 AAA_14 PF13173.1 128 0.0025 11.5 2.8 1 2 0.044 2.1 2.1 0.3 18 56 418 460 416 473 0.66 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 4_9 - 699 AAA_14 PF13173.1 128 0.0025 11.5 2.8 2 2 0.00049 0.023 8.4 0.0 5 29 512 542 509 577 0.69 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 1_15 - 209 AAA_29 PF13555.1 62 1.7e-06 21.4 0.2 1 1 1e-07 3.9e-06 20.2 0.1 17 40 22 44 16 50 0.81 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_9 - 699 AAA_29 PF13555.1 62 2.8e-05 17.5 0.1 1 1 1.6e-06 6.2e-05 16.4 0.1 22 55 509 542 492 545 0.79 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 2_12 - 510 AAA_29 PF13555.1 62 0.00011 15.6 0.1 1 1 1.1e-05 0.00042 13.7 0.0 20 40 242 261 230 268 0.81 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 4_12 - 252 AAA_29 PF13555.1 62 0.00022 14.6 0.0 1 1 1.2e-05 0.00046 13.6 0.0 19 42 98 118 89 122 0.78 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_16 - 221 AAA_29 PF13555.1 62 0.0011 12.3 0.0 1 1 5.6e-05 0.0021 11.4 0.0 19 59 59 100 50 102 0.72 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_16 - 221 AAA PF00004.24 132 3.4e-07 24.4 0.0 1 1 5.7e-09 5.5e-07 23.7 0.0 1 73 66 140 66 169 0.79 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_12 - 252 AAA PF00004.24 132 6.9e-06 20.2 0.0 1 1 1.3e-07 1.3e-05 19.3 0.0 1 99 102 192 102 201 0.71 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_16 - 221 Bac_DnaA PF00308.13 219 1.4e-09 31.7 0.0 1 1 2.1e-11 2e-09 31.2 0.0 37 136 66 163 36 168 0.85 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_12 - 252 Bac_DnaA PF00308.13 219 1.3e-06 22.0 0.0 1 1 2.3e-08 2.2e-06 21.3 0.0 36 136 101 199 86 206 0.89 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_12 - 252 CobU PF02283.11 167 0.0016 11.7 0.0 1 1 2.7e-05 0.0052 10.0 0.0 2 43 103 147 102 151 0.78 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_12 - 252 Sigma54_activat PF00158.21 168 5.3e-06 19.8 0.0 1 1 1.3e-07 1.2e-05 18.7 0.0 17 67 94 144 82 151 0.80 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_16 - 221 Sigma54_activat PF00158.21 168 0.00018 14.8 0.1 1 1 1.2e-05 0.0012 12.2 0.1 18 53 59 94 43 158 0.71 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_15 - 209 MMR_HSR1 PF01926.18 116 0.0015 12.3 3.1 1 1 1.7e-05 0.0034 11.2 3.1 2 19 30 47 29 204 0.90 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 5_4 - 188 N6_Mtase PF02384.11 311 0.0029 10.5 0.0 1 2 0.00016 0.031 7.1 0.0 28 65 32 69 21 83 0.86 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 5_4 - 188 N6_Mtase PF02384.11 311 0.0029 10.5 0.0 2 2 0.018 3.5 0.4 0.0 127 137 114 124 103 134 0.82 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_15 - 209 DUF258 PF03193.11 161 4.5e-07 23.0 0.2 1 1 1.9e-08 7.3e-07 22.3 0.2 24 55 15 47 2 67 0.85 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_16 - 221 DUF258 PF03193.11 161 1.8e-05 17.8 0.0 1 1 6.8e-07 2.6e-05 17.3 0.0 21 78 49 118 31 155 0.72 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_9 - 699 DUF258 PF03193.11 161 0.00053 13.0 0.1 1 1 2.7e-05 0.001 12.1 0.1 24 59 497 533 473 564 0.76 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 4_12 - 252 DUF258 PF03193.11 161 0.00083 12.4 0.0 1 1 3.2e-05 0.0012 11.8 0.0 34 64 98 136 72 188 0.73 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 2_12 - 510 DUF258 PF03193.11 161 0.0019 11.3 0.2 1 1 0.00014 0.0055 9.7 0.0 22 58 229 267 219 323 0.75 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 7_4 - 289 AAA_31 PF13614.1 157 5.1e-06 20.3 0.0 1 1 2.2e-07 4.2e-05 17.4 0.0 1 135 10 151 10 171 0.80 # 1202 # 2068 # 1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 4_16 - 221 NTPase_1 PF03266.10 168 0.00027 14.5 0.1 1 2 0.0031 0.3 4.6 0.1 2 30 66 94 65 100 0.78 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_16 - 221 NTPase_1 PF03266.10 168 0.00027 14.5 0.1 2 2 0.00034 0.033 7.7 0.0 88 113 118 143 105 168 0.71 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_15 - 209 NTPase_1 PF03266.10 168 0.00037 14.1 0.7 1 1 8e-06 0.00077 13.0 0.7 2 18 30 46 29 136 0.88 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 5_4 - 188 Methyltransf_26 PF13659.1 117 6.4e-14 45.9 0.0 1 1 5.8e-16 1.1e-13 45.1 0.0 2 114 52 147 51 150 0.90 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_3 - 945 AAA_30 PF13604.1 196 8.1e-35 114.0 4.1 1 1 1.3e-36 8.1e-35 114.0 4.1 2 184 179 372 178 383 0.83 # 455 # 3289 # 1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 4_12 - 252 AAA_30 PF13604.1 196 0.00022 14.6 0.0 1 1 7e-06 0.00045 13.6 0.0 14 119 95 188 81 198 0.78 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 2_12 - 510 AAA_30 PF13604.1 196 0.0017 11.8 0.0 1 1 4.4e-05 0.0028 11.0 0.0 10 43 236 269 228 281 0.87 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 2_12 - 510 FtsK_SpoIIIE PF01580.13 205 9.6e-05 15.7 0.0 1 1 2.6e-06 0.00016 15.0 0.0 42 59 248 265 229 269 0.91 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 4_12 - 252 FtsK_SpoIIIE PF01580.13 205 0.00021 14.6 0.0 1 1 6.1e-06 0.0004 13.7 0.0 27 65 87 126 74 131 0.78 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 209 FtsK_SpoIIIE PF01580.13 205 0.0006 13.1 0.0 1 1 2.5e-05 0.0016 11.7 0.0 30 56 19 45 10 52 0.90 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 5_4 - 188 MTS PF05175.9 170 1.3e-09 31.5 0.0 1 1 9.2e-12 1.8e-09 31.0 0.0 31 141 50 149 41 166 0.84 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 5_4 - 188 Methyltrans_SAM PF10672.4 286 0.0017 11.0 0.0 1 1 1.3e-05 0.0025 10.5 0.0 196 261 113 173 99 180 0.78 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 5_4 - 188 Met_10 PF02475.11 200 0.00069 13.1 0.0 1 1 4.5e-06 0.00087 12.7 0.0 98 189 47 132 29 145 0.79 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 4_9 - 699 ABC_tran PF00005.22 137 8.8e-30 97.6 0.0 1 1 4.6e-31 1.8e-29 96.6 0.0 1 137 499 650 499 650 0.88 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 1_15 - 209 ABC_tran PF00005.22 137 1.2e-29 97.2 0.1 1 1 4e-31 1.5e-29 96.8 0.1 2 137 18 165 17 165 0.94 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_12 - 252 ABC_tran PF00005.22 137 7.1e-05 17.0 0.0 1 1 5.1e-06 0.0002 15.5 0.0 10 44 98 132 93 237 0.73 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_16 - 221 ABC_tran PF00005.22 137 0.00023 15.3 0.3 1 1 4.8e-05 0.0018 12.4 0.0 8 30 60 82 54 97 0.86 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 2_12 - 510 ABC_tran PF00005.22 137 0.00089 13.4 0.0 1 1 5.6e-05 0.0022 12.2 0.0 13 33 246 266 241 288 0.88 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_15 - 209 TIGR03263 TIGR03263 180 0.00026 14.2 0.3 1 2 1.2e-05 0.0024 11.0 0.1 3 19 29 45 27 54 0.87 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_15 - 209 TIGR03263 TIGR03263 180 0.00026 14.2 0.3 2 2 0.016 3.1 0.9 0.0 149 166 103 120 91 130 0.78 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_16 - 221 RuvB_N PF05496.7 234 0.00052 12.9 0.0 1 1 4.4e-06 0.00086 12.2 0.0 50 119 63 143 53 154 0.66 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_3 - 945 AAA_19 PF13245.1 76 1.4e-07 25.0 0.3 1 1 2.2e-08 8.6e-07 22.5 0.3 8 76 192 257 185 257 0.78 # 455 # 3289 # 1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 4_12 - 252 AAA_19 PF13245.1 76 0.00012 15.6 0.2 1 1 1.7e-05 0.00064 13.3 0.0 10 59 100 143 94 155 0.78 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 209 AAA_19 PF13245.1 76 0.00034 14.2 0.0 1 1 1.9e-05 0.00074 13.1 0.0 9 32 26 48 14 56 0.85 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_16 - 221 AAA_19 PF13245.1 76 0.00058 13.5 0.0 1 1 4e-05 0.0015 12.1 0.0 10 37 64 90 57 119 0.81 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_9 - 699 AAA_19 PF13245.1 76 0.00064 13.3 0.0 1 1 3.7e-05 0.0014 12.2 0.0 12 37 512 535 504 546 0.83 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 2_12 - 510 AAA_10 PF12846.2 304 1.6e-05 18.2 0.0 1 1 6e-07 2.9e-05 17.4 0.0 4 29 247 272 244 297 0.85 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 4_16 - 221 AAA_10 PF12846.2 304 2.2e-05 17.8 0.7 1 2 2.9e-06 0.00014 15.2 0.1 1 33 63 95 63 132 0.88 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_16 - 221 AAA_10 PF12846.2 304 2.2e-05 17.8 0.7 2 2 0.081 3.9 0.6 0.0 202 247 103 153 96 163 0.68 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_15 - 209 AAA_10 PF12846.2 304 0.00033 13.9 0.5 1 1 1.2e-05 0.00059 13.1 0.3 4 29 30 55 27 81 0.78 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_12 - 252 AAA_10 PF12846.2 304 0.0011 12.2 0.0 1 1 3.8e-05 0.0018 11.5 0.0 3 29 101 127 99 173 0.86 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 209 SbcCD_C PF13558.1 90 0.00015 15.5 0.1 1 1 8.2e-06 0.0008 13.2 0.1 30 88 134 179 108 181 0.82 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_9 - 699 SbcCD_C PF13558.1 90 0.0012 12.7 0.0 1 1 8.9e-05 0.0086 9.9 0.0 62 89 638 665 621 666 0.87 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 4_12 - 252 ResIII PF04851.10 184 0.00011 15.9 0.0 1 1 2.3e-06 0.00022 14.9 0.0 11 46 86 120 79 148 0.75 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_16 - 221 ResIII PF04851.10 184 0.00045 13.9 0.0 1 2 0.00012 0.012 9.3 0.0 8 50 50 88 31 96 0.75 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_16 - 221 ResIII PF04851.10 184 0.00045 13.9 0.0 2 2 0.011 1.1 2.9 0.0 112 163 92 142 86 165 0.72 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 5_4 - 188 Methyltransf_31 PF13847.1 152 1.3e-06 21.9 0.0 1 1 8.1e-09 1.6e-06 21.6 0.0 5 119 52 162 48 183 0.83 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 4_12 - 252 Viral_helicase1 PF01443.13 234 0.00088 12.6 0.0 1 1 7e-06 0.0014 12.0 0.0 2 74 103 172 102 184 0.80 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_9 - 699 PduV-EutP PF10662.4 143 0.00029 14.2 0.2 1 1 5.5e-06 0.0011 12.4 0.0 2 26 510 534 509 553 0.82 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 4_12 - 252 DUF815 PF05673.8 250 0.00022 14.0 0.0 1 1 2.1e-06 0.00041 13.1 0.0 53 122 99 175 82 198 0.74 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 2_12 - 510 TrwB_AAD_bind PF10412.4 386 5.8e-05 15.6 0.0 1 1 4.5e-07 8.7e-05 15.0 0.0 19 40 248 269 232 280 0.87 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_3 - 945 AAA_11 PF13086.1 236 0.001 12.4 0.0 1 2 5.4e-06 0.001 12.4 0.0 2 72 179 246 178 262 0.84 # 455 # 3289 # 1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_3 - 945 AAA_11 PF13086.1 236 0.001 12.4 0.0 2 2 0.039 7.6 -0.2 0.7 99 134 814 893 773 930 0.49 # 455 # 3289 # 1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 4_12 - 252 Sigma54_activ_2 PF14532.1 138 1.1e-08 29.0 0.0 1 1 1.1e-10 2.2e-08 28.1 0.0 19 128 97 223 80 231 0.81 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 5_4 - 188 TIGR00755 TIGR00755 256 6.8e-09 28.8 0.0 1 1 4.7e-11 9.1e-09 28.4 0.0 8 105 29 123 25 134 0.90 # 2900 # 3463 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_15 - 209 ArgK PF03308.11 267 0.00028 13.5 0.0 1 1 2.2e-06 0.00043 12.9 0.0 14 50 12 48 3 60 0.86 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_12 - 252 RNA_helicase PF00910.17 107 1.1e-05 19.5 0.0 1 1 2.3e-07 2.2e-05 18.5 0.0 2 74 103 186 102 190 0.81 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 209 RNA_helicase PF00910.17 107 0.0045 11.0 2.5 1 1 9.6e-05 0.0093 10.0 0.2 1 18 30 47 30 86 0.78 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_9 - 699 AAA_24 PF13479.1 213 0.00015 15.2 0.8 1 1 4.1e-06 0.00039 13.8 0.4 5 21 511 527 509 531 0.92 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 4_16 - 221 AAA_24 PF13479.1 213 0.0016 11.8 0.0 1 1 5.7e-05 0.0055 10.1 0.0 3 21 63 81 61 89 0.84 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_9 - 699 NACHT PF05729.7 166 0.00056 13.4 0.1 1 1 1.8e-05 0.0011 12.4 0.1 3 20 512 529 510 533 0.88 # 4430 # 6526 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.319 1_15 - 209 NACHT PF05729.7 166 0.0011 12.5 0.1 1 1 3.4e-05 0.0022 11.5 0.1 2 19 29 46 28 53 0.89 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_16 - 221 NACHT PF05729.7 166 0.0015 12.0 0.2 1 2 0.00011 0.0071 9.8 0.2 3 26 66 89 64 162 0.70 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_16 - 221 NACHT PF05729.7 166 0.0015 12.0 0.2 2 2 0.056 3.6 1.0 0.0 84 127 128 164 85 200 0.71 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_16 - 221 AAA_25 PF13481.1 194 3.8e-05 17.0 0.0 1 1 9e-07 5.8e-05 16.4 0.0 22 58 51 88 32 145 0.79 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_12 - 252 AAA_25 PF13481.1 194 0.00019 14.7 0.1 1 1 1.2e-05 0.00079 12.7 0.1 22 58 88 124 70 197 0.86 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 209 AAA_25 PF13481.1 194 0.00032 14.0 0.0 1 1 1.2e-05 0.00077 12.7 0.0 30 50 24 44 4 52 0.77 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_13 - 401 Methyltransf_15 PF09445.5 164 0.014 8.8 5.2 1 1 0.0026 0.5 3.7 4.8 44 130 53 246 19 372 0.53 # 10776 # 11978 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 6_13 - 143 TIGR00967 TIGR00967 414 0.00019 13.9 3.4 1 1 1.2e-06 0.00023 13.6 3.4 256 320 38 104 29 114 0.84 # 8963 # 9391 # -1 # ID=6_13;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.329 20_2 - 82 ABC_tran_2 PF12848.2 85 0.015 9.0 8.3 1 2 0.0028 0.27 5.0 1.4 24 54 10 40 4 43 0.87 # 213 # 458 # 1 # ID=20_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 20_2 - 82 ABC_tran_2 PF12848.2 85 0.015 9.0 8.3 2 2 0.00029 0.028 8.2 2.9 26 52 37 63 34 79 0.84 # 213 # 458 # 1 # ID=20_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 23_1 - 81 ABC_tran_2 PF12848.2 85 0.016 9.0 8.3 1 2 0.0027 0.26 5.1 1.5 24 54 12 42 5 45 0.86 # 3 # 245 # 1 # ID=23_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 23_1 - 81 ABC_tran_2 PF12848.2 85 0.016 9.0 8.3 2 2 0.00029 0.028 8.2 2.8 26 52 39 65 36 79 0.85 # 3 # 245 # 1 # ID=23_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 4_12 - 252 AAA_28 PF13521.1 163 0.00022 15.0 0.0 1 1 5.9e-06 0.00038 14.3 0.0 3 73 103 180 101 187 0.60 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 209 AAA_28 PF13521.1 163 0.00046 14.0 0.1 1 1 1.5e-05 0.00093 13.0 0.1 2 18 30 46 29 60 0.85 # 12701 # 13327 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 4_16 - 221 AAA_28 PF13521.1 163 0.00076 13.3 0.2 1 1 4.9e-05 0.0032 11.3 0.2 1 44 65 113 65 196 0.84 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 2_12 - 510 Herpes_Helicase PF02689.9 819 0.00035 12.2 0.0 1 1 2.9e-06 0.00055 11.5 0.0 57 83 241 267 222 270 0.79 # 7862 # 9391 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 4_12 - 252 AAA_5 PF07728.9 139 2.8e-05 17.7 0.1 1 1 8.4e-07 8.1e-05 16.2 0.1 1 93 101 190 101 199 0.75 # 8873 # 9628 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 4_16 - 221 AAA_5 PF07728.9 139 3.6e-05 17.3 0.3 1 2 4.6e-06 0.00044 13.8 0.2 1 74 65 134 65 155 0.76 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 4_16 - 221 AAA_5 PF07728.9 139 3.6e-05 17.3 0.3 2 2 0.08 7.8 0.1 0.0 89 123 185 219 178 220 0.64 # 13501 # 14163 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/f49270ee-1c98-416f-a837-d4be92efe395 # Target file: checkm_output/bins/pm86/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm86/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f49270ee-1c98-416f-a837-d4be92efe395 checkm_output/bins/pm86/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:10:31 2020 # [ok]