# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_92 - 228 UPF0020 PF01170.13 180 1.8e-05 17.3 0.0 1 2 0.00039 0.041 6.4 0.0 104 123 18 37 5 89 0.71 # 74986 # 75669 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 1_92 - 228 UPF0020 PF01170.13 180 1.8e-05 17.3 0.0 2 2 6.2e-05 0.0064 9.0 0.0 28 54 163 189 158 221 0.67 # 74986 # 75669 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 1_98 - 209 MipZ PF09140.6 261 1.9e-21 69.2 0.5 1 2 1.2e-12 1.2e-10 33.8 0.0 2 53 2 52 1 60 0.89 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_98 - 209 MipZ PF09140.6 261 1.9e-21 69.2 0.5 2 2 1.6e-12 1.6e-10 33.4 0.0 87 140 65 118 58 128 0.92 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_98 - 209 YhjQ PF06564.7 244 2.4e-05 16.7 0.3 1 2 1.8e-06 0.00019 13.8 0.3 4 38 3 37 1 50 0.89 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_98 - 209 YhjQ PF06564.7 244 2.4e-05 16.7 0.3 2 2 0.029 3 0.0 0.0 108 144 69 103 44 113 0.78 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_84 - 176 SSB PF00436.20 104 6.3e-41 131.5 0.3 1 1 7.9e-43 8.2e-41 131.1 0.3 1 101 6 109 6 112 0.96 # 70722 # 71249 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.597 1_29 - 383 DUF87 PF01935.12 229 3.7e-05 16.6 0.0 1 1 1.3e-06 6.7e-05 15.7 0.0 28 51 162 186 161 192 0.83 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_66 - 767 DUF87 PF01935.12 229 0.00097 11.9 0.1 1 2 0.00046 0.024 7.4 0.0 16 40 130 153 120 168 0.80 # 54974 # 57274 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_66 - 767 DUF87 PF01935.12 229 0.00097 11.9 0.1 2 2 0.022 1.2 1.8 0.1 112 174 641 702 619 734 0.67 # 54974 # 57274 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_29 - 383 NB-ARC PF00931.17 287 0.00056 11.7 0.0 1 1 1.1e-05 0.0011 10.8 0.0 18 49 156 185 145 193 0.79 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_13 - 503 AAA_22 PF13401.1 131 6.1e-06 19.4 0.0 1 1 2.3e-07 1.2e-05 18.4 0.0 4 49 229 281 226 349 0.82 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_29 - 383 AAA_22 PF13401.1 131 8.3e-06 18.9 0.0 1 1 3.1e-07 1.6e-05 18.0 0.0 3 44 156 194 153 233 0.76 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_98 - 209 SRP54 PF00448.17 196 2.5e-07 23.2 0.1 1 1 1.5e-08 1.6e-06 20.7 0.1 4 98 2 91 1 134 0.80 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_92 - 228 N6_N4_Mtase PF01555.13 231 7.9e-37 119.9 0.0 1 1 3.4e-36 3.5e-34 111.2 0.0 1 228 21 200 21 203 0.89 # 74986 # 75669 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 1_98 - 209 AAA_17 PF13207.1 121 1.6e-05 18.7 0.0 1 1 1.2e-06 4.3e-05 17.3 0.0 9 77 11 84 9 205 0.75 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_29 - 383 AAA_17 PF13207.1 121 0.00012 15.9 0.0 1 1 8.3e-06 0.00029 14.7 0.0 3 39 161 200 161 251 0.72 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_13 - 503 AAA_17 PF13207.1 121 0.00015 15.5 0.2 1 1 1.3e-05 0.00046 14.0 0.1 1 32 231 264 231 353 0.79 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_98 - 209 MobB PF03205.9 140 5.9e-05 15.8 0.1 1 1 1.6e-06 0.00017 14.3 0.0 10 42 11 41 1 46 0.79 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_98 - 209 ArsA_ATPase PF02374.10 305 4.5e-08 25.4 0.9 1 3 1.2e-09 1.2e-07 24.0 0.1 3 48 3 48 1 69 0.85 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_98 - 209 ArsA_ATPase PF02374.10 305 4.5e-08 25.4 0.9 2 3 0.053 5.6 -1.2 0.0 121 135 69 85 47 86 0.75 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_98 - 209 ArsA_ATPase PF02374.10 305 4.5e-08 25.4 0.9 3 3 0.075 7.8 -1.7 0.0 205 234 132 161 118 202 0.65 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_29 - 383 PhoH PF02562.11 205 0.00013 14.2 0.0 1 1 2.3e-06 0.00024 13.3 0.0 15 60 153 198 141 230 0.86 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_13 - 503 T2SE PF00437.15 272 1.9e-37 121.6 0.0 1 1 6.2e-39 3.2e-37 120.8 0.0 66 269 161 378 142 380 0.86 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_29 - 383 T2SE PF00437.15 272 3.5e-35 114.1 0.0 1 1 1e-36 5.2e-35 113.6 0.0 109 261 142 292 23 309 0.78 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_98 - 209 VirC1 PF07015.6 231 3.5e-09 29.0 0.0 1 1 7.1e-11 7.4e-09 27.9 0.0 3 172 2 164 1 206 0.74 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_98 - 209 Fer4_NifH PF00142.13 273 7.7e-05 14.9 0.2 1 1 2.3e-06 0.00024 13.3 0.0 8 38 9 39 2 46 0.89 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_29 - 383 AAA_16 PF13191.1 185 9.4e-06 18.7 0.1 1 1 7e-07 3.6e-05 16.7 0.0 25 57 158 193 148 326 0.80 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_13 - 503 AAA_16 PF13191.1 185 0.00013 15.0 0.0 1 1 5.1e-06 0.00026 13.9 0.0 21 51 226 256 215 338 0.85 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_29 - 383 AAA_23 PF13476.1 202 2.8e-05 17.5 0.1 1 1 1.1e-06 5.9e-05 16.4 0.0 20 40 158 178 144 205 0.85 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_13 - 503 AAA_23 PF13476.1 202 0.00037 13.8 0.1 1 1 1.3e-05 0.00068 12.9 0.1 20 37 230 247 218 264 0.90 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_29 - 383 AAA_18 PF13238.1 129 6.8e-06 19.4 0.0 1 1 2.3e-07 1.2e-05 18.6 0.0 2 42 161 197 161 242 0.78 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_13 - 503 AAA_18 PF13238.1 129 0.00075 12.8 0.4 1 1 3.4e-05 0.0018 11.6 0.2 1 18 232 249 232 267 0.87 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_98 - 209 CbiA PF01656.18 195 1.8e-22 72.6 0.0 1 1 3.1e-24 3.2e-22 71.8 0.0 1 158 3 141 3 179 0.75 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_29 - 383 AAA_29 PF13555.1 62 2.2e-05 16.9 0.0 1 1 1.1e-06 5.6e-05 15.6 0.0 25 43 159 177 149 185 0.84 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_13 - 503 AAA_29 PF13555.1 62 2.9e-05 16.6 0.0 1 1 1.3e-06 7e-05 15.3 0.0 20 40 227 246 218 260 0.84 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_29 - 383 Sigma54_activat PF00158.21 168 0.00067 12.1 0.0 1 1 1.2e-05 0.0012 11.2 0.0 26 46 161 181 145 194 0.82 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_66 - 767 TraG-D_C PF12696.2 128 2.1e-08 27.1 4.1 1 2 2.2e-10 2.3e-08 27.0 0.2 1 86 437 522 437 558 0.83 # 54974 # 57274 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_66 - 767 TraG-D_C PF12696.2 128 2.1e-08 27.1 4.1 2 2 0.064 6.6 -0.4 0.0 71 95 622 645 614 670 0.60 # 54974 # 57274 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_98 - 209 AAA_31 PF13614.1 157 4.5e-06 19.6 0.0 1 2 2.5e-07 2.6e-05 17.1 0.0 2 42 2 42 1 55 0.88 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_98 - 209 AAA_31 PF13614.1 157 4.5e-06 19.6 0.0 2 2 0.055 5.7 -0.2 0.0 109 127 68 86 62 113 0.68 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_29 - 383 AAA_33 PF13671.1 143 0.00051 12.9 0.1 1 1 1.8e-05 0.0018 11.1 0.0 3 21 161 179 159 194 0.90 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 228 Methyltransf_26 PF13659.1 117 1.8e-11 37.1 0.0 1 2 4.2e-07 4.4e-05 16.5 0.0 57 114 7 71 2 74 0.72 # 74986 # 75669 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 1_92 - 228 Methyltransf_26 PF13659.1 117 1.8e-11 37.1 0.0 2 2 9.7e-08 1e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 74986 # 75669 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 1_13 - 503 AAA_30 PF13604.1 196 2.7e-07 23.3 0.0 1 1 4.9e-09 5.1e-07 22.4 0.0 2 45 213 256 212 263 0.91 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_29 - 383 FtsK_SpoIIIE PF01580.13 205 0.00064 12.2 0.0 1 1 1e-05 0.0011 11.4 0.0 40 63 159 182 122 227 0.87 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_29 - 383 ABC_tran PF00005.22 137 2.5e-05 17.6 0.1 1 1 1.3e-06 6.7e-05 16.2 0.0 15 34 161 180 150 197 0.87 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_13 - 503 ABC_tran PF00005.22 137 0.00051 13.3 0.0 1 1 1.7e-05 0.0009 12.5 0.0 13 37 231 255 226 364 0.91 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_92 - 228 Cons_hypoth95 PF03602.10 183 2.2e-05 16.9 0.0 1 2 0.00065 0.068 5.5 0.0 114 146 20 54 10 82 0.65 # 74986 # 75669 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 1_92 - 228 Cons_hypoth95 PF03602.10 183 2.2e-05 16.9 0.0 2 2 4e-05 0.0042 9.4 0.0 41 62 162 183 145 218 0.78 # 74986 # 75669 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 1_13 - 503 AAA_19 PF13245.1 76 9.6e-05 15.1 0.7 1 1 4.3e-06 0.00022 13.9 0.1 5 36 223 255 219 272 0.71 # 9309 # 10817 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.567 1_98 - 209 AAA_19 PF13245.1 76 0.0003 13.5 0.1 1 2 0.00019 0.01 8.6 0.0 20 48 11 35 9 44 0.84 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_98 - 209 AAA_19 PF13245.1 76 0.0003 13.5 0.1 2 2 0.021 1.1 2.1 0.0 42 63 135 158 118 184 0.76 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_49 - 1015 AAA_10 PF12846.2 304 1.9e-31 102.5 0.0 1 1 1.4e-32 3.7e-31 101.6 0.0 8 303 502 898 498 899 0.89 # 39490 # 42534 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.567 1_66 - 767 AAA_10 PF12846.2 304 1.3e-06 21.0 0.1 1 1 1.1e-07 2.7e-06 19.9 0.1 2 292 137 506 136 516 0.72 # 54974 # 57274 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_29 - 383 AAA_10 PF12846.2 304 5.4e-06 18.9 0.0 1 2 3.8e-06 9.8e-05 14.8 0.0 3 27 159 183 157 197 0.87 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_29 - 383 AAA_10 PF12846.2 304 5.4e-06 18.9 0.0 2 2 0.036 0.95 1.7 0.0 193 248 290 348 259 352 0.76 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_98 - 209 AAA_10 PF12846.2 304 0.00016 14.1 0.0 1 1 1e-05 0.00026 13.4 0.0 11 39 11 39 3 66 0.90 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_70 - 283 Methyltransf_27 PF13708.1 194 6e-67 217.9 0.0 1 1 8e-69 8.3e-67 217.4 0.0 2 194 85 278 84 278 0.96 # 61213 # 62061 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_66 - 767 TrwB_AAD_bind PF10412.4 386 5.9e-06 18.0 0.2 1 2 0.00041 0.043 5.3 0.0 11 32 132 153 126 164 0.80 # 54974 # 57274 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_66 - 767 TrwB_AAD_bind PF10412.4 386 5.9e-06 18.0 0.2 2 2 1.4e-05 0.0015 10.1 0.1 260 332 452 525 425 578 0.76 # 54974 # 57274 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_92 - 228 MethyltransfD12 PF02086.10 260 0.00032 13.1 0.0 1 2 0.011 1.1 1.5 0.0 174 188 17 31 8 90 0.84 # 74986 # 75669 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 1_92 - 228 MethyltransfD12 PF02086.10 260 0.00032 13.1 0.0 2 2 4e-05 0.0042 9.5 0.0 20 46 163 189 148 197 0.78 # 74986 # 75669 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 1_29 - 383 RNA_helicase PF00910.17 107 4.2e-05 16.7 0.0 1 1 8.3e-07 8.6e-05 15.7 0.0 2 28 161 187 160 202 0.83 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_1 - 216 TIGR00922 TIGR00922 172 0.00029 13.3 0.0 1 1 3.4e-06 0.00035 13.1 0.0 54 104 107 157 58 178 0.87 # 2 # 649 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.539 1_29 - 383 NACHT PF05729.7 166 0.001 11.7 0.0 1 1 1.8e-05 0.0019 10.8 0.0 4 27 161 184 159 193 0.84 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_29 - 383 AAA_25 PF13481.1 194 5.1e-07 22.2 0.0 1 1 1.6e-08 8.1e-07 21.6 0.0 21 73 146 196 127 236 0.80 # 22744 # 23892 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_98 - 209 AAA_25 PF13481.1 194 0.00012 14.4 0.1 1 1 6.2e-06 0.00032 13.1 0.0 42 87 10 44 3 90 0.78 # 79819 # 80445 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4134ece9-1809-469a-a99f-f10a88ed282f # Target file: checkm_output/bins/pm850/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm850/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4134ece9-1809-469a-a99f-f10a88ed282f checkm_output/bins/pm850/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:10:24 2020 # [ok]