# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_9 - 258 Eno-Rase_NADH_b PF12242.3 78 0.00016 15.4 0.1 1 1 3e-06 0.00061 13.5 0.2 37 65 6 32 1 44 0.77 # 7736 # 8509 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_23 - 228 UPF0020 PF01170.13 180 0.0001 15.8 0.0 1 2 0.00042 0.086 6.3 0.0 103 117 17 31 4 86 0.79 # 14882 # 15565 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_23 - 228 UPF0020 PF01170.13 180 0.0001 15.8 0.0 2 2 0.00016 0.033 7.6 0.0 28 54 163 189 158 220 0.72 # 14882 # 15565 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_36 - 341 cobW PF02492.14 178 0.0017 11.8 0.0 1 1 1.4e-05 0.0028 11.0 0.0 4 30 5 31 3 53 0.72 # 25952 # 26974 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_12 - 119 RrnaAD PF00398.15 262 1.5e-05 18.0 0.0 1 1 9.1e-08 1.9e-05 17.7 0.0 9 73 29 95 23 104 0.92 # 8822 # 9178 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 13_1 - 260 IstB_IS21 PF01695.12 178 9.3e-73 237.3 0.1 1 2 0.049 10 -0.6 0.0 64 97 25 57 24 61 0.64 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 IstB_IS21 PF01695.12 178 9.3e-73 237.3 0.1 2 2 9.8e-75 2e-72 236.2 0.1 1 178 56 235 56 235 0.98 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_26 - 389 MipZ PF09140.6 261 8.8e-06 18.8 0.4 1 2 3.5e-06 0.00072 12.6 0.0 2 47 108 153 107 157 0.87 # 18561 # 19727 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 389 MipZ PF09140.6 261 8.8e-06 18.8 0.4 2 2 0.0011 0.23 4.4 0.0 88 134 224 270 197 292 0.84 # 18561 # 19727 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_9 - 258 3HCDH_N PF02737.13 180 0.0012 12.4 1.1 1 2 1.6e-05 0.0032 11.0 0.5 6 70 15 80 9 94 0.78 # 7736 # 8509 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 4_9 - 258 3HCDH_N PF02737.13 180 0.0012 12.4 1.1 2 2 0.055 11 -0.5 0.0 12 30 169 187 162 231 0.71 # 7736 # 8509 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_8 - 151 SSB PF00436.20 104 2.1e-27 89.0 0.6 1 1 1.3e-29 2.6e-27 88.7 0.6 26 101 2 80 1 83 0.93 # 4533 # 4985 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.605 1_12 - 119 Methyltransf_18 PF12847.2 112 0.00019 15.9 0.0 1 1 2.4e-06 0.0005 14.6 0.0 5 46 54 95 50 113 0.87 # 8822 # 9178 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 2_4 - 1707 UvrD_C_2 PF13538.1 104 2.9e-07 24.6 0.7 1 2 0.025 2.5 2.2 0.0 6 44 1227 1265 1223 1295 0.74 # 2246 # 7366 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_4 - 1707 UvrD_C_2 PF13538.1 104 2.9e-07 24.6 0.7 2 2 1e-07 1e-05 19.6 0.2 3 102 1341 1444 1339 1446 0.77 # 2246 # 7366 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_36 - 341 UvrD_C_2 PF13538.1 104 0.00016 15.8 0.0 1 1 3e-06 0.00031 14.8 0.0 37 103 247 329 224 330 0.65 # 25952 # 26974 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_23 - 876 DUF87 PF01935.12 229 2.3e-07 24.7 0.0 1 1 3.3e-09 6.7e-07 23.2 0.0 26 222 482 669 468 676 0.77 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 13_1 - 260 AAA_22 PF13401.1 131 3.2e-06 21.3 0.2 1 2 4.5e-05 0.0045 11.0 0.0 5 21 103 119 99 131 0.83 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 AAA_22 PF13401.1 131 3.2e-06 21.3 0.2 2 2 0.00073 0.074 7.1 0.0 88 103 154 181 126 203 0.66 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_36 - 341 AAA_22 PF13401.1 131 6.8e-05 16.9 0.0 1 1 4.7e-06 0.00048 14.2 0.0 8 111 5 155 4 167 0.75 # 25952 # 26974 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_35 - 522 AAA_15 PF13175.1 415 6.9e-17 55.4 0.1 1 2 3.4e-09 3.5e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_35 - 522 AAA_15 PF13175.1 415 6.9e-17 55.4 0.1 2 2 3.3e-11 3.4e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_2 - 276 AAA_15 PF13175.1 415 4.1e-07 23.2 0.0 1 2 3e-05 0.003 10.5 0.0 23 42 34 53 19 86 0.82 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_2 - 276 AAA_15 PF13175.1 415 4.1e-07 23.2 0.0 2 2 2.4e-05 0.0025 10.8 0.0 370 410 160 200 151 202 0.91 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_23 - 228 N6_N4_Mtase PF01555.13 231 6.2e-37 121.2 0.0 1 2 5.1e-16 1e-13 45.2 0.0 1 114 21 124 21 133 0.91 # 14882 # 15565 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_23 - 228 N6_N4_Mtase PF01555.13 231 6.2e-37 121.2 0.0 2 2 6.4e-25 1.3e-22 74.3 0.0 169 228 141 200 126 203 0.90 # 14882 # 15565 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_5 - 736 AAA_17 PF13207.1 121 0.00069 14.4 0.0 1 1 8.1e-06 0.0017 13.1 0.0 3 28 189 218 187 336 0.74 # 7366 # 9573 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 3_2 - 276 AAA_21 PF13304.1 303 1.5e-17 58.4 0.0 1 2 2.6e-09 2.6e-07 24.7 0.0 1 25 35 63 35 100 0.77 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_2 - 276 AAA_21 PF13304.1 303 1.5e-17 58.4 0.0 2 2 1.7e-11 1.7e-09 31.9 0.0 232 298 138 201 107 203 0.84 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_35 - 522 AAA_21 PF13304.1 303 1.3e-13 45.5 0.1 1 2 1.4e-06 0.00014 15.7 0.0 2 24 27 49 27 76 0.83 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_35 - 522 AAA_21 PF13304.1 303 1.3e-13 45.5 0.1 2 2 4.1e-10 4.2e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_23 - 876 MobB PF03205.9 140 0.00052 13.7 0.2 1 2 5.4e-05 0.0055 10.3 0.0 4 37 483 515 481 523 0.79 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_23 - 876 MobB PF03205.9 140 0.00052 13.7 0.2 2 2 0.069 7 0.3 0.0 25 64 695 732 690 744 0.86 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_5 - 736 MobB PF03205.9 140 0.0017 12.0 0.0 1 1 3.6e-05 0.0036 10.9 0.0 7 34 192 219 188 225 0.89 # 7366 # 9573 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 8_7 - 122 CTP_transf_2 PF01467.21 157 0.0016 12.4 0.0 1 1 8.5e-06 0.0017 12.3 0.0 32 67 7 41 2 98 0.65 # 4233 # 4598 # 1 # ID=8_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_26 - 389 ArsA_ATPase PF02374.10 305 3.6e-06 20.1 0.4 1 2 1.7e-06 0.00034 13.6 0.1 9 36 115 142 109 151 0.89 # 18561 # 19727 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 389 ArsA_ATPase PF02374.10 305 3.6e-06 20.1 0.4 2 2 0.0011 0.23 4.3 0.0 123 136 231 244 221 251 0.84 # 18561 # 19727 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 13_1 - 260 PhoH PF02562.11 205 2.1e-07 24.2 0.1 1 1 3.6e-09 7.2e-07 22.5 0.0 11 48 94 131 83 159 0.83 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 AFG1_ATPase PF03969.11 362 0.00015 14.6 0.2 1 1 2.8e-06 0.00057 12.6 0.2 63 216 103 254 43 259 0.72 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_35 - 522 SMC_N PF02463.14 220 5.1e-11 36.1 0.0 1 2 2.8e-11 2.9e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_35 - 522 SMC_N PF02463.14 220 5.1e-11 36.1 0.0 2 2 0.0047 0.48 3.5 0.0 163 204 281 321 253 330 0.85 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_2 - 276 SMC_N PF02463.14 220 4.6e-08 26.4 0.2 1 1 1.1e-09 1.2e-07 25.1 0.2 25 198 34 201 22 218 0.75 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_26 - 389 VirC1 PF07015.6 231 0.00013 14.9 0.1 1 2 0.00028 0.057 6.3 0.0 4 42 109 147 107 154 0.91 # 18561 # 19727 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 389 VirC1 PF07015.6 231 0.00013 14.9 0.1 2 2 0.0003 0.061 6.2 0.1 84 139 235 290 222 312 0.77 # 18561 # 19727 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 13_1 - 260 Arch_ATPase PF01637.13 234 0.0019 11.8 0.1 1 2 3.4e-05 0.007 9.9 0.0 8 37 90 119 87 140 0.79 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 Arch_ATPase PF01637.13 234 0.0019 11.8 0.1 2 2 0.071 14 -0.9 0.0 121 150 167 192 144 203 0.68 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_5 - 736 AAA_16 PF13191.1 185 7.4e-06 19.9 0.0 1 1 6.6e-07 4.5e-05 17.4 0.0 21 60 182 222 179 263 0.81 # 7366 # 9573 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 13_1 - 260 AAA_16 PF13191.1 185 0.00013 15.9 1.1 1 1 8.9e-06 0.00061 13.7 0.1 21 41 99 119 86 151 0.78 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_2 - 276 AAA_16 PF13191.1 185 0.00045 14.1 0.2 1 1 1.6e-05 0.0011 12.9 0.0 12 63 23 74 16 92 0.72 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_35 - 522 AAA_23 PF13476.1 202 6.7e-12 40.0 0.0 1 1 3.2e-13 3.3e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_2 - 276 AAA_23 PF13476.1 202 2.2e-05 18.7 0.2 1 1 3.8e-07 3.9e-05 17.9 0.2 21 40 35 54 22 64 0.86 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_9 - 258 adh_short PF00106.20 167 1e-23 77.9 1.3 1 1 7.3e-26 1.5e-23 77.4 1.3 3 166 10 175 8 176 0.89 # 7736 # 8509 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 3_2 - 276 AAA_13 PF13166.1 712 0.0024 10.2 0.1 1 2 0.00076 0.16 4.2 0.2 23 36 40 53 29 66 0.83 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_2 - 276 AAA_13 PF13166.1 712 0.0024 10.2 0.1 2 2 0.001 0.21 3.8 0.0 529 572 162 203 152 210 0.90 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_26 - 389 CbiA PF01656.18 195 2e-36 119.1 0.0 1 1 1.3e-38 2.7e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 18561 # 19727 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 13_1 - 260 AAA_14 PF13173.1 128 2.4e-06 21.4 0.0 1 1 2.3e-08 4.6e-06 20.5 0.0 2 96 102 203 101 221 0.67 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_35 - 522 AAA_29 PF13555.1 62 1.9e-07 24.5 0.0 1 1 5.6e-09 3.8e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_2 - 276 AAA_29 PF13555.1 62 1.5e-06 21.6 0.2 1 1 5.1e-08 3.5e-06 20.4 0.2 18 44 29 54 14 63 0.83 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 13_1 - 260 AAA_29 PF13555.1 62 0.0015 12.0 0.0 1 1 4.3e-05 0.0029 11.1 0.0 19 59 98 139 89 141 0.72 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 AAA PF00004.24 132 3.8e-07 24.3 0.0 1 1 3.2e-09 6.5e-07 23.5 0.0 1 74 105 180 105 214 0.77 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 Bac_DnaA PF00308.13 219 2.2e-09 31.2 0.0 1 1 1.6e-11 3.2e-09 30.6 0.0 37 136 105 202 75 207 0.85 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 4_9 - 258 KR PF08659.5 181 3.7e-11 36.9 1.9 1 1 3.8e-13 7.7e-11 35.9 1.9 4 162 11 170 9 190 0.79 # 7736 # 8509 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 13_1 - 260 Sigma54_activat PF00158.21 168 0.00028 14.3 0.1 1 1 8.2e-06 0.0017 11.8 0.1 18 53 98 133 82 198 0.72 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_12 - 426 Pyr_redox_3 PF13738.1 203 4.5e-18 59.9 0.0 1 2 2e-16 4e-14 47.0 0.0 78 200 93 218 64 221 0.87 # 11620 # 12897 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_12 - 426 Pyr_redox_3 PF13738.1 203 4.5e-18 59.9 0.0 2 2 2.2e-05 0.0045 10.9 0.0 48 172 234 375 225 381 0.65 # 11620 # 12897 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_2 - 276 MMR_HSR1 PF01926.18 116 0.00076 13.4 0.5 1 1 6.4e-06 0.0013 12.6 0.5 2 21 36 55 35 200 0.75 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 13_1 - 260 DUF258 PF03193.11 161 2.6e-05 17.3 0.0 1 1 3.9e-07 4e-05 16.8 0.0 21 78 88 157 70 192 0.71 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_2 - 276 DUF258 PF03193.11 161 0.00049 13.2 0.1 1 1 8.7e-06 0.00088 12.4 0.1 25 67 22 65 2 71 0.79 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_5 - 736 TraG-D_C PF12696.2 128 1.5e-20 67.3 0.0 1 1 1.4e-22 2.8e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 7366 # 9573 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 7_4 - 754 TruB_N PF01509.13 149 0.00064 13.8 0.0 1 1 6.4e-06 0.0013 12.8 0.0 20 103 10 99 7 114 0.81 # 2192 # 4453 # -1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 1_26 - 389 AAA_31 PF13614.1 157 2e-09 31.5 0.0 1 2 1.4e-08 2.8e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 18561 # 19727 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 389 AAA_31 PF13614.1 157 2e-09 31.5 0.0 2 2 0.00018 0.037 7.9 0.1 110 152 227 268 223 272 0.84 # 18561 # 19727 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 13_1 - 260 NTPase_1 PF03266.10 168 0.00047 13.8 0.1 1 2 0.0016 0.33 4.5 0.1 2 30 105 133 104 153 0.83 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 NTPase_1 PF03266.10 168 0.00047 13.8 0.1 2 2 0.00025 0.05 7.2 0.0 88 112 157 181 144 204 0.72 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_2 - 276 AAA_33 PF13671.1 143 1.6e-05 18.7 0.1 1 1 3.4e-07 6.9e-05 16.7 0.1 3 33 37 82 35 203 0.61 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_23 - 228 Methyltransf_26 PF13659.1 117 4.5e-11 36.8 0.1 1 2 1e-06 7.1e-05 16.8 0.0 57 114 7 71 2 74 0.72 # 14882 # 15565 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_23 - 228 Methyltransf_26 PF13659.1 117 4.5e-11 36.8 0.1 2 2 4.3e-07 3e-05 18.0 0.0 4 44 167 206 164 222 0.82 # 14882 # 15565 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_11 - 84 Methyltransf_26 PF13659.1 117 2.1e-05 18.5 0.1 1 1 4.7e-07 3.2e-05 17.9 0.1 71 114 9 43 3 46 0.83 # 8613 # 8864 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 1_12 - 119 Methyltransf_26 PF13659.1 117 0.00018 15.5 0.1 1 1 4.9e-06 0.00033 14.6 0.0 4 44 54 95 51 114 0.89 # 8822 # 9178 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 2_4 - 1707 AAA_30 PF13604.1 196 3.2e-42 138.2 22.3 1 2 1.4e-05 0.00092 12.7 3.7 7 132 420 539 416 559 0.83 # 2246 # 7366 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_4 - 1707 AAA_30 PF13604.1 196 3.2e-42 138.2 22.3 2 2 7.4e-44 5e-42 137.6 1.6 1 186 968 1156 968 1160 0.94 # 2246 # 7366 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 3_2 - 276 AAA_30 PF13604.1 196 0.0013 12.3 0.3 1 1 4.4e-05 0.003 11.0 0.1 15 53 30 68 21 83 0.74 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_5 - 736 AAA_30 PF13604.1 196 0.0017 11.8 0.0 1 1 5.5e-05 0.0037 10.7 0.0 21 57 188 224 180 230 0.85 # 7366 # 9573 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 2_23 - 876 FtsK_SpoIIIE PF01580.13 205 8.5e-06 19.3 0.2 1 2 2e-06 0.00041 13.7 0.0 39 63 476 504 463 507 0.84 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_23 - 876 FtsK_SpoIIIE PF01580.13 205 8.5e-06 19.3 0.2 2 2 0.0038 0.78 3.0 0.1 75 167 530 626 529 632 0.85 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 9_3 - 304 TIGR02075 TIGR02075 233 0.00088 12.5 0.1 1 2 0.013 2.7 1.1 0.0 5 90 8 98 4 128 0.67 # 2812 # 3723 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 9_3 - 304 TIGR02075 TIGR02075 233 0.00088 12.5 0.1 2 2 0.0001 0.02 8.0 0.1 135 166 206 236 158 252 0.70 # 2812 # 3723 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 1_11 - 84 MTS PF05175.9 170 9.7e-05 15.7 0.0 1 1 5.3e-07 0.00011 15.5 0.0 98 142 8 46 2 65 0.81 # 8613 # 8864 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 1_35 - 522 DUF2813 PF11398.3 373 6.6e-05 16.0 1.2 1 2 4.6e-06 0.00095 12.2 0.0 11 49 12 51 3 56 0.79 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_35 - 522 DUF2813 PF11398.3 373 6.6e-05 16.0 1.2 2 2 0.0067 1.4 1.8 0.0 287 333 279 326 250 333 0.82 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 9_7 - 74 FbpA PF05833.6 455 0.0007 12.1 3.6 1 1 3.7e-06 0.00075 12.0 3.6 396 451 9 63 2 67 0.77 # 7180 # 7401 # -1 # ID=9_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.518 1_11 - 84 Methyltrans_SAM PF10672.4 286 0.00036 13.3 0.0 1 1 2e-06 0.0004 13.2 0.0 196 261 9 69 4 77 0.78 # 8613 # 8864 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 3_12 - 426 Lycopene_cycl PF05834.7 374 5.6e-05 16.0 0.0 1 1 4.5e-07 9.2e-05 15.3 0.0 1 144 6 157 6 182 0.73 # 11620 # 12897 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_2 - 276 ABC_tran PF00005.22 137 7.7e-30 97.9 0.0 1 1 1.7e-31 1.1e-29 97.4 0.0 1 136 23 170 23 171 0.89 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 13_1 - 260 ABC_tran PF00005.22 137 0.0003 15.0 0.3 1 1 3.6e-05 0.0024 12.1 0.0 8 30 99 121 93 136 0.86 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_35 - 522 ABC_tran PF00005.22 137 0.00032 14.9 0.0 1 1 1.4e-05 0.00096 13.4 0.0 14 113 27 155 17 158 0.73 # 24402 # 25967 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_12 - 426 K_oxygenase PF13434.1 341 6.1e-118 387.5 0.0 1 1 3.6e-120 7.4e-118 387.2 0.0 2 340 4 333 3 334 0.96 # 11620 # 12897 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_23 - 228 Cons_hypoth95 PF03602.10 183 4.2e-05 16.9 0.0 1 2 0.00035 0.072 6.4 0.0 112 147 18 55 9 82 0.66 # 14882 # 15565 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_23 - 228 Cons_hypoth95 PF03602.10 183 4.2e-05 16.9 0.0 2 2 7e-05 0.014 8.6 0.0 41 62 162 183 145 219 0.78 # 14882 # 15565 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 13_1 - 260 RuvB_N PF05496.7 234 0.00075 12.5 0.0 1 1 6.5e-06 0.0013 11.7 0.0 50 119 102 182 92 190 0.65 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_4 - 1707 AAA_19 PF13245.1 76 2.4e-07 24.4 1.6 1 1 8.6e-09 8.8e-07 22.6 0.3 7 76 981 1047 974 1047 0.74 # 2246 # 7366 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 13_1 - 260 AAA_19 PF13245.1 76 0.00086 13.0 0.0 1 1 2.1e-05 0.0022 11.7 0.0 10 37 103 129 96 154 0.81 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 4_9 - 258 NAD_binding_10 PF13460.1 183 8.3e-05 16.6 1.5 1 1 3.5e-06 0.00072 13.5 1.5 2 179 11 232 10 236 0.54 # 7736 # 8509 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_23 - 876 AAA_10 PF12846.2 304 7.9e-49 160.6 0.0 1 1 2.6e-50 1.4e-48 159.8 0.0 1 294 479 768 479 774 0.88 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_5 - 736 AAA_10 PF12846.2 304 2e-10 34.4 0.0 1 1 7.3e-11 3.7e-09 30.3 0.0 3 296 187 494 186 500 0.69 # 7366 # 9573 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 13_1 - 260 AAA_10 PF12846.2 304 1.6e-05 18.3 0.7 1 2 3.8e-06 0.00019 14.8 0.1 1 33 102 134 102 171 0.89 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 AAA_10 PF12846.2 304 1.6e-05 18.3 0.7 2 2 0.097 4.9 0.3 0.0 202 247 142 192 134 202 0.68 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_2 - 276 AAA_10 PF12846.2 304 0.00037 13.9 1.4 1 2 4e-05 0.002 11.4 1.0 4 34 36 66 33 159 0.89 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_2 - 276 AAA_10 PF12846.2 304 0.00037 13.9 1.4 2 2 0.081 4.1 0.6 0.0 242 266 181 205 170 210 0.87 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_9 - 258 adh_short_C2 PF13561.1 241 3.4e-35 115.8 0.7 1 1 1.9e-37 3.9e-35 115.6 0.7 5 240 16 252 13 253 0.91 # 7736 # 8509 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 3_2 - 276 SbcCD_C PF13558.1 90 1.4e-06 22.1 0.0 1 1 4.8e-08 9.7e-06 19.4 0.0 26 89 136 186 119 187 0.79 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 13_1 - 260 ResIII PF04851.10 184 0.00075 13.3 0.0 1 2 6.9e-05 0.014 9.1 0.0 8 50 89 127 49 135 0.78 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 ResIII PF04851.10 184 0.00075 13.3 0.0 2 2 0.0088 1.8 2.3 0.0 112 163 131 181 127 202 0.72 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_36 - 341 Viral_helicase1 PF01443.13 234 1.3e-11 38.3 0.1 1 2 3.9e-07 4e-05 17.1 0.0 2 30 5 38 4 59 0.76 # 25952 # 26974 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_36 - 341 Viral_helicase1 PF01443.13 234 1.3e-11 38.3 0.1 2 2 1.4e-07 1.5e-05 18.5 0.1 63 233 133 330 122 331 0.67 # 25952 # 26974 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_4 - 1707 Viral_helicase1 PF01443.13 234 0.0018 11.7 0.0 1 2 0.00064 0.065 6.6 0.0 1 23 988 1011 988 1151 0.76 # 2246 # 7366 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_4 - 1707 Viral_helicase1 PF01443.13 234 0.0018 11.7 0.0 2 2 0.013 1.3 2.3 0.0 171 234 1387 1447 1342 1447 0.63 # 2246 # 7366 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 3_12 - 426 FMO-like PF00743.14 532 5.6e-06 18.6 0.0 1 2 3.9e-06 0.00079 11.5 0.0 142 200 143 198 95 219 0.87 # 11620 # 12897 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_12 - 426 FMO-like PF00743.14 532 5.6e-06 18.6 0.0 2 2 0.00035 0.071 5.1 0.0 317 342 319 344 311 377 0.81 # 11620 # 12897 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_12 - 426 NAD_binding_9 PF13454.1 156 7.1e-09 29.5 0.0 1 3 5.8e-08 1.2e-05 19.1 0.0 3 155 10 151 7 152 0.68 # 11620 # 12897 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_12 - 426 NAD_binding_9 PF13454.1 156 7.1e-09 29.5 0.0 2 3 0.02 4.1 1.1 0.0 2 31 186 214 185 229 0.79 # 11620 # 12897 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_12 - 426 NAD_binding_9 PF13454.1 156 7.1e-09 29.5 0.0 3 3 0.00086 0.18 5.5 0.0 116 155 287 332 254 333 0.73 # 11620 # 12897 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_9 - 258 Epimerase PF01370.16 236 0.00013 15.3 0.1 1 1 2.2e-06 0.00044 13.6 0.1 2 227 11 238 10 248 0.74 # 7736 # 8509 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_5 - 736 TrwB_AAD_bind PF10412.4 386 4.2e-150 493.5 0.0 1 1 5e-152 5.1e-150 493.2 0.0 2 386 172 561 171 561 0.99 # 7366 # 9573 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 2_23 - 876 TrwB_AAD_bind PF10412.4 386 8.3e-07 21.8 0.1 1 2 4.8e-08 4.9e-06 19.2 0.0 15 53 479 517 470 547 0.80 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_23 - 876 TrwB_AAD_bind PF10412.4 386 8.3e-07 21.8 0.1 2 2 0.041 4.2 -0.3 0.0 261 317 713 769 684 772 0.92 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_4 - 1707 AAA_11 PF13086.1 236 0.00033 14.2 2.3 1 1 3e-06 0.0006 13.3 0.0 2 75 969 1039 968 1060 0.80 # 2246 # 7366 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_5 - 736 T4SS-DNA_transf PF02534.9 469 1.2e-09 31.1 0.0 1 1 3.2e-11 3.3e-09 29.7 0.0 264 361 382 476 198 500 0.83 # 7366 # 9573 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 2_23 - 876 T4SS-DNA_transf PF02534.9 469 0.00042 12.8 0.0 1 2 0.0031 0.32 3.3 0.0 105 184 533 606 470 625 0.82 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_23 - 876 T4SS-DNA_transf PF02534.9 469 0.00042 12.8 0.0 2 2 0.00021 0.022 7.2 0.0 319 378 711 769 662 771 0.90 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 1_12 - 119 TIGR00755 TIGR00755 256 1.1e-06 21.7 0.0 1 1 7e-09 1.4e-06 21.3 0.0 8 74 29 97 24 105 0.89 # 8822 # 9178 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 2_23 - 876 Pox_A32 PF04665.7 241 0.0017 11.5 0.0 1 1 2.3e-05 0.0047 10.1 0.0 7 38 473 504 469 519 0.85 # 22958 # 25585 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 5_4 - 657 Plug PF07715.10 108 7.9e-24 78.0 1.9 1 1 3.4e-25 2.3e-23 76.5 1.9 3 108 46 149 44 149 0.94 # 1349 # 3319 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.489 3_13 - 733 Plug PF07715.10 108 8.3e-20 65.1 2.2 1 1 1.4e-21 9.8e-20 64.9 0.6 3 107 44 145 42 146 0.94 # 12982 # 15180 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.547 7_4 - 754 Plug PF07715.10 108 2.9e-10 34.4 4.8 1 1 4.3e-12 2.9e-10 34.4 4.8 13 107 61 166 43 167 0.89 # 2192 # 4453 # -1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 1_36 - 341 UvrD-helicase PF00580.16 315 2e-08 27.7 0.1 1 2 5.9e-06 0.0012 12.0 0.1 16 69 4 49 2 78 0.83 # 25952 # 26974 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_36 - 341 UvrD-helicase PF00580.16 315 2e-08 27.7 0.1 2 2 2.6e-06 0.00053 13.2 0.0 242 294 115 170 96 174 0.86 # 25952 # 26974 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 13_1 - 260 AAA_25 PF13481.1 194 5.1e-05 16.6 0.0 1 1 8.3e-07 8.4e-05 15.9 0.0 22 58 90 127 71 183 0.79 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_2 - 276 AAA_25 PF13481.1 194 0.0013 12.0 0.1 1 1 4.4e-05 0.0045 10.3 0.1 30 57 30 57 23 87 0.85 # 1342 # 2169 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 13_4 - 86 ABC_tran_2 PF12848.2 85 0.0092 9.8 6.4 1 1 5.8e-05 0.012 9.4 6.4 20 76 17 76 13 84 0.75 # 3038 # 3295 # -1 # ID=13_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.539 13_1 - 260 AAA_28 PF13521.1 163 0.0024 11.7 1.8 1 2 0.063 13 -0.4 0.1 84 110 35 63 3 82 0.67 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 AAA_28 PF13521.1 163 0.0024 11.7 1.8 2 2 3e-05 0.0061 10.4 0.2 1 43 104 151 104 172 0.70 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 AAA_5 PF07728.9 139 6e-05 16.7 0.3 1 2 3.6e-06 0.00074 13.2 0.2 1 74 104 173 104 180 0.72 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_1 - 260 AAA_5 PF07728.9 139 6e-05 16.7 0.3 2 2 0.053 11 -0.3 0.0 90 123 225 258 218 259 0.63 # 463 # 1242 # -1 # ID=13_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d23dde4d-56f8-4de2-98d5-bdfae54c418d # Target file: checkm_output/bins/pm819/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm819/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d23dde4d-56f8-4de2-98d5-bdfae54c418d checkm_output/bins/pm819/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:10:02 2020 # [ok]