# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_20 - 347 Mg_chelatase PF01078.16 207 1.5e-05 16.9 0.1 1 1 4.5e-07 3.7e-05 15.6 0.0 20 44 122 146 105 158 0.80 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_37 - 234 UPF0020 PF01170.13 180 2.9e-06 19.6 0.0 1 2 5.1e-05 0.0042 9.3 0.0 103 120 17 34 5 80 0.83 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 1_37 - 234 UPF0020 PF01170.13 180 2.9e-06 19.6 0.0 2 2 9.4e-05 0.0077 8.4 0.0 28 51 170 193 165 227 0.75 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 1_6 - 260 IstB_IS21 PF01695.12 178 7.1e-66 213.6 0.0 1 1 4.4e-67 1.8e-65 212.3 0.0 2 177 56 233 55 234 0.96 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 IstB_IS21 PF01695.12 178 5.1e-06 18.6 0.0 1 1 2.9e-07 1.2e-05 17.4 0.0 28 70 105 147 90 171 0.79 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_44 - 402 MipZ PF09140.6 261 1.5e-06 20.1 0.0 1 2 0.0027 0.22 3.1 0.0 3 50 111 163 109 193 0.73 # 41979 # 43184 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467 1_44 - 402 MipZ PF09140.6 261 1.5e-06 20.1 0.0 2 2 8.2e-07 6.7e-05 14.6 0.0 86 136 232 282 220 296 0.87 # 41979 # 43184 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467 1_28 - 181 SSB PF00436.20 104 5.6e-41 131.3 0.2 1 1 8.4e-43 6.9e-41 131.0 0.2 1 99 6 105 6 113 0.96 # 30527 # 31069 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.632 1_20 - 347 AAA_2 PF07724.9 171 2.4e-07 23.5 0.0 1 1 7.6e-09 6.2e-07 22.1 0.0 5 105 126 220 122 226 0.85 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AAA_22 PF13401.1 131 1e-06 21.6 0.0 1 2 8.3e-06 0.00034 13.4 0.1 4 28 101 125 98 148 0.75 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_6 - 260 AAA_22 PF13401.1 131 1e-06 21.6 0.0 2 2 0.0016 0.067 6.0 0.0 77 101 151 178 124 201 0.64 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 AAA_22 PF13401.1 131 9.3e-06 18.5 3.5 1 3 1.7e-05 0.0007 12.4 0.1 7 26 127 146 118 153 0.87 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_20 - 347 AAA_22 PF13401.1 131 9.3e-06 18.5 3.5 2 3 0.0097 0.4 3.5 0.0 71 117 167 223 152 238 0.66 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_20 - 347 AAA_22 PF13401.1 131 9.3e-06 18.5 3.5 3 3 0.033 1.4 1.7 0.3 37 112 245 327 207 338 0.72 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_11 - 307 Methyltransf_11 PF08241.7 95 1.5e-06 21.3 0.0 1 1 4e-08 3.3e-06 20.2 0.0 49 95 183 229 139 229 0.83 # 12358 # 13278 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 2_7 - 492 DNA_methylase PF00145.12 335 1.9e-79 259.8 0.0 1 1 4.9e-81 4e-79 258.7 0.0 1 331 110 471 110 474 0.86 # 5797 # 7272 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.480 4_2 - 79 AAA_15 PF13175.1 415 5.6e-10 31.4 0.0 1 1 6.8e-12 5.6e-10 31.3 0.0 2 46 5 48 4 65 0.89 # 239 # 475 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_37 - 234 N6_N4_Mtase PF01555.13 231 9.4e-33 106.2 0.0 1 2 6.8e-13 5.6e-11 34.9 0.0 1 113 21 130 21 137 0.85 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 1_37 - 234 N6_N4_Mtase PF01555.13 231 9.4e-33 106.2 0.0 2 2 2e-23 1.6e-21 69.4 0.0 170 227 149 206 135 210 0.92 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 1_20 - 347 AAA_17 PF13207.1 121 1.9e-08 27.8 0.0 1 1 1.7e-09 6.8e-08 26.0 0.0 1 55 126 181 126 324 0.69 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AAA_17 PF13207.1 121 0.00032 14.2 0.0 1 1 1.3e-05 0.00054 13.4 0.0 2 26 104 131 103 216 0.74 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 4_2 - 79 AAA_21 PF13304.1 303 2.5e-06 20.2 0.0 1 1 3.4e-08 2.8e-06 20.0 0.0 2 24 27 49 26 69 0.82 # 239 # 475 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_6 - 260 PhoH PF02562.11 205 2.6e-07 22.7 0.1 1 1 1e-08 4.1e-07 22.0 0.1 14 56 96 138 84 163 0.80 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 PhoH PF02562.11 205 0.00048 12.0 0.0 1 1 2.4e-05 0.00098 11.0 0.0 19 40 124 145 103 153 0.77 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AFG1_ATPase PF03969.11 362 0.00025 12.5 0.0 1 1 5.8e-06 0.00048 11.6 0.0 64 214 103 251 81 258 0.78 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 T2SE PF00437.15 272 0.0003 12.3 0.0 1 1 6.4e-06 0.00052 11.5 0.0 101 152 100 148 25 151 0.82 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_20 - 347 SKI PF01202.17 158 0.00032 13.2 0.2 1 2 0.093 7.6 -1.0 0.1 102 148 56 105 44 118 0.65 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_20 - 347 SKI PF01202.17 158 0.00032 13.2 0.2 2 2 1.8e-05 0.0015 11.0 0.0 1 37 133 171 133 179 0.88 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 4_2 - 79 G-alpha PF00503.15 389 0.0003 12.1 0.0 1 1 4e-06 0.00033 12.0 0.0 62 106 28 72 17 76 0.82 # 239 # 475 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_20 - 347 Zeta_toxin PF06414.7 201 2.2e-05 16.3 0.0 1 1 6e-07 4.9e-05 15.1 0.0 14 52 122 159 109 183 0.80 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 4_2 - 79 SMC_N PF02463.14 220 1.7e-11 36.4 0.0 1 1 2.2e-13 1.8e-11 36.3 0.0 2 73 4 72 3 77 0.86 # 239 # 475 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_20 - 347 AAA_16 PF13191.1 185 7.5e-06 18.6 1.1 1 1 5.4e-07 2.2e-05 17.1 0.2 25 81 125 182 101 325 0.81 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AAA_16 PF13191.1 185 1.2e-05 18.0 2.4 1 2 2.4e-06 9.8e-05 15.0 0.1 23 51 100 128 86 149 0.80 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_6 - 260 AAA_16 PF13191.1 185 1.2e-05 18.0 2.4 2 2 0.071 2.9 0.4 0.0 124 162 143 175 125 192 0.74 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 4_2 - 79 AAA_23 PF13476.1 202 3e-12 39.9 0.0 1 1 3.7e-14 3.1e-12 39.9 0.0 1 51 6 56 6 73 0.90 # 239 # 475 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_20 - 347 AAA_18 PF13238.1 129 2.4e-06 20.5 0.2 1 1 1.9e-07 1.5e-05 17.9 0.0 1 75 127 225 127 261 0.62 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_44 - 402 CbiA PF01656.18 195 8.9e-19 60.2 0.0 1 1 5e-20 2.1e-18 59.0 0.0 1 142 111 292 111 327 0.75 # 41979 # 43184 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467 1_6 - 260 CbiA PF01656.18 195 0.00079 11.5 0.0 1 1 2.5e-05 0.001 11.1 0.0 3 42 105 145 104 254 0.75 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 KaiC PF06745.8 227 4.3e-06 18.6 0.0 1 2 1.9e-06 0.00015 13.5 0.0 10 37 115 142 105 147 0.88 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_20 - 347 KaiC PF06745.8 227 4.3e-06 18.6 0.0 2 2 0.0035 0.29 2.8 0.0 122 160 192 231 160 253 0.84 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AAA_14 PF13173.1 128 2.9e-07 23.1 0.0 1 2 3.4e-08 1.4e-06 20.9 0.0 3 97 102 203 100 219 0.64 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_6 - 260 AAA_14 PF13173.1 128 2.9e-07 23.1 0.0 2 2 0.096 4 0.0 0.0 14 46 215 247 212 257 0.80 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 AAA_14 PF13173.1 128 0.00013 14.5 0.0 1 1 6.8e-06 0.00028 13.4 0.0 3 99 125 233 123 259 0.71 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 4_2 - 79 AAA_29 PF13555.1 62 5.7e-09 28.1 0.0 1 1 8.6e-11 7.1e-09 27.8 0.0 2 50 5 51 4 57 0.83 # 239 # 475 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_20 - 347 AAA PF00004.24 132 6.2e-33 106.4 0.0 1 2 0.062 2.5 0.9 0.0 76 99 32 55 21 83 0.80 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_20 - 347 AAA PF00004.24 132 6.2e-33 106.4 0.0 2 2 1.8e-33 7.2e-32 103.0 0.0 1 130 127 251 127 253 0.94 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AAA PF00004.24 132 1.7e-08 27.3 0.0 1 1 8.2e-10 3.4e-08 26.4 0.0 1 70 104 175 104 207 0.82 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_6 - 260 Bac_DnaA PF00308.13 219 4.2e-09 28.9 0.0 1 1 7.8e-11 6.4e-09 28.4 0.0 36 136 103 201 90 209 0.84 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_6 - 260 DUF258 PF03193.11 161 0.00017 13.4 0.0 1 1 3.7e-06 0.0003 12.6 0.0 26 59 92 125 80 153 0.82 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_44 - 402 AAA_31 PF13614.1 157 8.3e-05 15.2 0.0 1 1 5.5e-06 0.00045 12.8 0.0 108 147 235 273 231 279 0.86 # 41979 # 43184 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467 1_6 - 260 NTPase_1 PF03266.10 168 0.00019 13.8 0.1 1 2 0.0015 0.12 4.6 0.1 2 30 104 132 103 143 0.82 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_6 - 260 NTPase_1 PF03266.10 168 0.00019 13.8 0.1 2 2 0.0003 0.025 6.9 0.0 87 108 155 176 141 202 0.77 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 AAA_33 PF13671.1 143 1.2e-07 24.3 0.0 1 1 4.7e-09 3.8e-07 22.7 0.0 2 91 127 248 127 267 0.71 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_37 - 234 Methyltransf_26 PF13659.1 117 2.2e-11 36.5 0.2 1 2 6.4e-07 2.6e-05 16.9 0.0 63 113 13 70 3 86 0.72 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 1_37 - 234 Methyltransf_26 PF13659.1 117 2.2e-11 36.5 0.2 2 2 3.9e-07 1.6e-05 17.6 0.1 4 44 174 213 171 228 0.80 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 1_11 - 307 Methyltransf_26 PF13659.1 117 0.00029 13.5 0.0 1 1 9.9e-06 0.00041 13.0 0.0 92 113 188 229 92 233 0.80 # 12358 # 13278 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 4_2 - 79 DUF2813 PF11398.3 373 1.5e-05 16.8 0.0 1 1 2.1e-07 1.8e-05 16.6 0.0 11 50 12 52 3 56 0.79 # 239 # 475 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_20 - 347 ABC_tran PF00005.22 137 0.00032 13.6 0.0 1 1 3.9e-05 0.0011 12.0 0.0 8 35 121 148 117 176 0.92 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 ABC_tran PF00005.22 137 0.00043 13.2 0.2 1 1 6.1e-05 0.0017 11.3 0.1 8 31 98 121 95 132 0.86 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 4_2 - 79 ABC_tran PF00005.22 137 0.00049 13.1 0.0 1 1 1.8e-05 0.0005 13.0 0.0 15 42 28 55 17 75 0.78 # 239 # 475 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_37 - 234 Cons_hypoth95 PF03602.10 183 3.3e-06 19.2 0.0 1 2 0.00016 0.013 7.4 0.0 113 169 19 77 12 86 0.70 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 1_37 - 234 Cons_hypoth95 PF03602.10 183 3.3e-06 19.2 0.0 2 2 3.1e-05 0.0026 9.8 0.0 20 60 149 188 142 225 0.73 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 4_2 - 79 DAP3 PF10236.4 309 0.00074 11.1 0.0 1 1 1e-05 0.00083 10.9 0.0 11 41 12 42 3 47 0.81 # 239 # 475 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_20 - 347 RuvB_N PF05496.7 234 2.6e-05 16.0 0.0 1 1 6.7e-07 5.5e-05 14.9 0.0 51 78 125 152 86 195 0.79 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_20 - 347 AAA_19 PF13245.1 76 9e-07 21.3 0.0 1 1 7.1e-08 2.9e-06 19.6 0.0 10 34 125 148 115 186 0.78 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AAA_19 PF13245.1 76 0.00055 12.3 0.2 1 1 5.3e-05 0.0022 10.5 0.0 11 35 103 126 95 157 0.81 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_6 - 260 AAA_10 PF12846.2 304 3e-05 16.1 0.2 1 2 0.014 1.2 1.1 0.0 106 155 28 69 4 89 0.61 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_6 - 260 AAA_10 PF12846.2 304 3e-05 16.1 0.2 2 2 4.4e-06 0.00036 12.6 0.1 3 35 103 135 101 172 0.84 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 ResIII PF04851.10 184 0.00024 13.6 0.0 1 1 6.2e-06 0.00051 12.5 0.0 22 48 119 147 96 191 0.80 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_11 - 307 Methyltransf_31 PF13847.1 152 0.00023 13.4 0.0 1 1 4.8e-06 0.00039 12.7 0.0 66 113 185 234 180 269 0.82 # 12358 # 13278 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_20 - 347 TIP49 PF06068.8 398 2.9e-05 15.5 0.1 1 1 7.4e-07 6.1e-05 14.4 0.0 42 79 115 151 103 176 0.82 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_20 - 347 AAA_11 PF13086.1 236 0.00011 14.4 0.0 1 1 2.9e-06 0.00024 13.3 0.0 14 42 121 153 95 343 0.73 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 Sigma54_activ_2 PF14532.1 138 0.00032 13.4 0.0 1 1 6.3e-06 0.00051 12.7 0.0 9 64 87 144 84 229 0.70 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_11 - 307 Methyltransf_23 PF13489.1 161 0.00035 12.9 0.0 1 1 7.1e-06 0.00059 12.2 0.0 74 115 186 231 80 253 0.63 # 12358 # 13278 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_20 - 347 RNA_helicase PF00910.17 107 1.6e-05 17.7 0.0 1 1 4.5e-07 3.7e-05 16.5 0.0 1 106 127 232 127 233 0.82 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_16 - 137 tRNA_anti-codon PF01336.20 75 3.1e-05 16.5 0.0 1 2 0.023 1.9 1.1 0.0 43 62 61 80 51 83 0.80 # 17314 # 17724 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 1_16 - 137 tRNA_anti-codon PF01336.20 75 3.1e-05 16.5 0.0 2 2 1.9e-06 0.00015 14.2 0.0 3 68 71 129 69 135 0.82 # 17314 # 17724 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 1_20 - 347 AAA_24 PF13479.1 213 0.00047 12.4 0.1 1 1 3.1e-05 0.0013 11.0 0.1 5 23 126 144 124 154 0.84 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AAA_24 PF13479.1 213 0.0011 11.2 0.1 1 1 6.1e-05 0.0025 10.0 0.1 5 23 103 121 99 127 0.85 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_16 - 137 BOF PF04076.8 103 2.5e-22 71.3 0.3 1 1 4.2e-24 3.4e-22 70.9 0.2 9 102 40 134 29 135 0.85 # 17314 # 17724 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 1_6 - 260 NACHT PF05729.7 166 0.0001 14.6 0.0 1 1 2.1e-06 0.00017 13.9 0.0 3 49 104 151 102 200 0.81 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_6 - 260 AAA_25 PF13481.1 194 5.9e-07 21.7 0.1 1 1 4.4e-08 1.8e-06 20.1 0.1 9 60 72 128 68 201 0.77 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 AAA_25 PF13481.1 194 1.6e-05 17.0 0.3 1 1 1.3e-06 5.1e-05 15.3 0.1 28 56 120 147 97 176 0.83 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_37 - 234 Methyltransf_15 PF09445.5 164 0.00061 12.0 0.0 1 2 0.023 1.9 0.6 0.0 53 80 4 30 2 38 0.91 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 1_37 - 234 Methyltransf_15 PF09445.5 164 0.00061 12.0 0.0 2 2 7e-05 0.0057 8.8 0.0 3 30 173 200 171 213 0.90 # 35913 # 36614 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.608 1_20 - 347 AAA_28 PF13521.1 163 5.7e-06 19.0 0.1 1 1 3.6e-07 1.5e-05 17.7 0.0 1 51 126 177 126 257 0.86 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AAA_28 PF13521.1 163 0.00021 13.9 0.0 1 1 1e-05 0.00041 13.0 0.0 1 49 103 156 103 171 0.73 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_20 - 347 AAA_5 PF07728.9 139 1.3e-06 20.9 3.4 1 1 1.2e-07 4.9e-06 19.0 0.3 2 37 127 162 126 245 0.64 # 23863 # 24903 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_6 - 260 AAA_5 PF07728.9 139 1.5e-05 17.4 0.0 1 1 9.1e-07 3.7e-05 16.1 0.0 1 74 103 172 103 177 0.80 # 7464 # 8243 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/1cd86bf1-e7e4-47ee-ba39-fffc9f831b74 # Target file: checkm_output/bins/pm689/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm689/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/1cd86bf1-e7e4-47ee-ba39-fffc9f831b74 checkm_output/bins/pm689/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:08:41 2020 # [ok]