# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_4 - 237 Mg_chelatase PF01078.16 207 0.00071 12.0 0.0 1 1 8.8e-06 0.0011 11.4 0.0 18 52 31 65 21 88 0.80 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_3 - 793 UPF0020 PF01170.13 180 9.4e-08 25.0 0.0 1 1 2.7e-09 1.7e-07 24.2 0.0 30 122 229 327 225 333 0.74 # 4437 # 6815 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_62 - 226 UPF0020 PF01170.13 180 3.2e-06 20.0 0.0 1 2 0.00025 0.016 8.0 0.0 102 118 16 32 3 82 0.80 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 1_62 - 226 UPF0020 PF01170.13 180 3.2e-06 20.0 0.0 2 2 5.8e-05 0.0037 10.1 0.0 27 54 162 188 158 216 0.72 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 2_3 - 526 Seryl_tRNA_N PF02403.17 108 0.00097 12.4 8.8 1 3 0.0038 0.48 3.8 0.1 39 104 227 293 206 297 0.90 # 3940 # 5517 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 2_3 - 526 Seryl_tRNA_N PF02403.17 108 0.00097 12.4 8.8 2 3 0.0012 0.15 5.4 0.1 27 59 324 356 312 377 0.85 # 3940 # 5517 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 2_3 - 526 Seryl_tRNA_N PF02403.17 108 0.00097 12.4 8.8 3 3 0.00086 0.11 5.8 1.7 17 107 396 485 390 486 0.75 # 3940 # 5517 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 1_32 - 62 IstB_IS21 PF01695.12 178 0.00083 12.0 0.0 1 1 6.9e-06 0.00087 12.0 0.0 45 65 3 23 2 44 0.89 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_82 - 389 MipZ PF09140.6 261 5.4e-06 18.8 0.3 1 2 3.5e-06 0.00044 12.6 0.0 2 47 108 153 107 157 0.87 # 79569 # 80735 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 1_82 - 389 MipZ PF09140.6 261 5.4e-06 18.8 0.3 2 2 0.0011 0.14 4.3 0.0 88 134 224 270 197 292 0.85 # 79569 # 80735 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 3_3 - 553 3HCDH_N PF02737.13 180 0.00042 13.2 0.1 1 1 5.8e-06 0.00073 12.4 0.1 3 75 154 226 152 243 0.82 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_13 - 1747 UvrD_C_2 PF13538.1 104 3.3e-06 20.5 0.1 1 1 2.3e-07 2.9e-05 17.4 0.0 3 100 1337 1438 1335 1442 0.75 # 15750 # 20990 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.658 3_3 - 553 Pyr_redox_2 PF07992.9 201 3.2e-31 102.0 0.0 1 1 6.2e-33 7.8e-31 100.7 0.0 1 199 2 287 2 289 0.91 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_29 - 877 DUF87 PF01935.12 229 4.7e-06 19.8 0.0 1 1 2.2e-07 1.4e-05 18.3 0.0 26 215 482 664 480 677 0.59 # 35403 # 38033 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_1 - 1014 DUF87 PF01935.12 229 0.00069 12.7 0.2 1 1 5.2e-05 0.0033 10.5 0.0 31 50 323 345 314 362 0.78 # 3 # 3044 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_32 - 62 Septin PF00735.13 281 0.00031 13.0 0.0 1 1 2.4e-06 0.00031 13.0 0.0 5 33 6 34 3 60 0.66 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 2_10 - 303 AAA_22 PF13401.1 131 1.3e-16 54.2 0.0 1 1 5.1e-18 2.1e-16 53.5 0.0 7 127 64 191 59 195 0.94 # 12050 # 12958 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 4_4 - 237 AAA_22 PF13401.1 131 4.4e-06 20.1 0.1 1 1 1.1e-06 4.7e-05 16.8 0.1 9 100 40 179 35 211 0.55 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_32 - 62 AAA_22 PF13401.1 131 0.00016 15.1 0.1 1 1 6.2e-06 0.00026 14.4 0.1 4 33 5 34 2 61 0.77 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_75 - 478 DNA_methylase PF00145.12 335 1.4e-79 260.8 0.0 1 1 2.4e-81 3.1e-79 259.7 0.0 1 331 96 457 96 460 0.87 # 71440 # 72873 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.481 4_4 - 237 KAP_NTPase PF07693.9 325 0.00034 12.9 0.1 1 2 2.1e-05 0.0026 9.9 0.0 14 40 29 55 22 84 0.89 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 KAP_NTPase PF07693.9 325 0.00034 12.9 0.1 2 2 0.013 1.6 0.8 0.1 184 225 178 219 168 228 0.86 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 AAA_15 PF13175.1 415 1.3e-06 20.9 0.0 1 2 0.00014 0.017 7.3 0.0 27 43 40 56 19 77 0.83 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 AAA_15 PF13175.1 415 1.3e-06 20.9 0.0 2 2 5.9e-06 0.00074 11.8 0.0 371 415 165 211 144 211 0.90 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 3_3 - 553 NAD_binding_7 PF13241.1 103 0.00014 15.4 0.1 1 2 0.019 2.4 1.8 0.0 9 37 2 32 1 103 0.75 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 NAD_binding_7 PF13241.1 103 0.00014 15.4 0.1 2 2 2.1e-05 0.0026 11.3 0.0 8 75 151 250 136 280 0.61 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_62 - 226 N6_N4_Mtase PF01555.13 231 2.5e-36 118.5 0.0 1 1 2.2e-36 2.8e-34 111.8 0.0 1 228 21 200 21 203 0.91 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 4_4 - 237 AAA_17 PF13207.1 121 2.1e-06 21.8 0.0 1 1 9.4e-08 6e-06 20.4 0.0 1 47 37 87 37 139 0.72 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_32 - 62 AAA_17 PF13207.1 121 0.00038 14.5 0.4 1 1 8.8e-06 0.00056 14.0 0.4 2 23 8 29 7 60 0.69 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 4_4 - 237 AAA_21 PF13304.1 303 8.8e-13 42.0 0.0 1 2 1.4e-07 8.6e-06 19.1 0.0 3 22 39 58 37 106 0.83 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 AAA_21 PF13304.1 303 8.8e-13 42.0 0.0 2 2 3e-08 1.9e-06 21.2 0.0 234 302 145 211 141 212 0.92 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_76 - 713 AAA_21 PF13304.1 303 0.011 8.9 5.8 1 2 0.0011 0.068 6.3 0.1 7 28 29 45 27 213 0.81 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_76 - 713 AAA_21 PF13304.1 303 0.011 8.9 5.8 2 2 0.0024 0.15 5.1 0.2 127 298 290 488 243 490 0.72 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_32 - 62 Miro PF08477.8 119 0.00021 15.0 0.0 1 1 1.7e-06 0.00021 15.0 0.0 1 21 7 27 7 57 0.79 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_32 - 62 MobB PF03205.9 140 9e-06 18.7 0.0 1 1 1.6e-07 9.8e-06 18.6 0.0 3 48 8 53 6 59 0.72 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 4_4 - 237 MobB PF03205.9 140 0.00084 12.3 0.1 1 1 2.5e-05 0.0016 11.4 0.1 2 19 37 54 36 62 0.89 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_82 - 389 ArsA_ATPase PF02374.10 305 2.3e-06 20.1 0.4 1 2 1.7e-06 0.00021 13.6 0.1 9 36 115 142 109 151 0.89 # 79569 # 80735 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 1_82 - 389 ArsA_ATPase PF02374.10 305 2.3e-06 20.1 0.4 2 2 0.0011 0.14 4.3 0.0 123 136 231 244 221 251 0.84 # 79569 # 80735 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 1_32 - 62 PhoH PF02562.11 205 3.8e-05 16.2 0.0 1 1 3e-07 3.8e-05 16.2 0.0 18 52 4 38 1 60 0.79 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_32 - 62 T2SE PF00437.15 272 2.8e-05 16.3 0.0 1 1 2.3e-07 2.9e-05 16.3 0.0 127 150 4 27 2 43 0.79 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_32 - 62 Zeta_toxin PF06414.7 201 0.00015 14.1 0.4 1 2 4.7e-06 0.0003 13.1 0.2 15 40 4 29 2 47 0.85 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_32 - 62 Zeta_toxin PF06414.7 201 0.00015 14.1 0.4 2 2 0.039 2.4 0.4 0.0 142 164 36 60 22 61 0.56 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_14 - 731 Zeta_toxin PF06414.7 201 0.00084 11.7 0.0 1 2 8.4e-05 0.0053 9.1 0.0 21 51 190 220 182 262 0.83 # 20990 # 23182 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.576 1_14 - 731 Zeta_toxin PF06414.7 201 0.00084 11.7 0.0 2 2 0.075 4.7 -0.6 0.0 54 90 283 320 279 337 0.87 # 20990 # 23182 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.576 3_3 - 553 NAD_binding_8 PF13450.1 68 1.5e-08 27.9 5.8 1 2 7.3e-07 9.2e-05 15.7 0.3 1 32 5 38 5 53 0.90 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 NAD_binding_8 PF13450.1 68 1.5e-08 27.9 5.8 2 2 2.5e-06 0.00031 14.0 0.1 2 30 156 184 155 185 0.95 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_4 - 237 SMC_N PF02463.14 220 5.5e-09 28.8 0.0 1 2 0.00032 0.013 7.9 0.1 26 44 37 55 23 75 0.83 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 SMC_N PF02463.14 220 5.5e-09 28.8 0.0 2 2 1.5e-07 6.1e-06 18.8 0.0 133 212 144 221 120 228 0.84 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_76 - 713 SMC_N PF02463.14 220 8e-05 15.2 0.2 1 2 0.00032 0.013 7.9 0.0 13 49 11 46 2 57 0.78 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_76 - 713 SMC_N PF02463.14 220 8e-05 15.2 0.2 2 2 0.0018 0.075 5.4 0.0 135 186 327 471 81 505 0.73 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_32 - 62 SMC_N PF02463.14 220 0.00053 12.5 0.0 1 1 1.3e-05 0.00053 12.5 0.0 26 58 7 40 2 56 0.77 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_82 - 389 VirC1 PF07015.6 231 7.2e-05 15.2 0.0 1 2 0.00028 0.035 6.3 0.0 4 42 109 147 107 154 0.91 # 79569 # 80735 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 1_82 - 389 VirC1 PF07015.6 231 7.2e-05 15.2 0.0 2 2 0.00026 0.033 6.5 0.0 84 139 235 290 220 316 0.77 # 79569 # 80735 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 1_14 - 731 AAA_16 PF13191.1 185 1.9e-06 21.2 0.0 1 1 4.7e-07 1.5e-05 18.3 0.0 20 55 181 225 177 267 0.67 # 20990 # 23182 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.576 4_4 - 237 AAA_16 PF13191.1 185 1.6e-05 18.2 1.5 1 1 1.2e-06 3.8e-05 17.0 1.5 23 51 34 62 23 208 0.83 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 2_10 - 303 AAA_16 PF13191.1 185 5.6e-05 16.4 0.0 1 1 4.8e-05 0.0015 11.8 0.0 8 48 45 85 43 186 0.69 # 12050 # 12958 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_32 - 62 AAA_16 PF13191.1 185 0.0002 14.6 0.0 1 1 7.1e-06 0.00022 14.4 0.0 22 51 3 32 1 55 0.79 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_76 - 713 AAA_23 PF13476.1 202 3.4e-08 27.2 7.9 1 1 4.3e-09 2.7e-07 24.3 7.9 2 196 3 382 2 387 0.55 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 4_4 - 237 AAA_23 PF13476.1 202 0.0003 14.3 0.0 1 1 7e-06 0.00044 13.8 0.0 21 40 37 56 23 70 0.85 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 AAA_18 PF13238.1 129 6e-05 16.6 0.0 1 2 1.3e-05 0.00081 13.0 0.0 1 18 38 55 38 99 0.76 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 AAA_18 PF13238.1 129 6e-05 16.6 0.0 2 2 0.049 3.1 1.4 0.0 28 87 155 212 126 224 0.69 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_32 - 62 AAA_18 PF13238.1 129 0.00014 15.4 0.0 1 1 2.4e-06 0.00015 15.3 0.0 1 27 8 42 8 61 0.64 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_76 - 713 AAA_13 PF13166.1 712 3e-20 65.4 6.2 1 3 4.7e-07 3e-05 15.8 0.1 15 76 20 95 7 146 0.64 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_76 - 713 AAA_13 PF13166.1 712 3e-20 65.4 6.2 2 3 6.2e-05 0.0039 8.8 1.5 232 387 184 381 158 384 0.53 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_76 - 713 AAA_13 PF13166.1 712 3e-20 65.4 6.2 3 3 1.4e-15 8.7e-14 44.0 0.6 414 572 331 490 308 689 0.79 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 2_3 - 526 AAA_13 PF13166.1 712 0.0033 9.1 17.5 1 2 4.5e-05 0.0029 9.3 2.9 365 468 251 356 202 376 0.54 # 3940 # 5517 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 2_3 - 526 AAA_13 PF13166.1 712 0.0033 9.1 17.5 2 2 0.00065 0.041 5.5 7.0 322 439 392 519 372 525 0.75 # 3940 # 5517 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 1_82 - 389 CbiA PF01656.18 195 6.5e-37 120.0 0.0 1 1 1.4e-38 8.7e-37 119.6 0.0 2 194 110 339 109 340 0.80 # 79569 # 80735 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 1_32 - 62 CbiA PF01656.18 195 0.00071 12.2 0.0 1 1 1.2e-05 0.00075 12.1 0.0 4 24 10 30 8 48 0.86 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 3_3 - 553 HI0933_like PF03486.9 409 7.9e-07 21.0 5.2 1 3 0.0028 0.35 2.4 0.6 2 32 2 34 1 38 0.74 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 HI0933_like PF03486.9 409 7.9e-07 21.0 5.2 2 3 0.0022 0.27 2.8 0.1 4 35 154 185 151 190 0.90 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 HI0933_like PF03486.9 409 7.9e-07 21.0 5.2 3 3 1.6e-07 2.1e-05 16.3 0.0 112 165 194 246 188 268 0.91 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_4 - 237 AAA_29 PF13555.1 62 3.4e-07 23.0 0.0 1 1 9.4e-09 5.9e-07 22.2 0.0 17 50 30 62 23 67 0.79 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_32 - 62 AAA_29 PF13555.1 62 0.00016 14.4 0.2 1 1 7.8e-06 0.00049 12.9 0.1 22 39 4 21 1 29 0.86 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_32 - 62 Sigma54_activat PF00158.21 168 0.00054 12.7 0.0 1 1 4.4e-06 0.00056 12.6 0.0 21 44 4 27 1 42 0.79 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 3_3 - 553 Pyr_redox_3 PF13738.1 203 7.6e-10 32.4 0.1 1 2 1.6e-05 0.002 11.4 0.0 89 196 64 179 44 182 0.73 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 Pyr_redox_3 PF13738.1 203 7.6e-10 32.4 0.1 2 2 2.5e-07 3.2e-05 17.3 0.0 81 141 190 249 180 274 0.87 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_4 - 237 MMR_HSR1 PF01926.18 116 0.00042 13.5 0.0 1 2 1.3e-05 0.0016 11.7 0.0 2 19 38 55 37 98 0.90 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 MMR_HSR1 PF01926.18 116 0.00042 13.5 0.0 2 2 0.062 7.8 -0.2 0.0 45 90 164 207 102 227 0.65 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 2_10 - 303 TniB PF05621.6 302 2.9e-212 695.9 5.2 1 1 2.6e-214 3.2e-212 695.7 5.2 1 302 1 302 1 302 1.00 # 12050 # 12958 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_3 - 793 N6_Mtase PF02384.11 311 9.7e-54 175.7 0.0 1 1 2.2e-55 1.4e-53 175.2 0.0 3 276 177 489 175 507 0.85 # 4437 # 6815 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_45 - 277 N6_Mtase PF02384.11 311 4.5e-11 35.5 0.0 1 1 1e-12 6.4e-11 35.0 0.0 24 120 137 239 128 255 0.84 # 47310 # 48140 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.552 4_4 - 237 DUF258 PF03193.11 161 0.00011 14.7 0.0 1 1 1.4e-06 0.00017 14.0 0.0 32 56 31 56 20 68 0.80 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_14 - 731 TraG-D_C PF12696.2 128 4.4e-19 61.9 0.0 1 1 2.1e-20 1.3e-18 60.3 0.0 1 127 419 541 419 542 0.85 # 20990 # 23182 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.576 1_29 - 877 TraG-D_C PF12696.2 128 0.0011 12.1 0.2 1 1 3.5e-05 0.0022 11.1 0.2 18 74 715 771 706 775 0.91 # 35403 # 38033 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_82 - 389 AAA_31 PF13614.1 157 1.2e-09 31.5 0.0 1 2 1.4e-08 1.7e-06 21.2 0.0 2 49 108 155 107 195 0.92 # 79569 # 80735 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 1_82 - 389 AAA_31 PF13614.1 157 1.2e-09 31.5 0.0 2 2 0.00018 0.023 7.9 0.1 110 152 227 268 223 272 0.84 # 79569 # 80735 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 4_4 - 237 AAA_33 PF13671.1 143 7.9e-05 15.8 0.6 1 1 3.5e-06 0.00022 14.4 0.6 1 19 37 55 37 209 0.92 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_32 - 62 AAA_33 PF13671.1 143 0.00056 13.0 2.2 1 1 3.1e-05 0.002 11.3 2.2 2 31 8 33 8 61 0.63 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_62 - 226 Methyltransf_26 PF13659.1 117 8.5e-13 41.6 0.1 1 2 1.3e-07 5.3e-06 19.7 0.0 53 114 3 71 2 74 0.76 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 1_62 - 226 Methyltransf_26 PF13659.1 117 8.5e-13 41.6 0.1 2 2 1.2e-07 5.1e-06 19.8 0.0 4 44 167 206 164 220 0.83 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 1_3 - 793 Methyltransf_26 PF13659.1 117 3.7e-10 33.1 0.0 1 1 2e-11 8.4e-10 32.0 0.0 5 86 232 327 229 389 0.78 # 4437 # 6815 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_45 - 277 Methyltransf_26 PF13659.1 117 0.00073 12.8 0.0 1 1 3.8e-05 0.0016 11.7 0.0 3 83 170 255 168 275 0.75 # 47310 # 48140 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.552 1_13 - 1747 AAA_30 PF13604.1 196 4.1e-41 133.9 11.4 1 2 0.00037 0.016 8.0 2.7 8 149 419 552 415 559 0.86 # 15750 # 20990 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.658 1_13 - 1747 AAA_30 PF13604.1 196 4.1e-41 133.9 11.4 2 2 1.6e-41 6.8e-40 129.9 0.2 2 184 967 1153 966 1159 0.90 # 15750 # 20990 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.658 1_31 - 134 AAA_30 PF13604.1 196 0.0001 15.1 0.0 1 2 0.00022 0.0092 8.8 0.0 25 52 5 32 1 39 0.87 # 38582 # 38983 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.562 1_31 - 134 AAA_30 PF13604.1 196 0.0001 15.1 0.0 2 2 0.0038 0.16 4.7 0.0 11 64 59 112 50 120 0.77 # 38582 # 38983 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.562 4_4 - 237 AAA_30 PF13604.1 196 0.00078 12.3 0.1 1 1 4.1e-05 0.0017 11.1 0.0 17 45 34 62 26 80 0.82 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_29 - 877 FtsK_SpoIIIE PF01580.13 205 0.00015 14.5 0.2 1 1 7.5e-06 0.00047 12.9 0.0 39 63 476 504 459 507 0.85 # 35403 # 38033 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_32 - 62 FtsK_SpoIIIE PF01580.13 205 0.00027 13.7 1.0 1 1 5.5e-06 0.00034 13.3 0.9 38 54 5 21 2 36 0.84 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 3_3 - 553 Lycopene_cycl PF05834.7 374 3.8e-05 15.9 2.8 1 3 0.00072 0.09 4.8 0.2 2 40 3 41 2 42 0.90 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 Lycopene_cycl PF05834.7 374 3.8e-05 15.9 2.8 2 3 0.00085 0.11 4.6 0.1 4 38 155 187 153 192 0.92 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 Lycopene_cycl PF05834.7 374 3.8e-05 15.9 2.8 3 3 0.00049 0.062 5.4 0.0 90 155 194 260 190 263 0.82 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_4 - 237 ABC_tran PF00005.22 137 1.8e-33 109.0 0.0 1 1 3.8e-35 2.4e-33 108.6 0.0 1 137 25 176 25 176 0.92 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_76 - 713 ABC_tran PF00005.22 137 8.5e-08 25.8 0.1 1 2 0.00011 0.0072 9.9 0.0 19 42 29 52 13 171 0.73 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_76 - 713 ABC_tran PF00005.22 137 8.5e-08 25.8 0.1 2 2 1e-05 0.00063 13.3 0.0 79 136 366 453 285 454 0.63 # 73191 # 75329 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 3_3 - 553 K_oxygenase PF13434.1 341 1.7e-05 17.1 0.0 1 1 2.8e-07 3.6e-05 16.0 0.0 107 214 69 174 65 190 0.76 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_62 - 226 Cons_hypoth95 PF03602.10 183 7.1e-06 18.7 0.0 1 2 0.00014 0.018 7.7 0.0 112 168 18 76 2 83 0.69 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 1_62 - 226 Cons_hypoth95 PF03602.10 183 7.1e-06 18.7 0.0 2 2 5e-05 0.0062 9.1 0.0 41 62 162 183 145 213 0.80 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 1_3 - 793 Eco57I PF07669.6 106 4.2e-05 17.1 0.0 1 1 5e-06 0.00063 13.4 0.0 2 103 311 441 310 444 0.76 # 4437 # 6815 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_14 - 731 DAP3 PF10236.4 309 0.00018 13.7 0.0 1 1 2.5e-06 0.00032 12.9 0.0 23 72 185 234 170 244 0.85 # 20990 # 23182 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.576 1_13 - 1747 AAA_19 PF13245.1 76 2.3e-08 27.0 0.1 1 1 3.1e-09 1.3e-07 24.6 0.1 6 75 978 1045 973 1046 0.78 # 15750 # 20990 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.658 4_4 - 237 AAA_19 PF13245.1 76 0.00076 12.5 0.1 1 1 3.9e-05 0.0016 11.4 0.1 9 35 34 59 27 88 0.78 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_32 - 62 AAA_19 PF13245.1 76 0.0011 12.0 0.0 1 1 2.9e-05 0.0012 11.9 0.0 11 37 7 32 3 52 0.80 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_29 - 877 AAA_10 PF12846.2 304 1e-46 152.9 0.0 1 1 5.5e-48 1.7e-46 152.2 0.0 1 294 479 770 479 776 0.88 # 35403 # 38033 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_14 - 731 AAA_10 PF12846.2 304 8.8e-09 28.4 0.0 1 1 4.9e-09 1.5e-07 24.3 0.0 3 296 187 494 186 499 0.72 # 20990 # 23182 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.576 4_4 - 237 AAA_10 PF12846.2 304 4.6e-07 22.7 0.2 1 2 1.4e-05 0.00045 12.9 0.1 6 21 40 55 37 76 0.85 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 AAA_10 PF12846.2 304 4.6e-07 22.7 0.2 2 2 0.0004 0.013 8.2 0.0 218 267 163 212 107 222 0.79 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_32 - 62 AAA_10 PF12846.2 304 0.00041 13.0 0.0 1 1 1.4e-05 0.00044 12.9 0.0 2 27 6 31 5 48 0.85 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 4_4 - 237 SbcCD_C PF13558.1 90 0.0005 13.3 0.1 1 1 0.00013 0.016 8.4 0.1 25 89 140 191 124 192 0.67 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 3_3 - 553 FAD_oxidored PF12831.2 428 0.0011 11.2 4.6 1 2 0.00026 0.033 6.4 2.3 2 28 3 29 2 34 0.90 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 FAD_oxidored PF12831.2 428 0.0011 11.2 4.6 2 2 0.00078 0.098 4.8 0.0 45 120 144 221 138 240 0.68 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 DAO PF01266.19 358 9.9e-11 34.3 11.1 1 4 0.00036 0.045 5.8 0.5 1 33 2 37 2 45 0.89 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 DAO PF01266.19 358 9.9e-11 34.3 11.1 2 4 0.037 4.7 -0.8 0.1 163 201 73 114 67 118 0.88 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 DAO PF01266.19 358 9.9e-11 34.3 11.1 3 4 4.5e-07 5.7e-05 15.3 0.2 5 32 156 183 152 187 0.92 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 DAO PF01266.19 358 9.9e-11 34.3 11.1 4 4 4.6e-08 5.7e-06 18.6 0.1 149 214 193 259 189 457 0.85 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_67 - 743 ThiF PF00899.16 136 1.9e-12 40.4 0.0 1 1 3.6e-14 4.5e-12 39.2 0.0 6 107 371 474 367 490 0.87 # 62381 # 64609 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.445 1_1 - 1014 ResIII PF04851.10 184 7.6e-13 41.9 0.1 1 1 2.9e-14 1.8e-12 40.7 0.1 3 183 293 493 291 494 0.82 # 3 # 3044 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_32 - 62 ResIII PF04851.10 184 5.7e-05 16.2 0.5 1 1 1.2e-06 7.7e-05 15.8 0.3 24 49 4 29 2 41 0.85 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 3_3 - 553 NAD_binding_9 PF13454.1 156 0.00026 14.0 6.4 1 4 0.021 2.6 1.0 0.1 1 33 4 33 4 46 0.82 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 NAD_binding_9 PF13454.1 156 0.00026 14.0 6.4 2 4 0.092 12 -1.1 0.0 114 154 69 113 57 115 0.66 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 NAD_binding_9 PF13454.1 156 0.00026 14.0 6.4 3 4 0.0026 0.32 4.0 0.2 2 32 155 180 154 194 0.81 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 NAD_binding_9 PF13454.1 156 0.00026 14.0 6.4 4 4 4e-05 0.005 9.9 0.1 113 154 204 244 191 246 0.79 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_32 - 62 PduV-EutP PF10662.4 143 0.00077 12.2 0.0 1 1 6.7e-06 0.00084 12.1 0.0 3 20 7 24 5 40 0.83 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_1 - 1014 DEAD PF00270.24 169 1.7e-10 33.9 0.0 1 1 6.5e-12 4.1e-10 32.6 0.0 15 164 316 495 297 500 0.74 # 3 # 3044 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_32 - 62 DEAD PF00270.24 169 5e-05 16.1 0.0 1 1 7.9e-07 5e-05 16.1 0.0 14 35 5 26 1 57 0.77 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 3_3 - 553 Pyr_redox PF00070.22 80 1.2e-18 60.6 7.3 1 3 0.002 0.25 5.1 1.0 1 29 2 30 2 35 0.93 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 Pyr_redox PF00070.22 80 1.2e-18 60.6 7.3 2 3 0.032 4.1 1.2 0.0 51 77 67 92 62 98 0.80 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 553 Pyr_redox PF00070.22 80 1.2e-18 60.6 7.3 3 3 2.2e-19 2.8e-17 56.2 0.2 3 77 154 228 152 231 0.92 # 1900 # 3558 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_14 - 731 TrwB_AAD_bind PF10412.4 386 3.5e-148 486.5 0.0 1 1 1e-149 4.4e-148 486.2 0.0 2 385 172 560 171 561 0.99 # 20990 # 23182 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.576 1_29 - 877 TrwB_AAD_bind PF10412.4 386 1.7e-06 20.1 0.6 1 1 1.1e-07 4.8e-06 18.6 0.1 17 54 481 518 473 556 0.80 # 35403 # 38033 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_32 - 62 TrwB_AAD_bind PF10412.4 386 0.00024 13.0 0.1 1 1 6.2e-06 0.00026 12.9 0.1 14 42 4 32 1 37 0.85 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_13 - 1747 AAA_11 PF13086.1 236 1.2e-06 21.5 0.1 1 1 3e-08 3.8e-06 19.8 0.0 2 72 967 1034 966 1057 0.82 # 15750 # 20990 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.658 1_14 - 731 T4SS-DNA_transf PF02534.9 469 1e-08 27.4 0.0 1 1 5.1e-10 3.2e-08 25.7 0.0 251 371 363 486 198 542 0.78 # 20990 # 23182 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.576 1_29 - 877 T4SS-DNA_transf PF02534.9 469 0.00064 11.5 0.1 1 2 0.0072 0.45 2.1 0.0 105 181 533 605 470 686 0.79 # 35403 # 38033 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_29 - 877 T4SS-DNA_transf PF02534.9 469 0.00064 11.5 0.1 2 2 0.00026 0.016 6.9 0.2 321 378 715 771 703 773 0.94 # 35403 # 38033 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_62 - 226 MethyltransfD12 PF02086.10 260 0.00028 13.6 0.0 1 2 0.011 1.3 1.5 0.0 175 188 18 31 10 85 0.82 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 1_62 - 226 MethyltransfD12 PF02086.10 260 0.00028 13.6 0.0 2 2 2.8e-05 0.0035 10.0 0.0 20 46 163 189 148 197 0.79 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 4_4 - 237 ArgK PF03308.11 267 0.00018 13.5 0.1 1 1 2.2e-06 0.00028 12.9 0.1 19 53 25 59 11 68 0.82 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_29 - 877 Pox_A32 PF04665.7 241 0.00023 13.7 0.2 1 1 1.6e-05 0.00099 11.6 0.0 11 39 477 505 470 520 0.85 # 35403 # 38033 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_32 - 62 Pox_A32 PF04665.7 241 0.00056 12.5 0.1 1 1 9.7e-06 0.00061 12.3 0.1 13 38 5 30 1 35 0.85 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_32 - 62 RNA_helicase PF00910.17 107 0.00093 12.6 0.0 1 1 8e-06 0.001 12.5 0.0 1 28 8 35 8 60 0.74 # 38967 # 39152 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 4_4 - 237 UPF0079 PF02367.12 123 0.00058 12.8 0.0 1 1 9.5e-06 0.0012 11.7 0.0 10 39 30 59 22 67 0.85 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_1 - 1014 UvrD-helicase PF00580.16 315 0.00082 11.9 3.9 1 2 4.4e-06 0.00055 12.5 1.3 12 263 314 586 305 636 0.65 # 3 # 3044 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_1 - 1014 UvrD-helicase PF00580.16 315 0.00082 11.9 3.9 2 2 0.092 12 -1.7 0.1 119 164 924 964 879 999 0.56 # 3 # 3044 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.590 4_4 - 237 NACHT PF05729.7 166 0.0018 11.2 0.3 1 1 3.2e-05 0.004 10.0 0.2 2 19 37 54 36 59 0.87 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 AAA_25 PF13481.1 194 1.9e-08 27.1 0.1 1 2 4.4e-08 5.6e-06 19.1 0.0 16 61 19 65 8 86 0.74 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_4 - 237 AAA_25 PF13481.1 194 1.9e-08 27.1 0.1 2 2 0.00048 0.06 5.9 0.0 161 188 180 206 172 209 0.85 # 3070 # 3780 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_62 - 226 Methyltransf_15 PF09445.5 164 0.00086 12.1 0.1 1 2 0.019 2.4 0.9 0.0 53 79 4 29 2 34 0.92 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 1_62 - 226 Methyltransf_15 PF09445.5 164 0.00086 12.1 0.1 2 2 7.1e-05 0.0089 8.8 0.0 3 31 166 194 164 207 0.86 # 58563 # 59240 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/33b330d2-c8e6-43f0-9aa4-18504ed1ee61 # Target file: checkm_output/bins/pm67/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm67/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/33b330d2-c8e6-43f0-9aa4-18504ed1ee61 checkm_output/bins/pm67/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:08:28 2020 # [ok]