# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 332 cobW PF02492.14 178 2.1e-06 20.1 0.0 1 1 4.1e-08 3.9e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 Parvo_NS1 PF01057.12 272 0.00081 11.1 0.0 1 1 1.4e-05 0.0014 10.4 0.0 104 138 148 182 140 188 0.90 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_25 - 1079 Torsin PF06309.6 127 2.1e-05 17.3 0.0 1 1 6.4e-07 6.1e-05 15.8 0.0 19 85 460 526 452 537 0.83 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_6 - 260 IstB_IS21 PF01695.12 178 8.2e-66 213.6 0.0 1 1 4.4e-67 2.1e-65 212.3 0.0 2 177 56 233 55 234 0.96 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 IstB_IS21 PF01695.12 178 2.6e-05 16.5 0.0 1 1 8.9e-07 4.2e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_10 - 238 3HCDH_N PF02737.13 180 0.0013 11.3 1.9 1 2 0.00064 0.031 6.8 0.1 68 118 33 83 18 86 0.84 # 6869 # 7582 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.513 1_10 - 238 3HCDH_N PF02737.13 180 0.0013 11.3 1.9 2 2 0.0045 0.21 4.0 0.2 41 80 143 180 111 210 0.68 # 6869 # 7582 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.513 4_6 - 561 3HCDH_N PF02737.13 180 0.0043 9.5 6.7 1 2 0.0081 0.38 3.2 2.8 1 30 99 128 99 134 0.93 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 3HCDH_N PF02737.13 180 0.0043 9.5 6.7 2 2 0.0003 0.014 7.8 0.1 2 37 272 307 271 358 0.71 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 GIDA PF01134.17 392 5.4e-09 28.1 0.7 1 3 5.7e-11 5.4e-09 28.1 0.7 2 189 100 281 99 302 0.73 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 GIDA PF01134.17 392 5.4e-09 28.1 0.7 2 3 0.072 6.8 -1.8 0.0 140 174 338 369 313 382 0.69 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 GIDA PF01134.17 392 5.4e-09 28.1 0.7 3 3 0.034 3.2 -0.8 0.0 350 384 390 424 383 427 0.75 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 2_25 - 1079 UvrD_C_2 PF13538.1 104 2.4e-16 52.6 0.1 1 1 1e-17 9.9e-16 50.7 0.1 2 102 797 896 796 898 0.76 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 4_6 - 561 Pyr_redox_2 PF07992.9 201 3.9e-41 134.0 0.5 1 1 7.6e-43 7.2e-41 133.1 0.5 2 199 100 406 99 408 0.95 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_4 - 332 AAA_2 PF07724.9 171 5.5e-06 19.2 0.0 1 1 1e-07 9.7e-06 18.4 0.0 3 54 158 204 156 216 0.89 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_24 - 510 DUF87 PF01935.12 229 1e-07 24.8 0.0 1 1 3.4e-09 1.6e-07 24.2 0.0 10 68 116 170 109 262 0.85 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_4 - 332 DUF87 PF01935.12 229 2.5e-06 20.3 0.0 1 1 9.7e-08 4.6e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 AAA_22 PF13401.1 131 2.6e-07 23.7 0.0 1 1 1.8e-08 5.8e-07 22.6 0.0 3 54 157 202 153 241 0.74 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_6 - 260 AAA_22 PF13401.1 131 1.2e-06 21.6 0.0 1 2 1.2e-05 0.00039 13.4 0.1 4 28 101 125 98 148 0.75 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_6 - 260 AAA_22 PF13401.1 131 1.2e-06 21.6 0.0 2 2 0.0025 0.078 6.0 0.0 77 101 151 178 124 201 0.64 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_25 - 1079 AAA_22 PF13401.1 131 0.00061 12.8 0.2 1 1 0.00022 0.007 9.4 0.2 4 125 494 598 490 603 0.81 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_23 - 478 DNA_methylase PF00145.12 335 2.1e-79 259.8 0.0 1 1 4.4e-81 4.2e-79 258.8 0.0 1 331 96 457 96 460 0.86 # 14616 # 16049 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.482 4_6 - 561 NAD_binding_7 PF13241.1 103 4.4e-07 23.0 1.1 1 2 8.9e-06 0.00085 12.5 0.1 6 39 96 129 94 185 0.88 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 NAD_binding_7 PF13241.1 103 4.4e-07 23.0 1.1 2 2 0.00012 0.011 8.8 0.1 8 41 270 306 263 381 0.74 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 3_6 - 260 AAA_17 PF13207.1 121 0.00037 14.2 0.0 1 1 2e-05 0.00062 13.4 0.0 2 26 104 131 103 216 0.74 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 AAA_17 PF13207.1 121 0.00038 14.1 0.1 1 1 2.8e-05 0.0009 12.9 0.1 2 40 161 195 160 229 0.75 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_24 - 510 AAA_17 PF13207.1 121 0.00052 13.7 0.1 1 1 6.7e-05 0.0021 11.7 0.0 4 42 131 191 129 260 0.58 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_4 - 332 MobB PF03205.9 140 8.4e-06 18.4 1.9 1 1 1.5e-07 1.4e-05 17.6 0.3 2 39 160 196 159 201 0.83 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_25 - 1079 PhoH PF02562.11 205 2.9e-09 29.3 4.5 1 2 1.6e-06 5.2e-05 15.4 0.3 6 39 479 514 475 536 0.78 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_25 - 1079 PhoH PF02562.11 205 2.9e-09 29.3 4.5 2 2 4.5e-06 0.00014 13.9 0.1 120 162 562 605 553 635 0.82 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_6 - 260 PhoH PF02562.11 205 3e-07 22.7 0.1 1 1 1.5e-08 4.7e-07 22.0 0.1 14 56 96 138 84 163 0.80 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 PhoH PF02562.11 205 0.00029 12.9 0.0 1 1 1.7e-05 0.00053 12.1 0.0 14 45 153 184 143 210 0.79 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 AAA_7 PF12775.2 272 9.4e-05 14.4 0.0 1 1 2.3e-06 0.00022 13.2 0.0 25 64 150 189 139 209 0.86 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_6 - 260 AFG1_ATPase PF03969.11 362 0.00029 12.5 0.0 1 1 5.8e-06 0.00055 11.6 0.0 64 214 103 251 81 258 0.78 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 T2SE PF00437.15 272 3e-52 170.0 0.1 1 1 7.4e-54 3.5e-52 169.7 0.1 3 271 10 311 8 312 0.94 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_24 - 510 T2SE PF00437.15 272 0.00083 11.1 0.1 1 1 3.1e-05 0.0015 10.3 0.1 130 149 128 147 103 160 0.84 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_4 - 332 Zeta_toxin PF06414.7 201 1.5e-06 20.3 0.0 1 1 2.7e-08 2.5e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_6 - 561 NAD_binding_8 PF13450.1 68 7.3e-05 15.6 1.0 1 2 7.6e-07 7.3e-05 15.6 1.0 1 35 102 135 102 155 0.90 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 NAD_binding_8 PF13450.1 68 7.3e-05 15.6 1.0 2 2 0.077 7.3 -0.4 0.1 1 25 274 298 274 302 0.79 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 F420_oxidored PF03807.12 96 0.0092 9.3 4.6 1 2 0.002 0.19 5.1 1.0 2 34 100 128 99 131 0.88 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 F420_oxidored PF03807.12 96 0.0092 9.3 4.6 2 2 0.0049 0.46 3.9 0.0 1 35 271 301 271 337 0.87 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_4 - 332 Arch_ATPase PF01637.13 234 8.3e-06 18.4 0.0 1 1 1.6e-07 1.5e-05 17.6 0.0 15 68 155 205 149 226 0.87 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 AAA_16 PF13191.1 185 6.4e-07 22.3 0.0 1 1 3.4e-08 1.6e-06 21.0 0.0 24 61 158 195 149 274 0.82 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_6 - 260 AAA_16 PF13191.1 185 1.4e-05 18.0 2.4 1 2 2.4e-06 0.00011 15.0 0.1 23 51 100 128 86 149 0.80 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_6 - 260 AAA_16 PF13191.1 185 1.4e-05 18.0 2.4 2 2 0.071 3.4 0.4 0.0 124 162 143 175 125 192 0.74 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 AAA_23 PF13476.1 202 0.00042 13.5 0.0 1 1 1.4e-05 0.00068 12.8 0.0 19 39 158 178 105 184 0.91 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_10 - 238 AAA_23 PF13476.1 202 0.071 6.2 13.9 1 1 0.00018 0.0087 9.2 1.7 97 196 67 185 58 218 0.59 # 6869 # 7582 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.513 1_4 - 332 AAA_18 PF13238.1 129 4.5e-06 19.9 0.0 1 1 2e-07 9.3e-06 18.8 0.0 1 29 161 194 161 213 0.77 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_24 - 510 AAA_18 PF13238.1 129 0.00012 15.2 0.0 1 1 5.2e-06 0.00025 14.2 0.0 3 21 131 149 130 238 0.78 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_21 - 239 CbiA PF01656.18 195 4e-06 19.2 0.6 1 2 0.00081 0.038 6.2 0.1 1 19 3 21 3 25 0.89 # 12217 # 12933 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.418 2_21 - 239 CbiA PF01656.18 195 4e-06 19.2 0.6 2 2 1.8e-05 0.00087 11.5 0.0 109 165 81 142 29 173 0.76 # 12217 # 12933 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.418 3_6 - 260 CbiA PF01656.18 195 0.00092 11.5 0.0 1 1 2.5e-05 0.0012 11.1 0.0 3 42 105 145 104 254 0.75 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 KaiC PF06745.8 227 0.00016 13.6 0.0 1 1 3e-06 0.00029 12.8 0.0 16 53 155 190 148 240 0.77 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_6 - 260 AAA_14 PF13173.1 128 3.4e-07 23.1 0.0 1 1 5.1e-08 1.6e-06 20.9 0.0 3 97 102 203 100 219 0.64 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_24 - 510 AAA_14 PF13173.1 128 1.2e-05 18.1 0.0 1 2 6.5e-06 0.0002 14.1 0.0 6 89 130 213 125 234 0.76 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_24 - 510 AAA_14 PF13173.1 128 1.2e-05 18.1 0.0 2 2 0.065 2.1 1.1 0.0 53 81 340 372 300 391 0.57 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_4 - 332 AAA_14 PF13173.1 128 0.00026 13.7 0.1 1 2 0.0067 0.21 4.3 0.0 64 96 135 165 98 166 0.69 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 AAA_14 PF13173.1 128 0.00026 13.7 0.1 2 2 9.5e-05 0.003 10.3 0.0 2 35 158 191 157 213 0.80 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 GvpD PF07088.6 484 2.4e-06 18.9 0.0 1 1 3.9e-08 3.7e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_6 - 561 HI0933_like PF03486.9 409 1.4e-07 23.0 4.3 1 2 1.6e-06 0.00015 13.1 2.7 2 33 99 130 98 138 0.91 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 HI0933_like PF03486.9 409 1.4e-07 23.0 4.3 2 2 2.7e-05 0.0026 9.0 0.0 84 164 286 362 280 382 0.84 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_4 - 332 AAA_29 PF13555.1 62 0.00095 11.6 0.0 1 1 2.3e-05 0.0022 10.4 0.0 19 43 157 178 145 188 0.75 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_6 - 561 FAD_binding_2 PF00890.19 417 2.5e-06 19.3 4.9 1 3 2.6e-08 2.5e-06 19.3 4.9 2 32 100 130 99 137 0.91 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 FAD_binding_2 PF00890.19 417 2.5e-06 19.3 4.9 2 3 0.022 2.1 -0.2 0.4 145 209 313 372 303 385 0.69 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 FAD_binding_2 PF00890.19 417 2.5e-06 19.3 4.9 3 3 0.037 3.5 -0.9 0.1 374 402 374 404 366 418 0.80 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 3_6 - 260 AAA PF00004.24 132 2e-08 27.3 0.0 1 1 8.2e-10 3.9e-08 26.4 0.0 1 70 104 175 104 207 0.82 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_25 - 1079 AAA PF00004.24 132 3.1e-06 20.2 0.9 1 1 2.6e-07 1.2e-05 18.3 0.1 4 111 500 600 497 612 0.73 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_6 - 260 Bac_DnaA PF00308.13 219 4.9e-09 28.9 0.0 1 1 7.8e-11 7.4e-09 28.4 0.0 36 136 103 201 90 209 0.84 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 Sigma54_activat PF00158.21 168 8.1e-06 18.2 0.0 1 1 3.1e-07 1.5e-05 17.4 0.0 14 54 150 190 138 213 0.82 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_25 - 1079 Sigma54_activat PF00158.21 168 0.00016 14.0 0.4 1 1 9.4e-06 0.00045 12.6 0.4 7 130 479 600 473 606 0.80 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 4_6 - 561 Pyr_redox_3 PF13738.1 203 5.8e-18 58.5 0.1 1 2 2.3e-14 2.2e-12 40.3 0.0 1 201 101 303 101 305 0.73 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 Pyr_redox_3 PF13738.1 203 5.8e-18 58.5 0.1 2 2 7.5e-07 7.1e-05 15.7 0.0 89 147 316 371 308 429 0.82 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_4 - 332 MMR_HSR1 PF01926.18 116 0.00041 13.2 0.0 1 1 7.1e-06 0.00067 12.5 0.0 2 41 161 205 160 310 0.84 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 DUF258 PF03193.11 161 0.00011 14.3 0.0 1 1 4.1e-06 0.00019 13.5 0.0 29 61 151 184 129 224 0.81 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_6 - 260 DUF258 PF03193.11 161 0.0002 13.4 0.0 1 1 7.3e-06 0.00035 12.6 0.0 26 59 92 125 80 153 0.82 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_24 - 510 TraG-D_C PF12696.2 128 1.3e-21 69.7 0.0 1 1 2.2e-23 2.1e-21 69.0 0.0 1 127 350 471 350 472 0.80 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 3_6 - 260 NTPase_1 PF03266.10 168 0.00022 13.8 0.1 1 2 0.0015 0.14 4.6 0.1 2 30 104 132 103 143 0.82 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_6 - 260 NTPase_1 PF03266.10 168 0.00022 13.8 0.1 2 2 0.0003 0.028 6.9 0.0 87 108 155 176 141 202 0.77 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 AAA_33 PF13671.1 143 0.00035 13.3 0.0 1 1 5.9e-06 0.00056 12.6 0.0 2 26 161 188 160 256 0.81 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_25 - 1079 AAA_30 PF13604.1 196 2.2e-53 173.6 7.3 1 1 1.7e-54 8e-53 171.7 6.1 1 192 477 660 477 663 0.97 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_4 - 332 AAA_30 PF13604.1 196 0.00014 14.3 0.1 1 2 4.7e-05 0.0022 10.4 0.1 11 51 151 190 145 197 0.80 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 AAA_30 PF13604.1 196 0.00014 14.3 0.1 2 2 0.024 1.1 1.6 0.0 121 178 204 258 191 272 0.77 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 FtsK_SpoIIIE PF01580.13 205 8.2e-07 21.5 0.0 1 1 5.1e-08 1.6e-06 20.5 0.0 38 64 158 184 139 191 0.81 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_11 - 867 FtsK_SpoIIIE PF01580.13 205 0.00046 12.5 0.0 1 1 3.4e-05 0.0011 11.3 0.0 21 62 462 515 445 522 0.82 # 7600 # 10200 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_24 - 510 FtsK_SpoIIIE PF01580.13 205 0.00062 12.1 0.0 1 1 3.4e-05 0.0011 11.3 0.0 39 59 124 147 95 153 0.78 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 4_6 - 561 ELFV_dehydrog PF00208.16 244 0.0017 10.8 2.5 1 2 0.0001 0.0095 8.3 1.3 30 66 95 129 88 146 0.87 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 ELFV_dehydrog PF00208.16 244 0.0017 10.8 2.5 2 2 0.017 1.7 1.0 0.0 33 106 270 340 259 362 0.71 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_4 - 332 ABC_tran PF00005.22 137 1.5e-06 21.4 0.0 1 1 5e-08 2.4e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_6 - 260 ABC_tran PF00005.22 137 0.0005 13.2 0.2 1 1 4.1e-05 0.0019 11.3 0.1 8 31 98 121 95 132 0.86 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 4_6 - 561 K_oxygenase PF13434.1 341 8.5e-06 17.7 0.1 1 2 0.01 0.97 1.0 0.2 189 219 96 124 89 130 0.74 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 K_oxygenase PF13434.1 341 8.5e-06 17.7 0.1 2 2 1.7e-06 0.00016 13.5 0.0 130 231 216 308 199 336 0.81 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_4 - 332 ATP-synt_ab PF00006.20 215 0.00052 12.4 0.0 1 1 8.8e-06 0.00083 11.7 0.0 16 62 159 205 151 247 0.86 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 AAA_19 PF13245.1 76 0.00061 12.4 0.1 1 1 4.2e-05 0.0013 11.3 0.1 5 48 153 191 149 224 0.78 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_6 - 260 AAA_19 PF13245.1 76 0.00064 12.3 0.2 1 1 7.9e-05 0.0025 10.5 0.0 11 35 103 126 95 157 0.81 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_25 - 1079 AAA_19 PF13245.1 76 0.0022 10.6 3.7 1 2 0.00084 0.027 7.2 0.2 2 75 485 551 484 552 0.75 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_25 - 1079 AAA_19 PF13245.1 76 0.0022 10.6 3.7 2 2 0.041 1.3 1.7 0.0 17 32 706 721 705 731 0.82 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_25 - 1079 Helicase_RecD PF05127.9 177 1.9e-05 17.2 4.8 1 2 0.00059 0.056 5.9 0.1 122 146 498 522 481 539 0.76 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_25 - 1079 Helicase_RecD PF05127.9 177 1.9e-05 17.2 4.8 2 2 8.1e-06 0.00077 12.0 0.1 75 114 548 585 529 653 0.69 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_11 - 867 AAA_10 PF12846.2 304 1.5e-33 109.3 0.1 1 1 2.1e-34 5e-33 107.6 0.0 2 292 492 772 491 780 0.84 # 7600 # 10200 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_24 - 510 AAA_10 PF12846.2 304 5.1e-07 22.2 0.1 1 2 2.8e-05 0.00065 12.0 0.1 3 41 128 166 126 177 0.92 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_24 - 510 AAA_10 PF12846.2 304 5.1e-07 22.2 0.1 2 2 0.00045 0.011 8.0 0.0 214 286 339 414 307 431 0.75 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 3_6 - 260 AAA_10 PF12846.2 304 3.5e-05 16.1 0.2 1 2 0.058 1.4 1.1 0.0 106 155 28 69 4 89 0.61 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_6 - 260 AAA_10 PF12846.2 304 3.5e-05 16.1 0.2 2 2 1.8e-05 0.00042 12.6 0.1 3 35 103 135 101 172 0.84 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 AAA_10 PF12846.2 304 0.00025 13.3 0.0 1 1 1.6e-05 0.00039 12.7 0.0 3 29 160 185 158 233 0.81 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_6 - 561 FAD_oxidored PF12831.2 428 2.7e-06 19.5 3.1 1 1 2.8e-08 2.7e-06 19.5 3.1 2 41 100 138 99 168 0.84 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 DAO PF01266.19 358 1.7e-11 36.4 8.9 1 3 9.2e-09 8.7e-07 20.9 0.5 1 38 99 134 99 189 0.87 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 DAO PF01266.19 358 1.7e-11 36.4 8.9 2 3 0.076 7.3 -1.9 0.0 3 31 273 301 271 305 0.73 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 DAO PF01266.19 358 1.7e-11 36.4 8.9 3 3 2.4e-08 2.3e-06 19.5 0.2 152 200 314 361 305 373 0.92 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_4 - 332 ResIII PF04851.10 184 5.9e-06 19.0 0.0 1 1 9.8e-08 9.3e-06 18.4 0.0 22 61 148 196 104 202 0.81 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_25 - 1079 Viral_helicase1 PF01443.13 234 6.5e-15 48.1 5.4 1 2 2.3e-08 2.2e-06 20.2 0.0 3 104 499 605 497 654 0.74 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_25 - 1079 Viral_helicase1 PF01443.13 234 6.5e-15 48.1 5.4 2 2 3e-11 2.9e-09 29.6 0.5 157 234 818 899 774 899 0.74 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_4 - 332 DUF2075 PF09848.4 352 8.6e-05 14.4 0.0 1 1 1.3e-06 0.00012 13.9 0.0 1 32 158 187 158 216 0.76 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 DEAD PF00270.24 169 2.8e-06 19.7 0.0 1 1 5.7e-08 5.4e-06 18.8 0.0 13 70 157 211 144 242 0.78 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_6 - 561 Pyr_redox PF00070.22 80 9.1e-20 63.8 5.3 1 2 2.7e-06 0.00026 14.2 1.6 1 31 99 129 99 131 0.96 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 Pyr_redox PF00070.22 80 9.1e-20 63.8 5.3 2 2 1.7e-17 1.6e-15 50.2 0.1 1 72 271 340 271 350 0.91 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 2_24 - 510 TrwB_AAD_bind PF10412.4 386 1e-118 389.1 0.0 1 1 3.7e-120 1.2e-118 388.9 0.0 1 385 112 490 112 491 0.95 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_11 - 867 TrwB_AAD_bind PF10412.4 386 1.2e-05 16.8 1.1 1 2 2.9e-05 0.00091 10.7 0.0 16 51 492 527 484 536 0.92 # 7600 # 10200 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_11 - 867 TrwB_AAD_bind PF10412.4 386 1.2e-05 16.8 1.1 2 2 0.0042 0.13 3.5 0.0 102 168 741 806 720 812 0.79 # 7600 # 10200 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_4 - 332 TrwB_AAD_bind PF10412.4 386 1.3e-05 16.8 0.1 1 1 6.4e-07 2e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 Sigma54_activ_2 PF14532.1 138 2.3e-06 20.6 0.0 1 1 1e-07 4.8e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_6 - 260 Sigma54_activ_2 PF14532.1 138 0.00038 13.4 0.0 1 1 1.3e-05 0.0006 12.7 0.0 9 64 87 144 84 229 0.70 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_24 - 510 T4SS-DNA_transf PF02534.9 469 5.1e-12 37.8 0.0 1 1 7.9e-14 7.5e-12 37.3 0.0 263 426 313 472 297 500 0.74 # 14270 # 15799 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 4_8 - 92 RRM_3 PF08777.6 105 0.00059 12.5 0.0 1 1 8.1e-06 0.00077 12.2 0.0 4 61 26 80 24 88 0.80 # 6830 # 7105 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.605 1_4 - 332 Pox_A32 PF04665.7 241 9.5e-05 14.6 0.0 1 1 1.7e-06 0.00016 13.8 0.0 12 46 157 191 150 210 0.85 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_25 - 1079 PIF1 PF05970.9 364 2.2e-06 19.6 0.1 1 2 1.6e-07 1.5e-05 16.9 0.0 2 65 478 537 477 588 0.85 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_25 - 1079 PIF1 PF05970.9 364 2.2e-06 19.6 0.1 2 2 0.087 8.3 -2.0 0.0 334 363 795 823 782 824 0.84 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_4 - 332 GTP_EFTU PF00009.22 188 0.00021 13.6 0.2 1 1 3.5e-06 0.00033 12.9 0.2 2 32 157 187 156 205 0.83 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 RNA_helicase PF00910.17 107 1.9e-05 17.7 0.1 1 2 3.5e-06 0.00033 13.7 0.0 1 25 161 185 161 242 0.75 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 RNA_helicase PF00910.17 107 1.9e-05 17.7 0.1 2 2 0.027 2.6 1.2 0.1 69 100 290 322 281 328 0.78 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 UPF0079 PF02367.12 123 5.8e-06 18.8 0.0 1 1 1.2e-07 1.2e-05 17.8 0.0 9 45 152 188 145 193 0.85 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_6 - 561 AlaDh_PNT_C PF01262.16 168 0.0018 10.7 5.1 1 2 0.002 0.19 4.1 1.7 21 50 98 127 88 130 0.89 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_6 - 561 AlaDh_PNT_C PF01262.16 168 0.0018 10.7 5.1 2 2 0.0002 0.019 7.3 0.1 19 67 268 316 259 342 0.76 # 4674 # 6356 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 3_6 - 260 AAA_24 PF13479.1 213 0.0013 11.2 0.1 1 1 3e-05 0.0029 10.0 0.1 5 23 103 121 99 127 0.85 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_4 - 332 Myosin_head PF00063.16 689 0.00015 12.7 0.0 1 1 2.2e-06 0.00021 12.2 0.0 84 110 157 183 147 209 0.90 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_4 - 332 NACHT PF05729.7 166 8.4e-05 15.1 0.0 1 1 3.8e-06 0.00018 14.0 0.0 1 27 159 185 159 188 0.90 # 1569 # 2564 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_6 - 260 NACHT PF05729.7 166 0.00012 14.6 0.0 1 1 4.1e-06 0.0002 13.9 0.0 3 49 104 151 102 200 0.81 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_6 - 260 AAA_25 PF13481.1 194 6.8e-07 21.7 0.1 1 1 2.2e-08 2.1e-06 20.1 0.1 9 60 72 128 68 201 0.77 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_6 - 260 AAA_28 PF13521.1 163 0.00024 13.9 0.0 1 1 5e-06 0.00047 13.0 0.0 1 49 103 156 103 171 0.73 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_25 - 1079 Herpes_Helicase PF02689.9 819 1.9e-05 15.4 0.0 1 2 0.0014 0.13 2.7 0.0 173 208 539 574 515 584 0.81 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_25 - 1079 Herpes_Helicase PF02689.9 819 1.9e-05 15.4 0.0 2 2 9.3e-06 0.00088 9.9 0.0 739 782 850 894 831 914 0.80 # 15799 # 19035 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_6 - 260 AAA_5 PF07728.9 139 1.7e-05 17.4 0.0 1 1 4.6e-07 4.3e-05 16.1 0.0 1 74 103 172 103 177 0.80 # 7464 # 8243 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/0522d2bd-4c5c-4cd7-913f-823ae1f32ca9 # Target file: checkm_output/bins/pm665/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm665/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/0522d2bd-4c5c-4cd7-913f-823ae1f32ca9 checkm_output/bins/pm665/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:08:25 2020 # [ok]