# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_30 - 372 ATP_bind_3 PF01171.15 182 0.00032 14.2 0.0 1 2 5.2e-05 0.011 9.2 0.0 1 59 52 110 52 129 0.78 # 26702 # 27817 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 2_30 - 372 ATP_bind_3 PF01171.15 182 0.00032 14.2 0.0 2 2 0.005 1.1 2.7 0.0 134 161 232 260 207 262 0.72 # 26702 # 27817 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 3_22 - 290 RrnaAD PF00398.15 262 3.9e-56 183.9 2.4 1 1 2.1e-58 4.5e-56 183.7 2.4 4 261 3 253 1 254 0.97 # 11530 # 12399 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.284 2_11 - 347 Seryl_tRNA_N PF02403.17 108 0.056 7.5 46.3 1 5 0.019 4.1 1.5 8.8 39 98 89 152 77 158 0.72 # 8876 # 9916 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_11 - 347 Seryl_tRNA_N PF02403.17 108 0.056 7.5 46.3 2 5 0.00084 0.18 5.9 3.1 50 100 146 196 143 199 0.89 # 8876 # 9916 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_11 - 347 Seryl_tRNA_N PF02403.17 108 0.056 7.5 46.3 3 5 2.6e-06 0.00056 13.9 12.2 19 100 216 294 201 297 0.85 # 8876 # 9916 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_11 - 347 Seryl_tRNA_N PF02403.17 108 0.056 7.5 46.3 4 5 0.00031 0.066 7.3 2.1 62 105 284 327 282 330 0.90 # 8876 # 9916 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_11 - 347 Seryl_tRNA_N PF02403.17 108 0.056 7.5 46.3 5 5 0.0059 1.3 3.1 1.6 82 105 304 327 296 345 0.51 # 8876 # 9916 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_19 - 262 MipZ PF09140.6 261 3.9e-10 33.2 0.0 1 2 6.6e-10 1.4e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 9307 # 10092 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_19 - 262 MipZ PF09140.6 261 3.9e-10 33.2 0.0 2 2 0.00031 0.068 6.2 0.0 89 122 117 150 89 166 0.74 # 9307 # 10092 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 6_4 - 562 3HCDH_N PF02737.13 180 0.0069 10.0 6.9 1 2 0.0025 0.53 3.9 2.5 1 30 100 129 100 133 0.93 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 3HCDH_N PF02737.13 180 0.0069 10.0 6.9 2 2 0.00013 0.028 8.0 0.1 2 38 273 309 272 358 0.73 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 GIDA PF01134.17 392 4.4e-06 19.7 2.9 1 4 2.1e-08 4.4e-06 19.7 2.9 1 52 100 153 100 166 0.88 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 GIDA PF01134.17 392 4.4e-06 19.7 2.9 2 4 0.071 15 -1.8 0.0 3 27 274 298 180 308 0.61 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 GIDA PF01134.17 392 4.4e-06 19.7 2.9 3 4 0.06 13 -1.6 0.0 128 168 339 364 314 382 0.57 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 GIDA PF01134.17 392 4.4e-06 19.7 2.9 4 4 0.0085 1.8 1.2 0.1 349 385 390 426 376 430 0.79 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_37 - 176 SSB PF00436.20 104 2.6e-41 133.7 0.3 1 1 1.5e-43 3.3e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 37353 # 37880 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.545 3_22 - 290 Methyltransf_18 PF12847.2 112 5.3e-06 21.0 0.0 1 1 4.4e-08 9.4e-06 20.2 0.0 1 67 29 91 29 147 0.80 # 11530 # 12399 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.284 2_13 - 504 UvrD_C_2 PF13538.1 104 1.6e-10 35.0 0.0 1 1 3.5e-12 7.5e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 6_4 - 562 Pyr_redox_2 PF07992.9 201 1.1e-41 136.9 0.0 1 1 1.7e-43 3.7e-41 135.2 0.0 1 199 100 407 100 409 0.96 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_6 - 622 DUF87 PF01935.12 229 1.6e-08 28.6 0.1 1 1 3.3e-10 3.6e-08 27.5 0.1 24 63 173 211 168 379 0.87 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_22 - 816 DUF87 PF01935.12 229 5.8e-08 26.8 0.2 1 1 1.1e-09 1.2e-07 25.7 0.2 24 167 452 591 432 654 0.69 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_13 - 504 AAA_22 PF13401.1 131 7e-05 17.0 0.0 1 2 8e-05 0.0058 10.8 0.0 8 68 23 92 17 122 0.63 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_13 - 504 AAA_22 PF13401.1 131 7e-05 17.0 0.0 2 2 0.015 1.1 3.4 0.0 82 124 189 225 164 229 0.77 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_35 - 323 AAA_22 PF13401.1 131 0.00026 15.1 0.0 1 1 7.8e-06 0.00056 14.1 0.0 5 54 62 103 56 164 0.76 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_6 - 622 AAA_22 PF13401.1 131 0.00027 15.1 0.0 1 1 1.2e-05 0.00089 13.4 0.0 3 68 171 231 166 287 0.83 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_22 - 290 Methyltransf_PK PF05891.7 218 0.00051 13.3 0.1 1 2 8e-06 0.0017 11.6 0.1 34 82 4 56 1 77 0.71 # 11530 # 12399 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.284 3_22 - 290 Methyltransf_PK PF05891.7 218 0.00051 13.3 0.1 2 2 0.068 15 -1.2 0.0 184 212 66 95 59 97 0.80 # 11530 # 12399 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.284 3_22 - 290 Methyltransf_11 PF08241.7 95 1.9e-05 19.1 0.0 1 1 2.1e-07 4.4e-05 17.9 0.0 2 63 35 95 34 114 0.92 # 11530 # 12399 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.284 1_54 - 542 DNA_methylase PF00145.12 335 1.3e-28 94.0 0.0 1 1 6.3e-30 6.8e-28 91.7 0.0 3 333 126 441 124 443 0.77 # 49273 # 50898 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 3_8 - 476 DNA_methylase PF00145.12 335 2.2e-10 34.1 0.0 1 2 4.1e-11 4.4e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 2503 # 3930 # -1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 3_8 - 476 DNA_methylase PF00145.12 335 2.2e-10 34.1 0.0 2 2 0.011 1.2 2.1 0.0 290 330 407 448 343 452 0.74 # 2503 # 3930 # -1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_35 - 323 AAA_3 PF07726.6 131 0.00015 15.4 0.0 1 1 1.1e-06 0.00024 14.7 0.0 3 114 65 188 63 212 0.80 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 6_4 - 562 NAD_binding_7 PF13241.1 103 1.7e-05 19.0 2.3 1 2 6.2e-05 0.013 9.7 0.1 9 38 100 129 97 164 0.90 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 NAD_binding_7 PF13241.1 103 1.7e-05 19.0 2.3 2 2 0.00021 0.045 8.0 0.1 8 45 271 314 264 383 0.67 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_45 - 295 N6_N4_Mtase PF01555.13 231 8.6e-09 29.2 0.1 1 2 1.7e-06 0.00037 14.0 0.0 180 223 28 72 4 76 0.84 # 45261 # 46145 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_45 - 295 N6_N4_Mtase PF01555.13 231 8.6e-09 29.2 0.1 2 2 3.5e-06 0.00076 13.0 0.1 2 172 90 267 89 283 0.72 # 45261 # 46145 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_35 - 323 AAA_17 PF13207.1 121 5.4e-05 18.0 0.0 1 1 5.5e-07 0.00012 16.9 0.0 3 27 65 89 64 166 0.90 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_6 - 622 MobB PF03205.9 140 0.0012 12.6 0.0 1 1 1.7e-05 0.0037 10.9 0.0 4 34 176 206 175 214 0.90 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_19 - 262 ArsA_ATPase PF02374.10 305 1.2e-05 18.4 0.0 1 2 3e-07 6.5e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 9307 # 10092 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_19 - 262 ArsA_ATPase PF02374.10 305 1.2e-05 18.4 0.0 2 2 0.029 6.2 -0.3 0.0 124 136 124 136 106 143 0.79 # 9307 # 10092 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_13 - 504 PhoH PF02562.11 205 5.5e-06 19.7 0.2 1 2 0.0013 0.28 4.3 0.0 22 45 22 45 4 61 0.78 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_13 - 504 PhoH PF02562.11 205 5.5e-06 19.7 0.2 2 2 7.5e-06 0.0016 11.7 0.0 122 168 196 240 193 255 0.83 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_35 - 323 T2SE PF00437.15 272 7.6e-05 15.7 0.0 1 1 1.6e-06 0.00018 14.5 0.0 105 148 40 81 9 100 0.77 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_6 - 622 T2SE PF00437.15 272 0.0004 13.3 0.0 1 1 5.9e-06 0.00063 12.6 0.0 116 162 163 206 124 227 0.78 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 6_4 - 562 NAD_binding_8 PF13450.1 68 0.00015 15.8 1.2 1 1 6.9e-07 0.00015 15.8 1.2 1 35 103 136 103 155 0.91 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 F420_oxidored PF03807.12 96 0.04 8.4 6.8 1 3 0.0019 0.41 5.2 1.1 2 33 101 128 100 132 0.87 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 F420_oxidored PF03807.12 96 0.04 8.4 6.8 2 3 0.0041 0.88 4.1 0.2 1 35 272 302 272 347 0.85 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 F420_oxidored PF03807.12 96 0.04 8.4 6.8 3 3 0.099 21 -0.3 0.0 23 51 351 380 341 387 0.76 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_30 - 372 TIGR02432 TIGR02432 189 8.7e-05 16.2 0.1 1 2 1.1e-05 0.0023 11.5 0.0 1 58 52 109 52 119 0.85 # 26702 # 27817 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 2_30 - 372 TIGR02432 TIGR02432 189 8.7e-05 16.2 0.1 2 2 0.0084 1.8 2.1 0.0 140 165 235 260 207 262 0.76 # 26702 # 27817 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_35 - 323 Arch_ATPase PF01637.13 234 9e-05 16.2 0.0 1 1 7e-07 0.00015 15.5 0.0 4 44 45 85 43 94 0.91 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_35 - 323 AAA_16 PF13191.1 185 5.1e-05 17.3 0.8 1 1 2.2e-06 0.00016 15.7 0.0 7 48 47 85 42 102 0.79 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_22 - 816 AAA_16 PF13191.1 185 6.4e-05 17.0 0.2 1 1 4.8e-06 0.00034 14.6 0.2 20 62 447 489 439 648 0.64 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_4 - 206 AAA_16 PF13191.1 185 9.1e-05 16.5 0.1 1 1 1.9e-06 0.00014 15.9 0.1 27 68 11 54 3 168 0.79 # 712 # 1329 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.513 2_11 - 347 AAA_13 PF13166.1 712 0.014 7.7 36.6 1 2 0.0019 0.41 2.9 28.3 283 457 85 259 71 272 0.58 # 8876 # 9916 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_11 - 347 AAA_13 PF13166.1 712 0.014 7.7 36.6 2 2 2.3e-05 0.005 9.2 23.2 287 474 160 339 154 345 0.78 # 8876 # 9916 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_19 - 262 CbiA PF01656.18 195 2.5e-30 99.3 0.0 1 1 3e-32 3.2e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 9307 # 10092 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_22 - 816 CbiA PF01656.18 195 0.00083 12.8 0.0 1 1 1.7e-05 0.0018 11.7 0.0 3 49 455 517 454 593 0.60 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_13 - 504 AAA_14 PF13173.1 128 3.5e-05 17.7 1.3 1 2 2.5e-05 0.0055 10.6 0.1 11 46 28 62 18 156 0.76 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_13 - 504 AAA_14 PF13173.1 128 3.5e-05 17.7 1.3 2 2 0.0011 0.24 5.3 0.0 51 99 176 227 127 241 0.73 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_22 - 290 DREV PF05219.7 265 0.00028 13.8 0.0 1 1 2.3e-06 0.0005 12.9 0.0 88 135 25 70 6 107 0.79 # 11530 # 12399 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.284 6_4 - 562 HI0933_like PF03486.9 409 3.4e-08 26.3 5.6 1 2 9.7e-07 0.00021 13.8 2.9 2 33 100 131 99 139 0.91 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 HI0933_like PF03486.9 409 3.4e-08 26.3 5.6 2 2 2.1e-06 0.00045 12.7 0.0 84 163 287 362 281 379 0.83 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_35 - 323 AAA_29 PF13555.1 62 0.0026 11.3 1.0 1 1 2.7e-05 0.0058 10.2 0.3 21 38 59 76 54 79 0.86 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 6_4 - 562 FAD_binding_2 PF00890.19 417 1.1e-05 18.4 5.5 1 3 5e-08 1.1e-05 18.4 5.5 2 32 101 131 100 138 0.91 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 FAD_binding_2 PF00890.19 417 1.1e-05 18.4 5.5 2 3 0.016 3.4 0.3 0.9 142 207 311 371 291 383 0.72 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 FAD_binding_2 PF00890.19 417 1.1e-05 18.4 5.5 3 3 0.0019 0.4 3.4 0.1 373 402 374 405 368 419 0.86 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_35 - 323 AAA PF00004.24 132 0.00074 13.7 0.1 1 1 7.4e-06 0.0016 12.6 0.1 2 33 65 96 64 149 0.83 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 7_1 - 139 Ribosomal_S8 PF00410.14 129 0.0028 11.5 1.8 1 2 0.0059 1.3 2.9 0.1 41 73 2 29 1 35 0.56 # 78 # 494 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 7_1 - 139 Ribosomal_S8 PF00410.14 129 0.0028 11.5 1.8 2 2 0.00012 0.026 8.4 0.1 50 87 90 128 50 135 0.79 # 78 # 494 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 2_13 - 504 UvrD_C PF13361.1 351 2e-10 34.6 0.0 1 1 1.7e-12 3.7e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_30 - 372 PAPS_reduct PF01507.14 174 7.6e-12 39.4 0.4 1 2 0.028 3 1.6 0.0 2 17 53 68 52 91 0.76 # 26702 # 27817 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 2_30 - 372 PAPS_reduct PF01507.14 174 7.6e-12 39.4 0.4 2 2 8.8e-13 9.5e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 26702 # 27817 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_58 - 818 PAPS_reduct PF01507.14 174 0.00012 15.9 0.0 1 1 7.3e-06 0.00078 13.3 0.0 3 151 69 256 67 262 0.70 # 52725 # 55178 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.521 6_4 - 562 Pyr_redox_3 PF13738.1 203 2e-18 61.1 0.1 1 3 3.1e-06 0.00066 13.7 0.1 167 199 98 130 70 144 0.84 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 Pyr_redox_3 PF13738.1 203 2e-18 61.1 0.1 2 3 6.9e-09 1.5e-06 22.4 0.0 115 201 219 304 172 306 0.78 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 Pyr_redox_3 PF13738.1 203 2e-18 61.1 0.1 3 3 1.5e-08 3.2e-06 21.3 0.0 89 147 317 372 309 434 0.82 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_16 - 212 N6_Mtase PF02384.11 311 8e-07 22.3 0.0 1 1 5.9e-09 1.3e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 7113 # 7748 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 1_6 - 622 TraG-D_C PF12696.2 128 6.1e-15 49.2 0.0 1 1 1e-16 1.1e-14 48.4 0.0 1 124 471 595 471 599 0.83 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_22 - 816 TraG-D_C PF12696.2 128 1.9e-06 21.8 0.0 1 1 4e-08 4.3e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_19 - 262 AAA_31 PF13614.1 157 2.8e-10 34.3 0.0 1 1 2.6e-12 5.7e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 9307 # 10092 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_37 - 176 AAA_33 PF13671.1 143 0.0012 12.7 0.0 1 1 8.6e-06 0.0018 12.1 0.0 26 102 33 104 23 109 0.75 # 37353 # 37880 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.545 3_22 - 290 Methyltransf_26 PF13659.1 117 5.8e-07 23.6 0.0 1 1 4e-09 8.7e-07 23.0 0.0 2 81 31 102 30 148 0.87 # 11530 # 12399 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.284 2_13 - 504 AAA_30 PF13604.1 196 1.1e-07 25.7 0.1 1 2 9.2e-07 0.0002 15.0 0.0 19 80 20 81 11 109 0.77 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_13 - 504 AAA_30 PF13604.1 196 1.1e-07 25.7 0.1 2 2 0.00017 0.037 7.5 0.0 115 133 211 229 174 278 0.75 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_6 - 622 FtsK_SpoIIIE PF01580.13 205 1.8e-07 24.8 0.0 1 2 3.8e-08 2.8e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_6 - 622 FtsK_SpoIIIE PF01580.13 205 1.8e-07 24.8 0.0 2 2 0.042 3 1.2 0.0 176 204 481 509 472 510 0.86 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_22 - 816 FtsK_SpoIIIE PF01580.13 205 1.7e-06 21.6 0.1 1 1 6.6e-08 4.7e-06 20.2 0.1 33 84 446 495 401 698 0.67 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_4 - 206 FtsK_SpoIIIE PF01580.13 205 0.0016 11.9 0.2 1 1 7.1e-05 0.0051 10.3 0.0 34 53 4 23 1 28 0.83 # 712 # 1329 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.513 3_22 - 290 MTS PF05175.9 170 0.00067 13.0 0.0 1 1 4.8e-06 0.001 12.4 0.0 30 113 24 106 14 114 0.79 # 11530 # 12399 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.284 1_35 - 323 ABC_tran PF00005.22 137 0.0015 12.8 0.0 1 1 1.3e-05 0.0029 11.9 0.0 11 46 61 96 55 117 0.85 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 6_4 - 562 K_oxygenase PF13434.1 341 4.9e-06 19.6 0.7 1 3 0.0064 1.4 1.7 0.3 189 223 97 129 86 132 0.76 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 K_oxygenase PF13434.1 341 4.9e-06 19.6 0.7 2 3 1.7e-06 0.00037 13.4 0.0 130 231 217 309 199 328 0.81 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 K_oxygenase PF13434.1 341 4.9e-06 19.6 0.7 3 3 0.013 2.7 0.7 0.0 126 160 330 366 311 376 0.69 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_13 - 504 AAA_19 PF13245.1 76 3.4e-09 30.4 0.0 1 1 8.4e-11 9e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_35 - 323 AAA_19 PF13245.1 76 0.00033 14.4 0.1 1 1 7e-06 0.00075 13.3 0.1 10 35 61 86 51 112 0.76 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_22 - 816 AAA_10 PF12846.2 304 5.7e-59 193.9 0.1 1 1 9e-61 9.7e-59 193.2 0.1 1 296 451 729 451 738 0.93 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_6 - 622 AAA_10 PF12846.2 304 2e-18 60.8 0.2 1 1 5.3e-20 5.7e-18 59.3 0.2 2 299 173 549 172 553 0.71 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 6_4 - 562 FAD_oxidored PF12831.2 428 5e-06 19.7 4.0 1 2 2.3e-08 5e-06 19.7 4.0 2 41 101 139 100 159 0.83 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 FAD_oxidored PF12831.2 428 5e-06 19.7 4.0 2 2 0.018 3.9 0.3 0.0 85 120 306 341 260 364 0.69 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 DAO PF01266.19 358 2.5e-10 33.7 10.8 1 2 4.6e-08 1e-05 18.6 1.4 2 35 101 134 100 161 0.85 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 DAO PF01266.19 358 2.5e-10 33.7 10.8 2 2 1.4e-08 3.1e-06 20.2 1.0 152 205 315 367 305 440 0.76 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_13 - 504 ResIII PF04851.10 184 2.3e-06 21.5 0.0 1 1 5.5e-08 5.9e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_6 - 622 ResIII PF04851.10 184 0.00023 15.0 0.0 1 1 4.2e-06 0.00046 14.0 0.0 23 57 170 206 129 214 0.74 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_11 - 347 DUF3584 PF12128.3 1201 0.036 5.3 51.1 1 2 0.0051 1.1 0.4 32.3 377 534 86 242 42 246 0.65 # 8876 # 9916 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_11 - 347 DUF3584 PF12128.3 1201 0.036 5.3 51.1 2 2 2e-05 0.0043 8.3 20.6 613 709 225 327 220 345 0.80 # 8876 # 9916 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_13 - 504 Viral_helicase1 PF01443.13 234 2e-10 34.6 0.0 1 3 1.4e-05 0.0031 11.0 0.0 2 49 23 73 22 87 0.67 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_13 - 504 Viral_helicase1 PF01443.13 234 2e-10 34.6 0.0 2 3 1.8e-05 0.0039 10.7 0.0 56 105 188 234 146 256 0.78 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_13 - 504 Viral_helicase1 PF01443.13 234 2e-10 34.6 0.0 3 3 5.2e-05 0.011 9.2 0.0 176 227 404 462 344 467 0.75 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 6_4 - 562 NAD_binding_9 PF13454.1 156 0.027 8.2 4.4 1 3 0.0096 2.1 2.1 0.1 1 41 102 136 102 163 0.81 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 NAD_binding_9 PF13454.1 156 0.027 8.2 4.4 2 3 0.059 13 -0.5 0.0 134 155 219 242 197 243 0.66 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 NAD_binding_9 PF13454.1 156 0.027 8.2 4.4 3 3 0.00065 0.14 5.9 0.3 117 155 327 363 312 364 0.68 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_6 - 622 DEAD PF00270.24 169 5e-05 16.8 0.0 1 1 4.4e-07 9.4e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 6_4 - 562 Pyr_redox PF00070.22 80 4.7e-20 65.8 5.2 1 2 2.2e-06 0.00047 14.6 1.2 2 31 101 130 100 132 0.95 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 Pyr_redox PF00070.22 80 4.7e-20 65.8 5.2 2 2 3.8e-18 8.2e-16 52.2 0.1 1 72 272 341 272 351 0.90 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_6 - 622 DUF853 PF05872.7 504 1.8e-06 20.5 0.0 1 1 1.4e-08 2.9e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_6 - 622 TrwB_AAD_bind PF10412.4 386 4.2e-19 62.3 0.0 1 2 8.9e-13 9.6e-11 34.8 0.0 10 54 167 211 161 313 0.70 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_6 - 622 TrwB_AAD_bind PF10412.4 386 4.2e-19 62.3 0.0 2 2 6.9e-10 7.4e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_22 - 816 TrwB_AAD_bind PF10412.4 386 4.8e-08 25.9 0.0 1 2 1.5e-05 0.0016 11.1 0.0 6 72 442 517 438 520 0.85 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_22 - 816 TrwB_AAD_bind PF10412.4 386 4.8e-08 25.9 0.0 2 2 5.6e-06 0.0006 12.4 0.1 232 301 643 712 613 731 0.66 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_13 - 504 AAA_11 PF13086.1 236 6.2e-07 23.2 0.1 1 1 1.9e-08 4e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_22 - 816 Guanylate_kin PF00625.16 183 0.00035 14.0 0.1 1 3 0.0039 0.83 3.0 0.0 3 26 452 475 450 503 0.86 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_22 - 816 Guanylate_kin PF00625.16 183 0.00035 14.0 0.1 2 3 0.012 2.6 1.4 0.0 76 115 597 637 591 703 0.82 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_22 - 816 Guanylate_kin PF00625.16 183 0.00035 14.0 0.1 3 3 0.001 0.22 4.9 0.0 75 131 714 770 697 777 0.87 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_6 - 622 T4SS-DNA_transf PF02534.9 469 5.5e-05 15.8 0.0 1 2 5.6e-07 0.00012 14.7 0.0 37 114 168 248 125 346 0.72 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_6 - 622 T4SS-DNA_transf PF02534.9 469 5.5e-05 15.8 0.0 2 2 0.097 21 -2.6 0.0 328 389 494 555 474 572 0.74 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_22 - 290 TIGR00755 TIGR00755 256 1.7e-47 155.5 0.5 1 1 1e-49 2.1e-47 155.2 0.5 8 255 8 251 2 252 0.95 # 11530 # 12399 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.284 1_6 - 622 ArgK PF03308.11 267 0.00023 13.9 0.0 1 1 1.8e-06 0.0004 13.2 0.0 12 68 158 209 153 214 0.88 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_30 - 372 tRNA_Me_trans PF03054.11 356 8.1e-05 15.2 0.0 1 2 1.1e-06 0.00025 13.6 0.0 2 71 52 122 51 144 0.74 # 26702 # 27817 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 2_30 - 372 tRNA_Me_trans PF03054.11 356 8.1e-05 15.2 0.0 2 2 0.042 8.9 -1.4 0.0 193 224 274 305 236 311 0.83 # 26702 # 27817 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 6_4 - 562 AlaDh_PNT_C PF01262.16 168 5.5e-06 20.0 5.0 1 2 1.5e-06 0.00033 14.2 1.3 3 50 81 128 79 131 0.91 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 6_4 - 562 AlaDh_PNT_C PF01262.16 168 5.5e-06 20.0 5.0 2 2 0.00026 0.056 7.0 0.1 19 57 269 307 260 359 0.87 # 1236 # 2921 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_13 - 504 UvrD-helicase PF00580.16 315 1.2e-16 54.9 3.9 1 2 2.9e-06 0.00062 13.1 0.1 2 38 8 44 7 64 0.81 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_13 - 504 UvrD-helicase PF00580.16 315 1.2e-16 54.9 3.9 2 2 3.4e-15 7.3e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 10203 # 11714 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_22 - 816 AAA_25 PF13481.1 194 0.00074 12.9 0.0 1 1 2.5e-05 0.0018 11.6 0.0 36 86 454 494 447 532 0.82 # 23296 # 25743 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_19 - 262 AAA_25 PF13481.1 194 0.00084 12.7 0.0 1 1 1.8e-05 0.0013 12.1 0.0 42 91 12 51 11 134 0.78 # 9307 # 10092 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_6 - 622 AAA_25 PF13481.1 194 0.00084 12.7 0.0 1 1 3.7e-05 0.0026 11.1 0.0 20 137 159 265 145 272 0.78 # 7231 # 9096 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_35 - 323 AAA_5 PF07728.9 139 2.1e-18 60.4 0.0 1 1 1.6e-20 3.4e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 35402 # 36370 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/539223fb-603f-44dd-ba08-18576d145346 # Target file: checkm_output/bins/pm640/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm640/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/539223fb-603f-44dd-ba08-18576d145346 checkm_output/bins/pm640/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:08:10 2020 # [ok]