# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 8_1 - 210 Mg_chelatase PF01078.16 207 0.00047 12.4 0.0 1 1 8.5e-06 0.00092 11.4 0.0 23 42 98 117 91 126 0.90 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 1_23 - 372 ATP_bind_3 PF01171.15 182 0.00018 14.1 0.0 1 1 2.8e-06 0.00031 13.3 0.0 3 66 130 190 128 199 0.79 # 17974 # 19089 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 2_9 - 232 cobW PF02492.14 178 0.00055 12.4 0.0 1 1 8.3e-06 0.0009 11.7 0.0 3 21 39 57 37 80 0.85 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 IstB_IS21 PF01695.12 178 5.4e-68 220.9 0.3 1 1 3.2e-69 1.8e-67 219.2 0.0 1 160 51 210 51 210 0.99 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 1_28 - 98 IstB_IS21 PF01695.12 178 1.7e-24 79.2 0.0 1 1 4.3e-26 2.3e-24 78.8 0.0 119 177 1 59 1 60 0.98 # 23439 # 23732 # -1 # ID=1_28;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.473 1_11 - 402 MipZ PF09140.6 261 2e-06 20.0 0.3 1 2 1.3e-05 0.0014 10.7 0.1 1 50 110 164 110 190 0.79 # 10162 # 11367 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.463 1_11 - 402 MipZ PF09140.6 261 2e-06 20.0 0.3 2 2 0.00019 0.021 6.9 0.0 90 135 237 282 224 287 0.89 # 10162 # 11367 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.463 4_4 - 553 3HCDH_N PF02737.13 180 0.00054 12.6 0.1 1 1 8.6e-06 0.00094 11.9 0.1 3 72 154 223 152 242 0.83 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 3_7 - 1757 UvrD_C_2 PF13538.1 104 1.3e-07 24.8 0.7 1 2 0.011 1.2 2.4 0.0 6 45 1227 1266 1223 1295 0.75 # 4662 # 9932 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 3_7 - 1757 UvrD_C_2 PF13538.1 104 1.3e-07 24.8 0.7 2 2 5.2e-08 5.7e-06 19.5 0.2 3 102 1341 1444 1339 1446 0.77 # 4662 # 9932 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 4_4 - 553 Pyr_redox_2 PF07992.9 201 8.9e-32 103.6 0.0 1 1 1.7e-33 1.8e-31 102.6 0.0 1 199 2 287 2 289 0.91 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 2_9 - 232 DUF87 PF01935.12 229 0.00025 13.9 0.0 1 2 1.7e-05 0.0018 11.1 0.1 26 44 39 57 21 59 0.91 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 DUF87 PF01935.12 229 0.00025 13.9 0.0 2 2 0.027 2.9 0.6 0.0 136 184 128 196 95 215 0.65 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 NB-ARC PF00931.17 287 0.00066 11.6 0.1 1 1 9.7e-06 0.0011 10.9 0.1 18 37 35 54 24 65 0.87 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 AAA_22 PF13401.1 131 1.7e-07 24.5 0.3 1 2 5.5e-05 0.002 11.3 0.0 5 21 98 114 94 134 0.85 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_22 PF13401.1 131 1.7e-07 24.5 0.3 2 2 7.3e-05 0.0026 10.9 0.1 77 121 147 195 132 203 0.72 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 AAA_22 PF13401.1 131 2.6e-05 17.4 0.7 1 1 5.1e-06 0.00019 14.7 0.7 3 25 35 57 31 207 0.82 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_25 - 575 AAA_22 PF13401.1 131 0.00033 13.9 0.1 1 2 0.00026 0.0093 9.2 0.0 3 26 377 400 374 426 0.88 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 1_25 - 575 AAA_22 PF13401.1 131 0.00033 13.9 0.1 2 2 0.085 3.1 1.0 0.0 79 98 502 520 466 553 0.68 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 8_1 - 210 AAA_3 PF07726.6 131 0.00081 12.1 0.0 1 1 1.1e-05 0.0012 11.5 0.0 2 74 100 170 99 194 0.69 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 1_25 - 575 AAA_15 PF13175.1 415 1e-06 21.0 0.1 1 1 5.2e-08 2.8e-06 19.6 0.1 369 415 509 551 498 551 0.90 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 2_9 - 232 AAA_15 PF13175.1 415 0.00027 13.1 0.0 1 2 8e-05 0.0044 9.1 0.0 25 46 34 60 9 93 0.72 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 AAA_15 PF13175.1 415 0.00027 13.1 0.0 2 2 0.011 0.61 2.0 0.0 372 414 164 205 140 205 0.89 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 4_4 - 553 NAD_binding_7 PF13241.1 103 0.0006 13.1 0.1 1 2 0.022 2.3 1.6 0.0 9 36 2 31 1 90 0.77 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 NAD_binding_7 PF13241.1 103 0.0006 13.1 0.1 2 2 0.0001 0.011 9.1 0.0 9 71 152 246 146 279 0.62 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 8_1 - 210 AAA_17 PF13207.1 121 6.9e-06 19.9 0.0 1 1 7.1e-07 3.9e-05 17.5 0.0 2 64 100 156 99 198 0.57 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 AAA_17 PF13207.1 121 3e-05 17.9 0.2 1 1 8.7e-07 4.8e-05 17.2 0.2 2 19 39 56 38 219 0.85 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 AAA_21 PF13304.1 303 2.5e-13 43.6 0.0 1 2 3.7e-06 0.0002 14.3 0.1 1 22 38 59 38 71 0.87 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 AAA_21 PF13304.1 303 2.5e-13 43.6 0.0 2 2 6.2e-10 3.4e-08 26.8 0.0 234 301 141 205 134 206 0.96 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_25 - 575 AAA_21 PF13304.1 303 2.9e-10 33.5 2.4 1 2 0.0037 0.2 4.5 0.0 11 48 390 425 385 431 0.85 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 1_25 - 575 AAA_21 PF13304.1 303 2.9e-10 33.5 2.4 2 2 3.1e-10 1.7e-08 27.8 0.1 237 303 492 552 440 552 0.88 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 2_9 - 232 MobB PF03205.9 140 0.00029 13.6 0.0 1 1 4.8e-06 0.00052 12.8 0.0 3 20 39 56 37 108 0.84 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_23 - 372 NAD_synthase PF02540.12 242 2e-06 19.8 0.0 1 1 3.1e-08 3.4e-06 19.1 0.0 6 84 114 193 110 200 0.91 # 17974 # 19089 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_11 - 402 ArsA_ATPase PF02374.10 305 0.00033 12.8 0.0 1 1 1.4e-05 0.00077 11.5 0.0 4 136 113 255 110 257 0.69 # 10162 # 11367 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.463 8_1 - 210 ArsA_ATPase PF02374.10 305 0.0005 12.2 0.0 1 1 1.3e-05 0.00073 11.6 0.0 6 38 102 134 98 176 0.90 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 PhoH PF02562.11 205 1e-06 21.1 0.0 1 1 2.8e-08 3.1e-06 19.6 0.0 15 47 93 125 80 135 0.87 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AFG1_ATPase PF03969.11 362 0.00023 13.0 0.0 1 1 2.6e-06 0.00028 12.7 0.0 63 166 98 198 49 203 0.75 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 3_2 - 86 Cytidylate_kin2 PF13189.1 179 0.00016 14.6 0.3 1 1 1.8e-06 0.00019 14.4 0.3 112 155 40 83 30 85 0.85 # 1024 # 1281 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.492 4_4 - 553 NAD_binding_8 PF13450.1 68 2.6e-08 26.9 6.7 1 2 9.2e-07 0.0001 15.4 0.6 1 32 5 38 5 51 0.90 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 NAD_binding_8 PF13450.1 68 2.6e-08 26.9 6.7 2 2 4e-06 0.00043 13.4 0.1 2 30 156 184 155 185 0.95 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 2_9 - 232 SMC_N PF02463.14 220 3.1e-09 29.4 0.0 1 1 2.3e-09 2.5e-07 23.1 0.0 24 212 36 216 24 220 0.76 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_23 - 372 TIGR02432 TIGR02432 189 8.1e-05 15.3 0.0 1 1 1.3e-06 0.00015 14.5 0.0 2 66 129 190 128 199 0.77 # 17974 # 19089 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_11 - 402 Fer4_NifH PF00142.13 273 1.9e-06 20.2 0.0 1 1 3.4e-08 3.7e-06 19.3 0.0 7 71 117 186 112 194 0.81 # 10162 # 11367 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.463 8_1 - 210 Arch_ATPase PF01637.13 234 0.00025 13.8 0.0 1 1 1.2e-05 0.0013 11.4 0.0 20 120 97 192 81 196 0.62 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 1_23 - 372 QueC PF06508.8 210 2.5e-06 19.9 0.0 1 1 3.6e-08 3.9e-06 19.3 0.0 3 62 130 191 128 198 0.82 # 17974 # 19089 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 8_1 - 210 AAA_16 PF13191.1 185 3.5e-06 20.1 1.4 1 3 0.017 0.95 2.4 0.0 127 173 25 88 3 94 0.61 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_16 PF13191.1 185 3.5e-06 20.1 1.4 2 3 4e-06 0.00022 14.3 0.1 23 44 96 117 86 136 0.80 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_16 PF13191.1 185 3.5e-06 20.1 1.4 3 3 0.031 1.7 1.6 0.1 126 162 137 170 119 195 0.59 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 AAA_16 PF13191.1 185 6.6e-06 19.2 0.4 1 1 2.8e-07 1.5e-05 18.0 0.4 18 56 30 69 23 200 0.73 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 AAA_23 PF13476.1 202 0.00054 13.3 0.0 1 1 1.4e-05 0.00077 12.8 0.0 19 39 36 56 18 94 0.84 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_25 - 575 AAA_23 PF13476.1 202 0.0013 12.1 0.0 1 1 4.5e-05 0.0024 11.2 0.0 6 37 357 396 354 401 0.70 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 2_9 - 232 AAA_18 PF13238.1 129 4.6e-05 16.8 0.7 1 1 6.1e-06 0.00033 14.0 0.7 1 19 39 57 39 214 0.88 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 AAA_18 PF13238.1 129 0.00044 13.6 0.5 1 1 1.8e-05 0.001 12.5 0.3 1 19 100 118 100 175 0.79 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 1_25 - 575 AAA_13 PF13166.1 712 0.00029 12.4 0.0 1 1 7.6e-06 0.00042 11.8 0.0 526 574 508 551 498 564 0.87 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 2_9 - 232 AAA_13 PF13166.1 712 0.0018 9.7 0.0 1 1 6.8e-05 0.0037 8.7 0.0 20 42 40 62 25 94 0.83 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 402 CbiA PF01656.18 195 7.3e-24 77.2 0.0 1 1 2.3e-25 1.3e-23 76.5 0.0 1 174 112 333 112 351 0.70 # 10162 # 11367 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.463 8_1 - 210 CbiA PF01656.18 195 6.4e-05 15.4 0.0 1 1 1.8e-06 0.0001 14.8 0.0 9 37 107 135 100 203 0.62 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 KaiC PF06745.8 227 0.00052 12.2 0.1 1 1 9.4e-06 0.001 11.2 0.1 7 35 25 52 22 66 0.88 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 AAA_14 PF13173.1 128 1.9e-08 27.3 0.0 1 1 1.5e-09 8.1e-08 25.3 0.0 3 96 98 197 96 203 0.71 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 AAA_14 PF13173.1 128 0.00059 12.8 0.0 1 1 2.5e-05 0.0013 11.6 0.0 2 41 36 75 35 131 0.63 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 4_4 - 553 HI0933_like PF03486.9 409 1.7e-07 23.0 5.8 1 3 0.0028 0.3 2.4 0.6 2 32 2 34 1 38 0.74 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 HI0933_like PF03486.9 409 1.7e-07 23.0 5.8 2 3 0.0036 0.39 2.1 0.1 4 35 154 185 151 189 0.90 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 HI0933_like PF03486.9 409 1.7e-07 23.0 5.8 3 3 2.1e-08 2.3e-06 19.3 0.0 112 189 194 269 186 277 0.89 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 2_9 - 232 AAA_29 PF13555.1 62 2.9e-06 19.8 0.1 1 1 1e-07 5.6e-06 18.9 0.1 16 42 30 55 24 71 0.78 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_25 - 575 AAA_29 PF13555.1 62 0.00023 13.7 0.0 1 1 8e-06 0.00044 12.8 0.0 12 40 368 395 366 412 0.83 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 4_4 - 553 FAD_binding_2 PF00890.19 417 0.053 5.3 9.6 1 3 0.0038 0.42 2.3 1.4 2 28 3 29 2 43 0.75 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 FAD_binding_2 PF00890.19 417 0.053 5.3 9.6 2 3 0.0027 0.29 2.8 0.3 138 172 188 222 135 254 0.80 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 FAD_binding_2 PF00890.19 417 0.053 5.3 9.6 3 3 0.0019 0.21 3.3 0.0 372 402 261 285 255 288 0.88 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 8_1 - 210 AAA PF00004.24 132 2.9e-09 30.2 0.0 1 1 7.8e-11 8.5e-09 28.7 0.0 1 74 100 174 100 201 0.73 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 Bac_DnaA PF00308.13 219 1.8e-12 40.4 0.0 1 1 2.5e-14 2.7e-12 39.8 0.0 36 139 99 199 71 207 0.87 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 Sigma54_activat PF00158.21 168 0.00024 13.6 0.1 1 1 0.00011 0.012 8.1 0.1 19 43 94 118 81 192 0.78 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 4_4 - 553 Pyr_redox_3 PF13738.1 203 4.2e-09 29.8 0.1 1 2 1.1e-05 0.0012 12.0 0.0 88 195 63 178 45 185 0.79 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 Pyr_redox_3 PF13738.1 203 4.2e-09 29.8 0.1 2 2 2.6e-06 0.00028 14.0 0.0 81 146 190 253 180 282 0.83 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 2_9 - 232 MMR_HSR1 PF01926.18 116 0.0002 14.3 0.2 1 1 3.2e-06 0.00035 13.6 0.2 2 20 39 57 38 201 0.91 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 DUF258 PF03193.11 161 1.5e-06 20.5 0.0 1 1 2e-08 2.2e-06 19.9 0.0 19 61 19 62 4 91 0.83 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_8 - 444 TraG-D_C PF12696.2 128 4e-21 68.3 0.0 1 1 5.9e-23 6.5e-21 67.6 0.0 1 127 115 237 115 238 0.86 # 9932 # 11263 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 1_23 - 372 Asn_synthase PF00733.16 255 0.00022 13.8 0.1 1 1 1.2e-05 0.0013 11.3 0.1 20 228 129 365 111 371 0.64 # 17974 # 19089 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 4_9 - 754 TruB_N PF01509.13 149 0.00034 13.8 0.0 1 1 6.4e-06 0.0007 12.8 0.0 20 103 10 99 7 114 0.81 # 7633 # 9894 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 1_11 - 402 AAA_31 PF13614.1 157 2.3e-07 23.9 0.0 1 2 4.5e-05 0.0024 10.8 0.0 2 90 111 204 110 225 0.79 # 10162 # 11367 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.463 1_11 - 402 AAA_31 PF13614.1 157 2.3e-07 23.9 0.0 2 2 5.8e-05 0.0031 10.5 0.0 109 148 237 275 227 280 0.87 # 10162 # 11367 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.463 8_1 - 210 AAA_31 PF13614.1 157 0.00065 12.7 0.1 1 1 3.7e-05 0.002 11.1 0.1 10 40 106 136 101 195 0.83 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 NTPase_1 PF03266.10 168 0.00011 15.0 0.1 1 2 6.9e-05 0.0038 10.0 0.0 2 44 39 83 38 91 0.80 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 NTPase_1 PF03266.10 168 0.00011 15.0 0.1 2 2 0.0085 0.46 3.2 0.0 87 151 153 219 115 230 0.73 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 NTPase_1 PF03266.10 168 0.00018 14.3 0.0 1 2 0.00084 0.046 6.4 0.0 2 17 100 115 99 129 0.80 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 NTPase_1 PF03266.10 168 0.00018 14.3 0.0 2 2 0.0014 0.075 5.7 0.0 82 107 146 170 135 197 0.76 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_33 PF13671.1 143 0.00021 14.2 0.0 1 1 1e-05 0.00055 12.9 0.0 2 42 100 145 100 170 0.65 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 AAA_33 PF13671.1 143 0.00041 13.3 1.4 1 1 6.1e-05 0.0033 10.3 1.4 2 19 39 56 38 214 0.73 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 KTI12 PF08433.5 270 0.00049 12.4 0.0 1 1 7.6e-06 0.00083 11.6 0.0 4 82 100 170 99 195 0.78 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 3_7 - 1757 AAA_30 PF13604.1 196 4e-44 143.6 15.1 1 2 2.9e-05 0.001 11.6 3.9 7 146 420 551 416 561 0.81 # 4662 # 9932 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 3_7 - 1757 AAA_30 PF13604.1 196 4e-44 143.6 15.1 2 2 1.5e-43 5.4e-42 136.6 1.9 1 186 968 1156 968 1162 0.94 # 4662 # 9932 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 2_9 - 232 AAA_30 PF13604.1 196 0.00012 14.8 0.4 1 1 5.6e-06 0.0002 14.0 0.4 18 58 36 76 29 202 0.87 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 AAA_30 PF13604.1 196 0.00065 12.3 0.0 1 1 0.00012 0.0043 9.6 0.0 18 54 97 133 86 195 0.78 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 FtsK_SpoIIIE PF01580.13 205 0.00014 14.4 0.0 1 1 3.8e-06 0.00041 12.9 0.0 37 60 35 58 14 77 0.81 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 AAA_35 PF14516.1 331 0.00014 13.5 0.3 1 3 0.0032 0.35 2.4 0.1 237 272 10 42 4 60 0.78 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_35 PF14516.1 331 0.00014 13.5 0.3 2 3 0.0022 0.24 2.9 0.0 15 75 81 141 71 152 0.80 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_35 PF14516.1 331 0.00014 13.5 0.3 3 3 0.00051 0.055 5.0 0.1 122 161 153 192 142 199 0.89 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 1_10 - 324 eIF-5a PF01287.15 69 0.00041 13.3 0.2 1 1 1.6e-05 0.0017 11.4 0.1 27 67 122 168 118 170 0.91 # 9194 # 10165 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.441 4_4 - 553 Lycopene_cycl PF05834.7 374 2.3e-05 16.5 2.9 1 3 0.00072 0.078 4.8 0.2 2 40 3 41 2 42 0.90 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 Lycopene_cycl PF05834.7 374 2.3e-05 16.5 2.9 2 3 0.0013 0.14 4.0 0.1 4 38 155 187 153 191 0.92 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 Lycopene_cycl PF05834.7 374 2.3e-05 16.5 2.9 3 3 0.00022 0.024 6.5 0.0 90 155 194 260 189 268 0.84 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 2_9 - 232 ABC_tran PF00005.22 137 2.6e-36 118.0 0.0 1 1 6.9e-38 3.7e-36 117.5 0.0 1 136 26 171 26 172 0.92 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_25 - 575 ABC_tran PF00005.22 137 3.6e-29 94.8 0.0 1 1 1e-30 5.7e-29 94.2 0.0 2 137 369 520 368 520 0.97 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 4_4 - 553 K_oxygenase PF13434.1 341 7e-06 18.1 0.0 1 1 1.5e-07 1.7e-05 16.9 0.0 107 214 69 174 66 190 0.78 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_25 - 575 TIGR03263 TIGR03263 180 0.00068 12.0 0.0 1 1 1.2e-05 0.0013 11.1 0.0 2 23 379 400 378 408 0.87 # 20045 # 21769 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 2_9 - 232 ATP-synt_ab PF00006.20 215 0.00029 13.4 0.1 1 1 8.3e-06 0.00091 11.8 0.1 8 35 29 56 23 74 0.86 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 RuvB_N PF05496.7 234 6.9e-06 18.2 0.2 1 1 1.4e-07 1.5e-05 17.1 0.2 48 119 95 176 71 183 0.73 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_19 PF13245.1 76 7.3e-08 25.2 0.1 1 1 7.2e-09 2.6e-07 23.4 0.0 13 52 100 135 89 153 0.85 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 3_7 - 1757 AAA_19 PF13245.1 76 2e-07 23.8 2.0 1 1 1.7e-08 6.1e-07 22.2 0.5 7 76 981 1047 974 1047 0.74 # 4662 # 9932 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 2_9 - 232 AAA_19 PF13245.1 76 0.0002 14.1 0.1 1 1 5.4e-05 0.002 11.0 0.0 10 54 36 75 29 87 0.75 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_8 - 444 AAA_10 PF12846.2 304 3.9e-06 19.5 0.0 1 1 1.5e-07 5.4e-06 19.0 0.0 202 296 95 190 14 196 0.85 # 9932 # 11263 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 2_9 - 232 AAA_10 PF12846.2 304 1.4e-05 17.6 0.0 1 1 1e-06 3.7e-05 16.3 0.0 4 29 39 65 37 85 0.76 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 AAA_10 PF12846.2 304 8.1e-05 15.1 0.0 1 1 4.6e-06 0.00017 14.1 0.0 2 35 98 131 97 165 0.89 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 SbcCD_C PF13558.1 90 9.3e-06 18.6 0.2 1 1 1.3e-06 0.00014 14.8 0.2 32 89 143 187 126 188 0.76 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 4_4 - 553 FAD_oxidored PF12831.2 428 0.0013 10.8 4.1 1 2 0.00026 0.029 6.4 2.3 2 28 3 29 2 34 0.90 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 FAD_oxidored PF12831.2 428 0.0013 10.8 4.1 2 2 0.0014 0.16 4.0 0.0 50 120 149 221 138 240 0.68 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 DAO PF01266.19 358 9e-12 37.5 7.1 1 3 0.00033 0.036 5.9 0.4 1 33 2 37 2 46 0.89 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 DAO PF01266.19 358 9e-12 37.5 7.1 2 3 4.1e-07 4.4e-05 15.5 0.2 5 32 156 183 152 187 0.92 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 DAO PF01266.19 358 9e-12 37.5 7.1 3 3 6.6e-08 7.2e-06 18.1 0.0 148 204 192 248 189 288 0.88 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_2 - 557 ThiF PF00899.16 136 1.8e-14 46.8 0.0 1 1 2.7e-16 2.9e-14 46.1 0.0 6 109 371 476 366 499 0.86 # 227 # 1897 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.459 3_7 - 1757 Viral_helicase1 PF01443.13 234 0.00037 13.1 0.0 1 2 0.00028 0.015 7.8 0.0 1 118 988 1121 988 1212 0.52 # 4662 # 9932 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 3_7 - 1757 Viral_helicase1 PF01443.13 234 0.00037 13.1 0.0 2 2 0.013 0.72 2.3 0.0 171 234 1387 1447 1342 1447 0.63 # 4662 # 9932 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 8_1 - 210 Viral_helicase1 PF01443.13 234 0.0013 11.2 0.0 1 1 3.7e-05 0.002 10.7 0.0 3 75 102 171 100 181 0.78 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 4_4 - 553 NAD_binding_9 PF13454.1 156 2.1e-05 17.4 5.2 1 4 0.023 2.5 0.9 0.1 1 33 4 33 4 43 0.82 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 NAD_binding_9 PF13454.1 156 2.1e-05 17.4 5.2 2 4 0.015 1.6 1.5 0.0 117 155 72 114 58 115 0.73 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 NAD_binding_9 PF13454.1 156 2.1e-05 17.4 5.2 3 4 0.0026 0.29 3.9 0.3 2 33 155 181 154 204 0.81 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 NAD_binding_9 PF13454.1 156 2.1e-05 17.4 5.2 4 4 3e-05 0.0033 10.2 0.0 109 154 199 244 191 246 0.80 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 8_1 - 210 DEAD PF00270.24 169 0.00028 13.4 0.1 1 2 3.7e-05 0.0041 9.6 0.1 13 63 96 143 82 178 0.74 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 DEAD PF00270.24 169 0.00028 13.4 0.1 2 2 0.0034 0.37 3.3 0.0 110 131 149 170 134 198 0.69 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 4_4 - 553 Pyr_redox PF00070.22 80 1.1e-17 57.3 7.2 1 2 0.002 0.22 5.1 1.0 1 29 2 30 2 35 0.93 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 4_4 - 553 Pyr_redox PF00070.22 80 1.1e-17 57.3 7.2 2 2 5.1e-19 5.6e-17 55.0 0.1 3 77 154 228 152 231 0.92 # 1699 # 3357 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 3_8 - 444 TrwB_AAD_bind PF10412.4 386 2.3e-94 309.1 0.0 1 1 2.6e-96 2.9e-94 308.8 0.0 137 386 2 257 1 257 0.98 # 9932 # 11263 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 3_7 - 1757 AAA_11 PF13086.1 236 0.00023 13.8 0.0 1 1 2.1e-06 0.00023 13.8 0.0 2 75 969 1039 968 1059 0.81 # 4662 # 9932 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 8_1 - 210 Sigma54_activ_2 PF14532.1 138 0.00044 13.3 0.1 1 1 1.4e-05 0.0015 11.6 0.0 17 110 93 200 82 206 0.67 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 3_8 - 444 T4SS-DNA_transf PF02534.9 469 7e-10 31.0 0.0 1 1 8.3e-12 9.1e-10 30.6 0.0 264 364 78 175 21 209 0.77 # 9932 # 11263 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 8_1 - 210 ArgK PF03308.11 267 0.0001 14.1 0.0 1 1 1.6e-06 0.00017 13.4 0.0 27 66 95 134 80 136 0.85 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 5_8 - 657 Plug PF07715.10 108 4.1e-24 78.1 1.9 1 1 2.3e-25 1.2e-23 76.5 1.9 3 108 46 149 44 149 0.94 # 7365 # 9335 # 1 # ID=5_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.489 4_9 - 754 Plug PF07715.10 108 1.6e-10 34.4 4.8 1 1 2.9e-12 1.6e-10 34.4 4.8 13 107 61 166 43 167 0.89 # 7633 # 9894 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 8_1 - 210 AAA_24 PF13479.1 213 0.0007 12.2 0.0 1 1 9.2e-06 0.001 11.7 0.0 5 23 99 117 95 156 0.87 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 NACHT PF05729.7 166 8.9e-05 15.2 0.5 1 2 6.2e-05 0.0034 10.1 0.1 3 20 100 117 98 131 0.84 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 NACHT PF05729.7 166 8.9e-05 15.2 0.5 2 2 0.0087 0.48 3.1 0.1 57 127 136 197 124 203 0.70 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 NACHT PF05729.7 166 0.00021 14.0 0.1 1 1 1.7e-05 0.00093 11.9 0.0 3 20 39 56 37 76 0.86 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 AAA_25 PF13481.1 194 4.6e-07 22.4 0.1 1 1 1.4e-08 7.7e-07 21.7 0.1 22 66 81 132 60 192 0.69 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 2_9 - 232 AAA_25 PF13481.1 194 6.6e-06 18.6 0.0 1 2 1e-06 5.6e-05 15.6 0.0 29 58 32 62 14 131 0.78 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 AAA_25 PF13481.1 194 6.6e-06 18.6 0.0 2 2 0.034 1.8 0.9 0.0 161 188 175 201 165 206 0.69 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 AAA_28 PF13521.1 163 8.1e-07 22.1 0.1 1 2 1.2e-06 6.3e-05 16.0 0.0 2 21 39 58 38 94 0.79 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 232 AAA_28 PF13521.1 163 8.1e-07 22.1 0.1 2 2 0.0057 0.31 4.0 0.0 19 79 111 168 104 174 0.63 # 9094 # 9789 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_1 - 210 AAA_28 PF13521.1 163 2.4e-05 17.4 0.9 1 2 1.2e-05 0.00065 12.7 0.1 2 39 100 141 99 156 0.67 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_28 PF13521.1 163 2.4e-05 17.4 0.9 2 2 0.0075 0.41 3.6 0.0 95 137 144 180 135 200 0.71 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_5 PF07728.9 139 5e-05 16.1 2.3 1 2 0.094 10 -1.1 0.0 96 125 20 47 4 61 0.51 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 8_1 - 210 AAA_5 PF07728.9 139 5e-05 16.1 2.3 2 2 1.5e-06 0.00017 14.4 0.7 1 19 99 117 99 190 0.83 # 1 # 630 # -1 # ID=8_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.543 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/8e3071b6-9eb1-4a84-b8d7-b513d61ec9b5 # Target file: checkm_output/bins/pm638/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm638/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8e3071b6-9eb1-4a84-b8d7-b513d61ec9b5 checkm_output/bins/pm638/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:08:09 2020 # [ok]