# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 549 DUF3584 PF12128.3 1201 0.00054 6.4 44.1 1 2 0.00024 0.0017 4.8 25.5 295 429 145 282 111 286 0.78 # 1179 # 2825 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_4 - 549 DUF3584 PF12128.3 1201 0.00054 6.4 44.1 2 2 3.3e-05 0.00023 7.6 18.5 606 791 265 458 262 465 0.78 # 1179 # 2825 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/6bf5dc3a-f806-4267-b950-3d7163de37ed # Target file: checkm_output/bins/pm637/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm637/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6bf5dc3a-f806-4267-b950-3d7163de37ed checkm_output/bins/pm637/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:08:06 2020 # [ok]