# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 78_1 - 53 Mg_chelatase PF01078.16 207 0.00015 15.7 0.0 1 1 1.2e-06 0.00015 15.7 0.0 22 42 15 35 2 45 0.85 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 Mg_chelatase PF01078.16 207 0.0005 14.1 0.0 1 1 4.5e-06 0.00058 13.8 0.0 23 42 47 66 31 73 0.88 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 Mg_chelatase PF01078.16 207 0.0014 12.6 0.0 1 1 2.2e-05 0.0028 11.6 0.0 24 42 6 24 3 34 0.90 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 3_10 - 409 ATP_bind_3 PF01171.15 182 6.7e-06 20.5 0.0 1 1 2.9e-08 1.1e-05 19.8 0.0 2 41 32 72 31 97 0.84 # 8574 # 9800 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 15_2 - 260 IstB_IS21 PF01695.12 178 1.4e-70 231.1 0.1 1 1 5.5e-72 3.1e-70 230.0 0.1 1 178 56 235 56 235 0.98 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 68_1 - 173 IstB_IS21 PF01695.12 178 1.3e-60 198.6 0.0 1 1 3e-62 1.7e-60 198.3 0.0 44 177 1 134 1 135 0.99 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 87_1 - 84 IstB_IS21 PF01695.12 178 2.8e-34 112.9 0.0 1 1 5.4e-36 3e-34 112.8 0.0 2 84 1 83 1 84 0.97 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 29_2 - 107 IstB_IS21 PF01695.12 178 5.5e-27 89.1 0.0 1 1 1.2e-28 6.7e-27 88.8 0.0 1 74 17 90 17 101 0.94 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 78_1 - 53 IstB_IS21 PF01695.12 178 1.9e-18 61.3 0.0 1 1 3.5e-20 1.9e-18 61.3 0.0 44 84 12 52 3 53 0.93 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 14_5 - 78 IstB_IS21 PF01695.12 178 9.5e-13 42.7 0.0 1 1 2.1e-14 1.1e-12 42.5 0.0 1 56 11 66 11 69 0.96 # 2220 # 2453 # 1 # ID=14_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.487 37_3 - 93 IstB_IS21 PF01695.12 178 2.5e-11 38.1 0.5 1 2 0.092 5.1 1.3 0.2 83 111 4 32 2 33 0.87 # 1274 # 1552 # 1 # ID=37_3;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 37_3 - 93 IstB_IS21 PF01695.12 178 2.5e-11 38.1 0.5 2 2 3.7e-12 2.1e-10 35.1 0.0 1 43 51 93 51 93 0.96 # 1274 # 1552 # 1 # ID=37_3;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 15_3 - 400 MipZ PF09140.6 261 5.1e-08 27.1 0.1 1 2 0.00079 0.15 5.8 0.0 2 48 110 161 109 186 0.76 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 15_3 - 400 MipZ PF09140.6 261 5.1e-08 27.1 0.1 2 2 7.5e-08 1.4e-05 19.0 0.0 88 135 234 281 216 288 0.87 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 7_6 - 215 MipZ PF09140.6 261 9.2e-08 26.2 2.3 1 2 0.0016 0.31 4.8 0.5 7 25 8 26 2 38 0.71 # 3142 # 3786 # -1 # ID=7_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 7_6 - 215 MipZ PF09140.6 261 9.2e-08 26.2 2.3 2 2 1.8e-08 3.5e-06 21.1 0.1 70 133 45 108 25 125 0.84 # 3142 # 3786 # -1 # ID=7_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 15_3 - 400 YhjQ PF06564.7 244 0.0019 12.3 0.7 1 3 0.076 29 -1.3 0.0 175 199 28 53 2 95 0.53 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 15_3 - 400 YhjQ PF06564.7 244 0.0019 12.3 0.7 2 3 0.038 15 -0.4 0.0 9 46 116 159 110 169 0.63 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 15_3 - 400 YhjQ PF06564.7 244 0.0019 12.3 0.7 3 3 3.7e-05 0.014 9.5 0.0 106 183 235 311 215 322 0.78 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 10_5 - 950 UvrD_C_2 PF13538.1 104 5.9e-07 24.4 1.0 1 1 5.2e-08 1e-05 20.5 1.0 46 104 451 553 409 553 0.73 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 6_2 - 1210 UvrD_C_2 PF13538.1 104 1.1e-06 23.6 0.5 1 2 0.017 3.3 2.8 0.0 6 44 680 718 676 747 0.75 # 246 # 3875 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.606 6_2 - 1210 UvrD_C_2 PF13538.1 104 1.1e-06 23.6 0.5 2 2 3.1e-07 6e-05 18.0 0.1 4 102 795 897 792 899 0.73 # 246 # 3875 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.606 2_16 - 877 DUF87 PF01935.12 229 9.1e-07 23.7 0.0 1 1 2.4e-08 3e-06 22.0 0.0 26 222 483 670 469 677 0.75 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 2_19 - 107 DUF87 PF01935.12 229 0.00051 14.7 0.0 1 1 6.1e-06 0.00079 14.1 0.0 25 50 74 99 72 103 0.91 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 5_5 - 431 DUF87 PF01935.12 229 0.00074 14.2 0.1 1 1 2.1e-05 0.0027 12.3 0.0 24 45 153 174 152 183 0.92 # 4098 # 5390 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 68_1 - 173 AAA_22 PF13401.1 131 3.5e-07 25.3 0.3 1 2 9.7e-05 0.0047 11.9 0.0 4 21 4 21 1 38 0.85 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 68_1 - 173 AAA_22 PF13401.1 131 3.5e-07 25.3 0.3 2 2 0.00011 0.0054 11.7 0.1 77 121 54 102 27 110 0.73 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 15_2 - 260 AAA_22 PF13401.1 131 4.8e-06 21.6 0.2 1 1 4.2e-05 0.002 13.1 0.0 6 28 104 126 99 204 0.57 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 10_5 - 950 AAA_22 PF13401.1 131 4.7e-05 18.4 0.0 1 2 0.0012 0.059 8.3 0.0 6 28 141 163 135 210 0.82 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 AAA_22 PF13401.1 131 4.7e-05 18.4 0.0 2 2 0.0044 0.21 6.5 0.0 74 124 301 349 266 355 0.73 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 78_1 - 53 AAA_22 PF13401.1 131 0.00055 14.9 0.0 1 1 1.1e-05 0.00055 14.9 0.0 4 21 15 32 9 49 0.85 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 5_5 - 431 AAA_22 PF13401.1 131 0.00073 14.5 0.0 1 1 0.00019 0.009 11.0 0.0 9 66 157 235 151 280 0.70 # 4098 # 5390 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 29_2 - 107 AAA_22 PF13401.1 131 0.00084 14.3 0.0 1 1 4.2e-05 0.002 13.1 0.0 5 21 64 80 60 99 0.83 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 87_1 - 84 AAA_22 PF13401.1 131 0.0013 13.7 0.0 1 1 3.6e-05 0.0017 13.3 0.0 5 21 47 63 43 79 0.85 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 2_19 - 107 AAA_22 PF13401.1 131 0.0026 12.7 0.0 1 1 8.7e-05 0.0042 12.0 0.0 3 27 71 95 66 103 0.87 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 78_1 - 53 SRP54 PF00448.17 196 0.0027 11.9 0.0 1 1 7.6e-06 0.003 11.8 0.0 3 38 17 52 15 53 0.92 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_3 PF07726.6 131 0.0012 13.3 0.0 1 1 5.2e-06 0.002 12.6 0.0 2 75 7 78 6 130 0.73 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 68_1 - 173 AAA_17 PF13207.1 121 4.6e-05 19.1 0.0 1 1 7.3e-07 5.7e-05 18.8 0.0 2 77 7 73 6 151 0.65 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 78_1 - 53 AAA_17 PF13207.1 121 0.00011 17.9 0.0 1 1 1.5e-06 0.00011 17.8 0.0 2 20 18 36 17 51 0.78 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 AAA_17 PF13207.1 121 0.00021 16.9 0.0 1 1 4.3e-06 0.00033 16.3 0.0 2 20 49 67 48 81 0.79 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 4_7 - 742 AAA_17 PF13207.1 121 0.0012 14.4 0.0 1 1 4.7e-05 0.0037 12.9 0.0 3 27 189 217 187 294 0.71 # 6907 # 9132 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 29_2 - 107 AAA_17 PF13207.1 121 0.0038 12.9 0.0 1 1 8.4e-05 0.0065 12.1 0.0 2 17 66 81 65 101 0.86 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 2_16 - 877 MobB PF03205.9 140 0.001 13.6 0.2 1 2 2.7e-05 0.01 10.3 0.0 4 37 484 516 482 524 0.79 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 2_16 - 877 MobB PF03205.9 140 0.001 13.6 0.2 2 2 0.034 13 0.3 0.0 25 64 696 733 691 745 0.86 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 78_1 - 53 ArsA_ATPase PF02374.10 305 0.0002 15.3 0.0 1 1 2.1e-06 0.0002 15.2 0.0 5 38 19 52 15 53 0.88 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 ArsA_ATPase PF02374.10 305 0.00056 13.8 0.0 1 1 6.8e-06 0.00065 13.6 0.0 5 38 50 83 46 84 0.87 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 ArsA_ATPase PF02374.10 305 0.0013 12.5 0.0 1 1 1.9e-05 0.0018 12.1 0.0 6 38 9 41 5 84 0.90 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 15_3 - 400 ArsA_ATPase PF02374.10 305 0.0021 11.9 0.0 1 1 9.8e-05 0.0094 9.8 0.0 5 42 112 156 109 173 0.74 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 78_1 - 53 PhoH PF02562.11 205 1.6e-07 25.5 0.0 1 1 2.9e-09 1.6e-07 25.5 0.0 8 47 4 43 1 49 0.85 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 10_5 - 950 PhoH PF02562.11 205 2.4e-07 25.0 0.0 1 2 0.0078 0.43 4.6 0.0 22 37 142 157 131 166 0.83 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 PhoH PF02562.11 205 2.4e-07 25.0 0.0 2 2 8.6e-07 4.7e-05 17.5 0.0 122 173 317 369 309 394 0.83 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 29_2 - 107 PhoH PF02562.11 205 2.8e-07 24.8 0.0 1 1 1.1e-08 5.8e-07 23.7 0.0 11 51 55 96 43 100 0.77 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 15_2 - 260 PhoH PF02562.11 205 4.1e-07 24.2 0.1 1 1 2.8e-08 1.6e-06 22.3 0.0 11 48 94 131 83 142 0.80 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 87_1 - 84 PhoH PF02562.11 205 1.6e-06 22.3 0.0 1 1 3.5e-08 1.9e-06 22.0 0.0 15 47 42 74 29 80 0.86 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 PhoH PF02562.11 205 5.7e-06 20.5 0.1 1 1 3.1e-07 1.7e-05 18.9 0.0 18 47 3 32 1 46 0.88 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 6_2 - 1210 PhoH PF02562.11 205 0.00023 15.2 0.1 1 1 1.5e-05 0.0008 13.5 0.1 4 61 421 482 418 496 0.85 # 246 # 3875 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.606 29_2 - 107 Ras PF00071.17 162 0.0029 11.8 0.0 1 1 1.3e-05 0.0052 11.0 0.0 2 28 66 92 65 104 0.85 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 68_1 - 173 AFG1_ATPase PF03969.11 362 2.6e-06 21.2 0.0 1 1 1.8e-08 3.5e-06 20.8 0.0 66 227 8 165 2 170 0.79 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 15_2 - 260 AFG1_ATPase PF03969.11 362 0.00032 14.4 0.1 1 1 4.2e-06 0.0008 13.0 0.1 63 216 103 254 41 259 0.73 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_19 - 107 T2SE PF00437.15 272 0.0029 11.3 0.0 1 1 8.1e-06 0.0031 11.2 0.0 108 154 55 98 27 103 0.81 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 66_1 - 159 Mur_ligase PF01225.20 83 0.0013 13.6 0.0 1 1 5.1e-06 0.002 13.0 0.0 8 49 60 107 58 138 0.78 # 117 # 593 # 1 # ID=66_1;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.532 31_3 - 72 Zeta_toxin PF06414.7 201 0.00011 16.1 0.0 1 1 1.7e-06 0.00013 15.9 0.0 98 135 13 50 2 52 0.94 # 1596 # 1811 # -1 # ID=31_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.444 10_5 - 950 Zeta_toxin PF06414.7 201 0.00071 13.5 0.1 1 1 4.8e-05 0.0037 11.2 0.0 12 46 134 168 125 175 0.74 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 4_7 - 742 Zeta_toxin PF06414.7 201 0.0008 13.3 0.0 1 1 0.00017 0.013 9.4 0.0 21 49 190 219 182 248 0.86 # 6907 # 9132 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 78_1 - 53 Zeta_toxin PF06414.7 201 0.0013 12.7 0.0 1 1 1.6e-05 0.0013 12.7 0.0 11 37 10 36 2 49 0.77 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 2_19 - 107 Zeta_toxin PF06414.7 201 0.0038 11.1 0.1 1 1 7e-05 0.0054 10.6 0.1 14 40 70 96 59 102 0.81 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_20 - 364 RNA_pol_Rpb2_45 PF10385.4 66 0.0014 13.3 0.2 1 1 1.1e-05 0.0043 11.7 0.2 10 38 294 322 286 332 0.82 # 13890 # 14981 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 15_3 - 400 VirC1 PF07015.6 231 5.8e-05 17.0 0.0 1 2 0.012 2.4 2.0 0.0 6 28 113 135 110 163 0.81 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 15_3 - 400 VirC1 PF07015.6 231 5.8e-05 17.0 0.0 2 2 6.3e-06 0.0012 12.7 0.0 51 136 210 297 206 344 0.87 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 7_6 - 215 VirC1 PF07015.6 231 0.0016 12.4 0.0 1 2 0.0015 0.28 5.0 0.0 3 29 3 29 1 36 0.81 # 3142 # 3786 # -1 # ID=7_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 7_6 - 215 VirC1 PF07015.6 231 0.0016 12.4 0.0 2 2 0.001 0.2 5.5 0.0 87 190 77 181 59 194 0.70 # 3142 # 3786 # -1 # ID=7_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 3_10 - 409 TIGR02432 TIGR02432 189 1.2e-06 23.0 0.0 1 1 4.9e-09 1.9e-06 22.4 0.0 2 43 32 73 31 101 0.83 # 8574 # 9800 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 5_5 - 431 Arch_ATPase PF01637.13 234 0.00031 15.3 0.0 1 1 5.7e-06 0.00074 14.0 0.0 25 129 157 253 140 264 0.65 # 4098 # 5390 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 68_1 - 173 Arch_ATPase PF01637.13 234 0.001 13.6 0.0 1 1 4.1e-05 0.0053 11.2 0.0 21 120 5 99 1 103 0.62 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 29_2 - 107 Arch_ATPase PF01637.13 234 0.0021 12.5 0.0 1 1 2.2e-05 0.0028 12.1 0.0 7 37 50 80 48 102 0.80 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 10_5 - 950 AAA_16 PF13191.1 185 1.2e-05 20.1 0.0 1 1 1.5e-06 7.4e-05 17.6 0.0 23 173 138 338 118 347 0.56 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 4_7 - 742 AAA_16 PF13191.1 185 1.7e-05 19.6 0.0 1 1 1.6e-06 7.6e-05 17.5 0.0 21 60 182 222 177 262 0.81 # 6907 # 9132 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 87_1 - 84 AAA_16 PF13191.1 185 2.1e-05 19.4 0.2 1 1 2.9e-06 0.00014 16.7 0.1 23 44 45 66 33 83 0.80 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 78_1 - 53 AAA_16 PF13191.1 185 3.6e-05 18.6 0.0 1 1 7.5e-07 3.6e-05 18.6 0.0 22 44 13 35 4 52 0.78 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_16 PF13191.1 185 6.9e-05 17.7 0.8 1 2 1.6e-05 0.00077 14.3 0.1 23 44 3 24 2 44 0.78 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 68_1 - 173 AAA_16 PF13191.1 185 6.9e-05 17.7 0.8 2 2 0.086 4.2 2.1 0.1 126 162 44 77 27 103 0.58 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 29_2 - 107 AAA_16 PF13191.1 185 0.00023 16.0 0.0 1 1 8.2e-06 0.0004 15.2 0.0 12 41 54 80 46 84 0.74 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 15_2 - 260 AAA_16 PF13191.1 185 0.00032 15.5 1.1 1 1 2.4e-05 0.0012 13.7 0.1 21 41 99 119 86 151 0.78 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_19 - 107 AAA_16 PF13191.1 185 0.0015 13.3 0.1 1 1 8.8e-05 0.0043 11.9 0.1 22 51 70 99 64 104 0.90 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 22_4 - 436 AAA_23 PF13476.1 202 0.087 7.9 8.2 1 1 0.00037 0.14 7.2 8.2 123 197 13 84 2 89 0.47 # 1834 # 3141 # 1 # ID=22_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 78_1 - 53 AAA_18 PF13238.1 129 0.00042 15.4 0.0 1 1 3.6e-06 0.00046 15.3 0.0 1 19 18 36 18 49 0.82 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 AAA_18 PF13238.1 129 0.00089 14.4 0.0 1 1 9.6e-06 0.0012 13.9 0.0 1 18 49 66 49 80 0.83 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_18 PF13238.1 129 0.0013 13.9 0.5 1 1 1.8e-05 0.0023 13.1 0.5 1 19 7 25 7 106 0.80 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 15_3 - 400 CbiA PF01656.18 195 1.1e-21 72.0 0.0 1 1 2.3e-23 1.7e-21 71.3 0.0 1 144 111 294 111 321 0.74 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 7_6 - 215 CbiA PF01656.18 195 4.7e-09 30.7 0.1 1 1 8.9e-11 6.9e-09 30.2 0.1 1 145 4 124 4 173 0.79 # 3142 # 3786 # -1 # ID=7_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 68_1 - 173 CbiA PF01656.18 195 0.00011 16.4 0.0 1 1 1.6e-06 0.00012 16.3 0.0 9 67 14 82 7 157 0.65 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 78_1 - 53 CbiA PF01656.18 195 0.00013 16.2 0.0 1 1 1.9e-06 0.00015 16.0 0.0 9 32 25 48 18 52 0.90 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 CbiA PF01656.18 195 0.00032 14.9 0.0 1 1 5.6e-06 0.00043 14.5 0.0 9 32 56 79 49 83 0.91 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 78_1 - 53 KaiC PF06745.8 227 0.0038 11.1 0.0 1 1 1.1e-05 0.0041 11.0 0.0 18 56 14 51 10 53 0.86 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_14 PF13173.1 128 1e-07 26.7 0.0 1 1 1.6e-09 1.6e-07 26.1 0.0 3 96 5 104 3 114 0.72 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 10_5 - 950 AAA_14 PF13173.1 128 7.1e-07 24.0 0.0 1 2 9.1e-05 0.0088 10.8 0.0 4 45 141 180 138 206 0.85 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 AAA_14 PF13173.1 128 7.1e-07 24.0 0.0 2 2 0.00022 0.021 9.6 0.0 30 101 278 353 263 360 0.66 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 15_2 - 260 AAA_14 PF13173.1 128 3e-06 22.0 0.0 1 1 5.9e-08 5.7e-06 21.1 0.0 2 96 102 203 101 220 0.69 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 78_1 - 53 AAA_14 PF13173.1 128 0.0044 11.7 0.0 1 1 4.6e-05 0.0045 11.7 0.0 3 38 16 52 14 53 0.75 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 29_2 - 107 AAA_29 PF13555.1 62 0.0026 12.1 0.0 1 1 3.4e-05 0.0044 11.4 0.0 18 39 58 79 50 84 0.77 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 15_2 - 260 AAA_29 PF13555.1 62 0.0029 12.0 0.0 1 1 4.3e-05 0.0055 11.1 0.0 19 59 98 139 89 141 0.72 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 78_1 - 53 AAA_29 PF13555.1 62 0.0035 11.7 0.0 1 1 3.6e-05 0.0046 11.3 0.0 17 39 10 31 4 51 0.82 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA PF00004.24 132 1.2e-08 30.1 0.0 1 1 2.4e-10 1.8e-08 29.5 0.0 1 74 7 81 7 109 0.73 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 15_2 - 260 AAA PF00004.24 132 8.7e-07 24.0 0.0 1 1 1.9e-08 1.5e-06 23.3 0.0 1 73 105 179 105 212 0.79 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 78_1 - 53 AAA PF00004.24 132 2.8e-05 19.1 0.1 1 1 4.2e-07 3.2e-05 19.0 0.1 1 21 18 38 18 51 0.82 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 AAA PF00004.24 132 6.7e-05 17.9 0.1 1 1 1.1e-06 8.9e-05 17.5 0.1 1 21 49 69 49 82 0.83 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 29_2 - 107 AAA PF00004.24 132 0.00084 14.4 0.0 1 1 1.7e-05 0.0013 13.7 0.0 1 30 66 95 66 103 0.78 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 68_1 - 173 Bac_DnaA PF00308.13 219 6.8e-12 40.3 0.0 1 1 1.2e-13 9.1e-12 39.8 0.0 37 139 7 106 2 119 0.89 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 15_2 - 260 Bac_DnaA PF00308.13 219 2.5e-09 31.9 0.0 1 1 4.8e-11 3.7e-09 31.3 0.0 37 136 105 202 75 207 0.85 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 78_1 - 53 Bac_DnaA PF00308.13 219 0.00042 14.8 0.0 1 1 5.5e-06 0.00042 14.8 0.0 35 70 16 49 2 53 0.70 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 29_2 - 107 Bac_DnaA PF00308.13 219 0.0005 14.6 0.0 1 1 8.2e-06 0.00064 14.2 0.0 36 64 65 93 35 99 0.79 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 87_1 - 84 Bac_DnaA PF00308.13 219 0.0014 13.1 0.0 1 1 1.8e-05 0.0014 13.1 0.0 35 70 47 80 18 84 0.73 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 10_5 - 950 UvrD_C PF13361.1 351 4.9e-07 24.3 0.0 1 2 0.0068 2.6 2.1 0.1 2 32 381 411 380 465 0.66 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 UvrD_C PF13361.1 351 4.9e-07 24.3 0.0 2 2 4.5e-08 1.7e-05 19.2 0.0 293 347 476 553 471 556 0.70 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 3_10 - 409 PAPS_reduct PF01507.14 174 7.3e-20 66.3 0.2 1 2 5.6e-12 2.2e-09 32.2 0.0 3 52 33 87 31 115 0.90 # 8574 # 9800 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 3_10 - 409 PAPS_reduct PF01507.14 174 7.3e-20 66.3 0.2 2 2 5.9e-12 2.3e-09 32.1 0.1 99 160 162 234 122 249 0.88 # 8574 # 9800 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 13_5 - 416 Sigma54_activat PF00158.21 168 1.8e-08 28.9 0.0 1 2 5.5e-08 4.3e-06 21.1 0.0 1 56 142 197 142 209 0.94 # 5484 # 6731 # 1 # ID=13_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 13_5 - 416 Sigma54_activat PF00158.21 168 1.8e-08 28.9 0.0 2 2 0.0057 0.44 4.8 0.1 89 153 211 264 203 279 0.61 # 5484 # 6731 # 1 # ID=13_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 15_2 - 260 Sigma54_activat PF00158.21 168 0.00034 14.9 0.0 1 1 3.5e-05 0.0027 12.0 0.0 18 60 98 140 83 198 0.67 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 68_1 - 173 Sigma54_activat PF00158.21 168 0.0012 13.1 0.1 1 1 0.0009 0.069 7.4 0.1 23 43 5 25 1 99 0.71 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 78_1 - 53 Sigma54_activat PF00158.21 168 0.0015 12.8 0.0 1 1 1.9e-05 0.0015 12.8 0.0 12 42 5 35 1 49 0.80 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 29_2 - 107 Sigma54_activat PF00158.21 168 0.002 12.4 0.0 1 1 4.2e-05 0.0032 11.7 0.0 18 42 59 83 42 97 0.79 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 29_2 - 107 DUF258 PF03193.11 161 3.7e-05 17.8 0.0 1 1 3.5e-07 4.5e-05 17.5 0.0 21 53 49 81 30 99 0.75 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 15_2 - 260 DUF258 PF03193.11 161 5.3e-05 17.3 0.0 1 1 6.3e-07 8.1e-05 16.7 0.0 21 78 88 157 70 184 0.70 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 87_1 - 84 DUF258 PF03193.11 161 0.0033 11.4 0.0 1 1 2.6e-05 0.0034 11.4 0.0 23 55 34 66 13 77 0.76 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 4_7 - 742 TraG-D_C PF12696.2 128 3.1e-20 67.2 0.0 1 1 1.4e-22 5.5e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 6907 # 9132 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 3_10 - 409 Asn_synthase PF00733.16 255 0.00011 16.6 0.0 1 1 5.3e-07 0.0002 15.7 0.0 19 58 31 70 13 329 0.88 # 8574 # 9800 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 16_4 - 754 TruB_N PF01509.13 149 0.0013 13.8 0.0 1 1 6.4e-06 0.0025 12.8 0.0 20 103 10 99 7 114 0.81 # 2447 # 4708 # 1 # ID=16_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 15_3 - 400 AAA_31 PF13614.1 157 2e-07 25.9 0.1 1 2 0.00078 0.075 7.8 0.0 3 44 111 158 109 210 0.86 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 15_3 - 400 AAA_31 PF13614.1 157 2e-07 25.9 0.1 2 2 2.8e-06 0.00027 15.7 0.0 108 148 235 274 233 279 0.87 # 1687 # 2886 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 78_1 - 53 AAA_31 PF13614.1 157 0.0014 13.4 0.0 1 1 1.5e-05 0.0015 13.3 0.0 10 38 24 52 11 53 0.93 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_31 PF13614.1 157 0.0017 13.1 0.1 1 1 5e-05 0.0049 11.6 0.1 10 40 13 43 8 102 0.82 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 87_1 - 84 AAA_31 PF13614.1 157 0.0039 11.9 0.0 1 1 5.4e-05 0.0052 11.5 0.0 10 38 55 83 49 84 0.92 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 NTPase_1 PF03266.10 168 0.0004 14.9 0.0 1 2 0.00064 0.12 6.8 0.0 2 17 7 22 6 36 0.79 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 68_1 - 173 NTPase_1 PF03266.10 168 0.0004 14.9 0.0 2 2 0.001 0.19 6.2 0.0 82 107 53 77 42 104 0.76 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 15_2 - 260 NTPase_1 PF03266.10 168 0.00082 13.9 0.1 1 2 0.0037 0.72 4.3 0.1 2 30 105 133 104 140 0.79 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 15_2 - 260 NTPase_1 PF03266.10 168 0.00082 13.9 0.1 2 2 0.00045 0.086 7.3 0.0 88 113 157 182 143 203 0.74 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 78_1 - 53 AAA_33 PF13671.1 143 0.00066 14.4 0.1 1 1 6.4e-06 0.00082 14.1 0.1 2 19 18 35 18 47 0.87 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_33 PF13671.1 143 0.00079 14.1 0.0 1 1 8.7e-06 0.0011 13.6 0.0 2 43 7 53 7 100 0.73 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 87_1 - 84 AAA_33 PF13671.1 143 0.0012 13.6 0.1 1 1 1.7e-05 0.0021 12.7 0.1 2 19 49 66 49 77 0.87 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 KTI12 PF08433.5 270 0.00098 13.2 0.0 1 1 8.9e-06 0.0017 12.4 0.0 4 82 7 77 6 108 0.78 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 78_1 - 53 KTI12 PF08433.5 270 0.0051 10.8 0.0 1 1 3.2e-05 0.0062 10.5 0.0 4 33 18 47 17 52 0.89 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 78_1 - 53 DnaB_C PF03796.10 259 0.0026 11.5 0.0 1 1 6.6e-06 0.0026 11.5 0.0 15 45 11 41 6 52 0.80 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 6_2 - 1210 AAA_30 PF13604.1 196 1.8e-42 139.9 1.6 1 1 8.4e-44 6.5e-42 138.1 1.6 1 187 421 610 421 614 0.94 # 246 # 3875 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.606 10_5 - 950 AAA_30 PF13604.1 196 0.00024 15.5 0.3 1 2 0.0016 0.12 6.7 0.0 7 35 133 156 127 189 0.72 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 AAA_30 PF13604.1 196 0.00024 15.5 0.3 2 2 0.0027 0.21 6.0 0.0 90 133 306 353 286 414 0.85 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 78_1 - 53 AAA_30 PF13604.1 196 0.0015 13.0 0.0 1 1 2e-05 0.0016 12.9 0.0 12 50 11 47 2 51 0.73 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 4_7 - 742 AAA_30 PF13604.1 196 0.0024 12.3 0.0 1 1 6.6e-05 0.0051 11.2 0.0 21 57 188 224 180 230 0.85 # 6907 # 9132 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 68_1 - 173 AAA_30 PF13604.1 196 0.0024 12.3 0.0 1 1 0.00025 0.019 9.3 0.0 21 55 7 41 1 103 0.79 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 2_19 - 107 FtsK_SpoIIIE PF01580.13 205 6.1e-06 20.6 0.0 1 1 3.7e-08 7.2e-06 20.4 0.0 20 66 52 100 35 103 0.79 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 2_16 - 877 FtsK_SpoIIIE PF01580.13 205 4e-05 18.0 0.1 1 2 4.1e-06 0.00078 13.7 0.0 39 63 477 505 464 508 0.84 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 2_16 - 877 FtsK_SpoIIIE PF01580.13 205 4e-05 18.0 0.1 2 2 0.022 4.2 1.6 0.0 75 166 531 626 530 637 0.80 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_19 - 581 KH_4 PF13083.1 73 0.00055 14.4 0.3 1 2 3.4e-05 0.013 10.0 0.0 24 64 286 327 273 334 0.80 # 12128 # 13870 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_19 - 581 KH_4 PF13083.1 73 0.00055 14.4 0.3 2 2 0.019 7.4 1.2 0.1 38 46 432 440 428 441 0.90 # 12128 # 13870 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 78_1 - 53 ABC_tran PF00005.22 137 0.00027 16.1 0.0 1 1 3.6e-06 0.00028 16.0 0.0 5 31 9 35 6 48 0.85 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 15_2 - 260 ABC_tran PF00005.22 137 0.00056 15.0 0.3 1 1 6e-05 0.0046 12.1 0.0 8 30 99 121 93 136 0.86 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 5_5 - 431 ABC_tran PF00005.22 137 0.00088 14.4 0.0 1 1 2.3e-05 0.0018 13.4 0.0 6 37 147 178 144 247 0.77 # 4098 # 5390 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 29_2 - 107 ABC_tran PF00005.22 137 0.00088 14.4 0.0 1 1 1.9e-05 0.0015 13.7 0.0 8 29 60 81 54 87 0.86 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 87_1 - 84 ABC_tran PF00005.22 137 0.0034 12.5 0.0 1 1 6.5e-05 0.005 12.0 0.0 8 31 43 66 41 78 0.86 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 29_2 - 107 TIGR03263 TIGR03263 180 0.0026 11.9 0.0 1 2 0.074 29 -1.3 0.0 138 173 19 53 7 58 0.62 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 29_2 - 107 TIGR03263 TIGR03263 180 0.0026 11.9 0.0 2 2 1.8e-05 0.0069 10.5 0.0 4 33 66 95 63 100 0.84 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 5_5 - 431 ATP-synt_ab PF00006.20 215 1.9e-71 234.8 0.0 1 1 7.5e-74 2.9e-71 234.2 0.0 1 215 138 349 138 349 1.00 # 4098 # 5390 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 68_1 - 173 RuvB_N PF05496.7 234 2.4e-05 18.3 0.2 1 1 3.8e-07 4.9e-05 17.3 0.2 50 119 4 83 1 95 0.70 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 78_1 - 53 RuvB_N PF05496.7 234 4.5e-05 17.4 0.0 1 1 3.5e-07 4.5e-05 17.4 0.0 47 70 12 35 3 50 0.79 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 RuvB_N PF05496.7 234 0.00017 15.5 0.0 1 1 1.3e-06 0.00017 15.5 0.0 48 70 44 66 16 79 0.84 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 78_1 - 53 AAA_19 PF13245.1 76 4.5e-08 27.6 0.0 1 1 8.8e-10 4.9e-08 27.5 0.0 10 49 16 50 5 53 0.81 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 AAA_19 PF13245.1 76 1.6e-07 25.9 0.1 1 1 4.3e-09 2.3e-07 25.3 0.1 12 49 48 81 36 84 0.84 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 6_2 - 1210 AAA_19 PF13245.1 76 2.9e-07 25.0 0.3 1 1 2e-08 1.1e-06 23.1 0.3 7 76 434 500 427 500 0.74 # 246 # 3875 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.606 68_1 - 173 AAA_19 PF13245.1 76 3.3e-07 24.8 0.0 1 1 1.5e-08 8.2e-07 23.6 0.0 13 52 7 42 2 63 0.86 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 10_5 - 950 AAA_19 PF13245.1 76 0.0016 13.0 0.0 1 1 9e-05 0.005 11.4 0.0 9 35 137 164 132 188 0.77 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 15_2 - 260 AAA_19 PF13245.1 76 0.0016 13.0 0.0 1 1 7.4e-05 0.0041 11.7 0.0 10 37 103 129 96 154 0.81 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 29_2 - 107 AAA_19 PF13245.1 76 0.0022 12.6 0.0 1 1 7.1e-05 0.0039 11.8 0.0 10 30 64 83 57 93 0.80 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 2_16 - 877 AAA_10 PF12846.2 304 9.9e-49 161.2 0.0 1 1 4e-50 1.7e-48 160.3 0.0 1 294 480 769 480 775 0.89 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 4_7 - 742 AAA_10 PF12846.2 304 5.5e-10 33.9 0.0 1 1 2.1e-10 8.9e-09 29.9 0.0 3 296 187 494 186 500 0.70 # 6907 # 9132 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 15_2 - 260 AAA_10 PF12846.2 304 3.2e-05 18.2 0.8 1 1 8.6e-06 0.00037 14.8 0.1 1 33 102 134 102 171 0.89 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_19 - 107 AAA_10 PF12846.2 304 3.6e-05 18.1 0.0 1 2 0.024 1 3.5 0.0 273 289 25 41 10 54 0.78 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 2_19 - 107 AAA_10 PF12846.2 304 3.6e-05 18.1 0.0 2 2 3.3e-05 0.0014 12.9 0.0 2 25 73 96 72 100 0.89 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 78_1 - 53 AAA_10 PF12846.2 304 5e-05 17.6 0.0 1 1 1.2e-06 5.2e-05 17.6 0.0 2 35 16 49 15 53 0.91 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 AAA_10 PF12846.2 304 0.00015 16.1 0.0 1 1 4e-06 0.00017 15.9 0.0 2 35 47 80 46 84 0.91 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_10 PF12846.2 304 0.00017 15.9 0.1 1 1 8.9e-06 0.00038 14.7 0.0 2 35 5 38 4 80 0.87 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 29_2 - 107 AAA_10 PF12846.2 304 0.00067 13.9 0.1 1 1 8.5e-05 0.0036 11.5 0.0 1 24 63 86 63 94 0.86 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 5_5 - 431 AAA_10 PF12846.2 304 0.00088 13.5 0.1 1 1 6.2e-05 0.0027 12.0 0.1 5 51 156 208 153 424 0.71 # 4098 # 5390 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 10_5 - 950 AAA_12 PF13087.1 200 0.00027 15.2 0.0 1 2 9.5e-05 0.037 8.2 0.1 3 90 365 451 364 466 0.77 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 AAA_12 PF13087.1 200 0.00027 15.2 0.0 2 2 0.0011 0.43 4.7 0.0 144 196 471 553 436 556 0.68 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 15_2 - 260 ResIII PF04851.10 184 0.0011 13.7 0.0 1 2 0.00014 0.027 9.1 0.0 8 50 89 127 50 135 0.78 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 15_2 - 260 ResIII PF04851.10 184 0.0011 13.7 0.0 2 2 0.011 2 3.0 0.0 112 164 131 187 125 204 0.72 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 29_2 - 107 ResIII PF04851.10 184 0.0023 12.6 0.0 1 1 1.7e-05 0.0033 12.1 0.0 8 51 50 89 11 99 0.79 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 10_5 - 950 Viral_helicase1 PF01443.13 234 6.1e-12 40.3 1.9 1 3 0.002 0.26 5.5 0.0 2 23 143 166 142 204 0.79 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 Viral_helicase1 PF01443.13 234 6.1e-12 40.3 1.9 2 3 2e-10 2.6e-08 28.5 0.2 35 202 288 490 270 498 0.82 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 Viral_helicase1 PF01443.13 234 6.1e-12 40.3 1.9 3 3 0.0063 0.81 3.9 0.1 212 232 532 552 524 554 0.75 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 6_2 - 1210 Viral_helicase1 PF01443.13 234 0.0019 12.5 0.0 1 2 0.00064 0.082 7.2 0.0 1 23 441 464 441 598 0.75 # 246 # 3875 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.606 6_2 - 1210 Viral_helicase1 PF01443.13 234 0.0019 12.5 0.0 2 2 0.013 1.7 2.9 0.0 178 234 844 900 795 900 0.67 # 246 # 3875 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.606 68_1 - 173 Viral_helicase1 PF01443.13 234 0.0029 11.9 0.0 1 1 3.6e-05 0.0046 11.3 0.0 3 75 9 78 7 88 0.78 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 10_5 - 950 DUF2075 PF09848.4 352 3.4e-07 24.3 2.0 1 3 0.00041 0.16 5.7 0.0 5 25 143 163 141 214 0.78 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 DUF2075 PF09848.4 352 3.4e-07 24.3 2.0 2 3 3.1e-05 0.012 9.4 0.0 76 224 307 455 245 465 0.79 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 DUF2075 PF09848.4 352 3.4e-07 24.3 2.0 3 3 0.00021 0.079 6.7 0.0 316 349 521 553 510 556 0.77 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 68_1 - 173 TIP49 PF06068.8 398 0.00048 13.7 0.1 1 2 0.00012 0.022 8.2 0.1 52 71 6 25 3 63 0.80 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 68_1 - 173 TIP49 PF06068.8 398 0.00048 13.7 0.1 2 2 0.0027 0.53 3.7 0.0 295 356 88 144 64 152 0.72 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 78_1 - 53 TIP49 PF06068.8 398 0.0023 11.5 0.0 1 1 1.2e-05 0.0023 11.4 0.0 52 71 17 36 11 52 0.75 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 DEAD PF00270.24 169 0.00095 13.5 0.1 1 1 2.1e-05 0.0083 10.4 0.1 14 64 4 51 1 110 0.65 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 4_7 - 742 TrwB_AAD_bind PF10412.4 386 1.2e-149 492.9 0.0 1 1 1.1e-151 1.4e-149 492.6 0.0 2 386 172 561 171 561 0.99 # 6907 # 9132 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 2_16 - 877 TrwB_AAD_bind PF10412.4 386 1.6e-06 21.8 0.1 1 2 7.2e-08 9.2e-06 19.2 0.0 15 53 480 518 471 548 0.80 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 2_16 - 877 TrwB_AAD_bind PF10412.4 386 1.6e-06 21.8 0.1 2 2 0.061 7.9 -0.3 0.0 261 317 714 770 686 773 0.92 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 2_19 - 107 TrwB_AAD_bind PF10412.4 386 0.00045 13.7 0.0 1 2 0.049 6.3 0.0 0.0 294 331 24 61 16 68 0.71 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 2_19 - 107 TrwB_AAD_bind PF10412.4 386 0.00045 13.7 0.0 2 2 9.8e-06 0.0013 12.2 0.0 5 42 62 99 58 103 0.88 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 6_2 - 1210 AAA_11 PF13086.1 236 0.00024 15.5 3.3 1 1 3.5e-06 0.00067 14.1 0.0 2 75 422 492 421 513 0.80 # 246 # 3875 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.606 78_1 - 53 AAA_11 PF13086.1 236 0.00095 13.6 0.0 1 1 4.9e-06 0.00095 13.6 0.0 6 39 5 37 1 49 0.73 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 13_5 - 416 Sigma54_activ_2 PF14532.1 138 1.6e-18 61.9 0.0 1 1 1.3e-20 2.6e-18 61.2 0.0 1 133 143 278 143 283 0.90 # 5484 # 6731 # 1 # ID=13_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 68_1 - 173 Sigma54_activ_2 PF14532.1 138 0.0023 12.8 0.0 1 1 3.3e-05 0.0064 11.4 0.0 21 111 4 108 1 133 0.70 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 4_7 - 742 T4SS-DNA_transf PF02534.9 469 2.5e-09 31.0 0.0 1 1 3.9e-11 7.5e-09 29.4 0.0 264 361 382 476 198 500 0.82 # 6907 # 9132 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 2_16 - 877 T4SS-DNA_transf PF02534.9 469 0.00023 14.6 0.0 1 2 0.00085 0.16 5.2 0.0 105 185 534 608 471 624 0.86 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 2_16 - 877 T4SS-DNA_transf PF02534.9 469 0.00023 14.6 0.0 2 2 0.00022 0.042 7.1 0.0 319 378 712 770 664 772 0.90 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 78_1 - 53 ArgK PF03308.11 267 2.7e-05 17.8 0.0 1 1 2.2e-07 2.8e-05 17.8 0.0 26 66 12 52 5 53 0.87 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 ArgK PF03308.11 267 8.3e-05 16.3 0.0 1 1 6.9e-07 8.9e-05 16.2 0.0 27 66 44 83 27 84 0.84 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 ArgK PF03308.11 267 0.00037 14.1 0.1 1 1 6.2e-06 0.0008 13.0 0.0 28 66 3 41 1 44 0.88 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 2_19 - 107 Pox_A32 PF04665.7 241 0.00043 14.4 0.0 1 1 7.9e-06 0.001 13.2 0.0 7 42 66 101 60 104 0.89 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 10_5 - 950 Pox_A32 PF04665.7 241 0.0016 12.5 0.0 1 1 2.7e-05 0.0035 11.4 0.0 6 34 132 160 127 173 0.86 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 2_16 - 877 Pox_A32 PF04665.7 241 0.0033 11.5 0.0 1 1 6.9e-05 0.0089 10.1 0.0 7 38 474 505 470 520 0.85 # 8376 # 11006 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 16_4 - 754 Plug PF07715.10 108 5.7e-10 34.3 4.8 1 1 1.5e-12 5.7e-10 34.3 4.8 13 107 61 166 43 167 0.89 # 2447 # 4708 # 1 # ID=16_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 2_19 - 107 RNA_helicase PF00910.17 107 0.00046 15.2 0.0 1 1 5.2e-06 0.001 14.1 0.0 1 29 75 103 75 106 0.91 # 12285 # 12605 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 78_1 - 53 RNA_helicase PF00910.17 107 0.0044 12.0 0.0 1 1 2.7e-05 0.0053 11.8 0.0 1 19 18 36 18 46 0.84 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 78_1 - 53 AAA_24 PF13479.1 213 0.00036 15.0 0.0 1 1 3.7e-06 0.00036 15.0 0.0 5 23 17 35 13 50 0.84 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 AAA_24 PF13479.1 213 0.00071 14.0 0.0 1 1 1.1e-05 0.001 13.5 0.0 5 23 48 66 44 80 0.84 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_24 PF13479.1 213 0.0013 13.1 0.0 1 1 2.5e-05 0.0024 12.2 0.0 5 23 6 24 2 72 0.87 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 29_2 - 107 AAA_24 PF13479.1 213 0.0021 12.5 0.0 1 1 2.8e-05 0.0027 12.1 0.0 3 23 63 83 61 96 0.82 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 10_5 - 950 UvrD-helicase PF00580.16 315 3e-10 34.7 0.7 1 2 3.6e-05 0.014 9.5 0.0 9 34 135 160 128 166 0.77 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 10_5 - 950 UvrD-helicase PF00580.16 315 3e-10 34.7 0.7 2 2 3.8e-09 1.5e-06 22.5 0.1 253 296 311 354 284 358 0.87 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 68_1 - 173 NACHT PF05729.7 166 0.00018 16.0 0.5 1 2 9.9e-05 0.0095 10.4 0.1 3 20 7 24 5 37 0.85 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 68_1 - 173 NACHT PF05729.7 166 0.00018 16.0 0.5 2 2 0.008 0.77 4.2 0.0 56 128 42 105 30 126 0.73 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 78_1 - 53 NACHT PF05729.7 166 0.0009 13.7 0.0 1 1 9.9e-06 0.00095 13.7 0.0 3 20 18 35 16 50 0.82 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 10_5 - 950 NACHT PF05729.7 166 0.0016 12.9 0.2 1 1 0.00011 0.01 10.3 0.0 3 27 142 166 140 200 0.81 # 4740 # 7589 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 87_1 - 84 NACHT PF05729.7 166 0.002 12.6 0.0 1 1 2.8e-05 0.0027 12.2 0.0 3 20 49 66 47 80 0.83 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 AAA_25 PF13481.1 194 1.2e-06 22.9 0.0 1 1 1.6e-08 1.2e-06 22.8 0.0 18 63 26 77 8 83 0.75 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 78_1 - 53 AAA_25 PF13481.1 194 3e-06 21.6 0.0 1 1 4.3e-08 3.3e-06 21.4 0.0 32 63 14 46 9 52 0.83 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_25 PF13481.1 194 5.5e-06 20.7 0.1 1 1 1e-07 7.8e-06 20.2 0.1 32 66 3 39 1 128 0.72 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 29_2 - 107 AAA_25 PF13481.1 194 8.2e-05 16.9 0.0 1 1 1.3e-06 0.0001 16.5 0.0 20 55 49 85 31 90 0.79 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 15_2 - 260 AAA_25 PF13481.1 194 9.9e-05 16.6 0.0 1 1 2.2e-06 0.00017 15.9 0.0 22 58 90 127 71 176 0.79 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 68_1 - 173 AAA_28 PF13521.1 163 6e-05 17.8 0.2 1 2 4e-05 0.0038 12.0 0.1 2 26 7 35 6 54 0.72 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 68_1 - 173 AAA_28 PF13521.1 163 6e-05 17.8 0.2 2 2 0.009 0.87 4.3 0.0 95 140 51 90 39 107 0.71 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 78_1 - 53 AAA_28 PF13521.1 163 0.0006 14.6 0.0 1 1 6.9e-06 0.00066 14.5 0.0 2 20 18 36 17 50 0.77 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 87_1 - 84 AAA_28 PF13521.1 163 0.0012 13.6 0.0 1 1 2.1e-05 0.002 12.9 0.0 2 20 49 67 48 80 0.79 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 15_2 - 260 AAA_28 PF13521.1 163 0.0056 11.5 1.6 1 1 0.00012 0.012 10.4 0.2 1 43 104 151 104 169 0.69 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 78_1 - 53 AAA_5 PF07728.9 139 4.9e-05 17.9 0.0 1 1 6.4e-07 4.9e-05 17.9 0.0 1 19 17 35 17 53 0.81 # 2 # 160 # -1 # ID=78_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 68_1 - 173 AAA_5 PF07728.9 139 6.7e-05 17.5 0.9 1 2 5.8e-06 0.00045 14.8 0.8 1 19 6 24 6 98 0.82 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 68_1 - 173 AAA_5 PF07728.9 139 6.7e-05 17.5 0.9 2 2 0.073 5.6 1.5 0.0 65 77 65 77 27 128 0.66 # 60 # 578 # -1 # ID=68_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 87_1 - 84 AAA_5 PF07728.9 139 0.00012 16.7 0.0 1 1 1.8e-06 0.00014 16.4 0.0 1 18 48 65 48 84 0.83 # 2 # 253 # 1 # ID=87_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 15_2 - 260 AAA_5 PF07728.9 139 0.00016 16.2 0.2 1 1 1.8e-05 0.0014 13.2 0.2 1 74 104 173 104 183 0.73 # 181 # 960 # 1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 29_2 - 107 AAA_5 PF07728.9 139 0.0025 12.4 0.1 1 1 7.6e-05 0.0058 11.2 0.1 1 16 65 80 65 85 0.89 # 643 # 963 # 1 # ID=29_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/c69c882a-32b7-45ae-9e5d-c406a9977d9f # Target file: checkm_output/bins/pm619/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm619/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c69c882a-32b7-45ae-9e5d-c406a9977d9f checkm_output/bins/pm619/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:07:58 2020 # [ok]