# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_14 - 1216 UPF0020 PF01170.13 180 2.4e-08 27.3 0.0 1 2 1.9e-08 3.1e-06 20.5 0.0 31 75 307 360 300 368 0.78 # 11853 # 15500 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 2_14 - 1216 UPF0020 PF01170.13 180 2.4e-08 27.3 0.0 2 2 0.0019 0.31 4.2 0.0 89 118 490 515 475 534 0.69 # 11853 # 15500 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 13_3 - 207 cobW PF02492.14 178 0.00041 13.4 0.2 1 2 3.7e-05 0.003 10.6 0.0 10 38 12 41 3 47 0.86 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 13_3 - 207 cobW PF02492.14 178 0.00041 13.4 0.2 2 2 0.039 3.2 0.7 0.1 114 146 115 147 71 170 0.78 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 10_4 - 181 cobW PF02492.14 178 0.0014 11.7 0.0 1 1 2.6e-05 0.0022 11.1 0.0 2 22 2 22 1 30 0.79 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_3 - 260 IstB_IS21 PF01695.12 178 2.3e-72 235.7 0.1 1 2 0.098 8.1 -0.6 0.0 64 97 25 57 24 61 0.64 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 4_3 - 260 IstB_IS21 PF01695.12 178 2.3e-72 235.7 0.1 2 2 6e-74 4.9e-72 234.7 0.0 1 178 56 235 56 235 0.98 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 2_12 - 692 IstB_IS21 PF01695.12 178 0.00022 14.3 0.0 1 1 6.2e-06 0.00051 13.1 0.0 41 63 227 249 210 252 0.86 # 7044 # 9119 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 13_3 - 207 MipZ PF09140.6 261 3e-14 46.3 0.9 1 2 2.6e-11 2.2e-09 30.4 0.0 2 47 3 47 2 57 0.88 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 13_3 - 207 MipZ PF09140.6 261 3e-14 46.3 0.9 2 2 1.6e-06 0.00013 14.6 0.3 96 141 73 118 52 146 0.85 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 1_1 - 389 MipZ PF09140.6 261 7.1e-06 18.8 0.3 1 2 7e-06 0.00058 12.6 0.0 2 47 108 153 107 157 0.87 # 739 # 1905 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 1_1 - 389 MipZ PF09140.6 261 7.1e-06 18.8 0.3 2 2 0.0023 0.19 4.3 0.0 88 134 224 270 197 292 0.85 # 739 # 1905 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 1_13 - 636 DUF87 PF01935.12 229 6.5e-06 19.7 0.0 1 1 1.4e-07 1.1e-05 18.9 0.0 8 63 174 228 169 273 0.86 # 11303 # 13210 # -1 # ID=1_13;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_20 - 350 DUF87 PF01935.12 229 0.00039 13.9 0.0 1 1 7.7e-06 0.00063 13.2 0.0 28 47 173 192 152 201 0.89 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 4_3 - 260 AAA_22 PF13401.1 131 3.9e-06 20.7 0.2 1 2 0.0001 0.0034 11.2 0.0 5 22 103 120 99 137 0.83 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 4_3 - 260 AAA_22 PF13401.1 131 3.9e-06 20.7 0.2 2 2 0.0027 0.09 6.5 0.0 88 103 155 181 126 203 0.67 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 10_4 - 181 AAA_22 PF13401.1 131 2.8e-05 17.9 0.0 1 1 1.7e-06 5.5e-05 17.0 0.0 6 37 2 34 1 177 0.84 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_20 - 350 AAA_22 PF13401.1 131 4.4e-05 17.2 0.0 1 1 2.6e-06 8.5e-05 16.3 0.0 3 30 167 194 165 249 0.76 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 7_2 - 736 AAA_22 PF13401.1 131 0.00037 14.3 0.1 1 1 4.9e-05 0.0016 12.2 0.0 3 69 342 426 340 497 0.58 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 13_4 - 167 AAA_22 PF13401.1 131 0.00057 13.7 0.3 1 1 2.4e-05 0.00078 13.2 0.3 78 123 58 106 5 123 0.81 # 1594 # 2094 # 1 # ID=13_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.485 13_3 - 207 DUF1611 PF07755.6 301 6.2e-06 18.6 0.3 1 1 5.8e-08 9.5e-06 18.0 0.3 124 200 13 90 11 106 0.86 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 13_3 - 207 ATP_bind_1 PF03029.12 238 7.7e-05 15.9 0.0 1 1 1.7e-06 0.00014 15.1 0.0 6 42 12 48 10 74 0.85 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 1_20 - 350 ATP_bind_1 PF03029.12 238 0.00034 13.8 0.0 1 1 6.2e-06 0.00051 13.2 0.0 1 23 173 195 173 202 0.89 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 2_12 - 692 ChlI PF13541.1 121 3.8e-06 20.1 0.2 1 1 7.6e-08 1.3e-05 18.4 0.0 62 120 598 656 570 657 0.89 # 7044 # 9119 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 12_3 - 478 DNA_methylase PF00145.12 335 3.5e-79 259.9 0.0 1 1 4.4e-81 7.3e-79 258.8 0.0 1 331 96 457 96 460 0.86 # 512 # 1945 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.480 13_3 - 207 SRP54 PF00448.17 196 0.00017 14.6 0.4 1 1 3.6e-06 0.00059 12.9 0.3 11 54 12 50 2 142 0.73 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 2_16 - 1226 KAP_NTPase PF07693.9 325 0.00013 14.6 0.0 1 1 2.6e-06 0.00043 12.9 0.0 15 71 62 152 50 224 0.82 # 17296 # 20973 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 6_6 - 363 AAA_15 PF13175.1 415 4.9e-14 45.7 0.0 1 2 3.6e-10 6e-08 25.7 0.0 2 56 3 55 2 148 0.74 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 6_6 - 363 AAA_15 PF13175.1 415 4.9e-14 45.7 0.0 2 2 5.8e-08 9.6e-06 18.4 0.0 372 415 294 335 259 335 0.88 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 10_4 - 181 AAA_17 PF13207.1 121 1e-06 23.2 0.1 1 1 2.3e-08 1.9e-06 22.3 0.1 1 77 2 94 2 173 0.54 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 13_3 - 207 AAA_17 PF13207.1 121 0.00014 16.3 0.0 1 1 2.3e-06 0.00019 15.9 0.0 9 80 12 86 11 171 0.71 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 6_6 - 363 AAA_21 PF13304.1 303 8.7e-31 101.5 0.0 1 1 7.6e-32 4.2e-30 99.3 0.0 1 301 23 334 23 336 0.76 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 7_2 - 736 AAA_21 PF13304.1 303 0.00026 14.6 0.1 1 1 4.8e-06 0.00026 14.6 0.1 2 145 346 491 345 499 0.82 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 2_16 - 1226 AAA_21 PF13304.1 303 0.075 6.5 8.7 1 1 6.1e-05 0.0033 11.0 0.6 9 74 77 142 77 246 0.47 # 17296 # 20973 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 13_3 - 207 MobB PF03205.9 140 4.3e-06 20.1 0.4 1 1 2.7e-07 2.2e-05 17.8 0.1 10 104 12 88 2 104 0.68 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 1_20 - 350 MobB PF03205.9 140 0.00011 15.6 0.0 1 1 2.5e-06 0.00021 14.6 0.0 2 27 170 194 169 206 0.81 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 13_3 - 207 LpxK PF02606.9 326 8.8e-05 15.1 0.1 1 1 8.4e-07 0.00014 14.5 0.1 46 71 11 36 2 38 0.94 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 13_3 - 207 ArsA_ATPase PF02374.10 305 4.8e-08 26.0 0.2 1 1 9.7e-10 8e-08 25.2 0.2 5 45 6 46 1 66 0.90 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 1_1 - 389 ArsA_ATPase PF02374.10 305 3e-06 20.1 0.4 1 2 3.3e-06 0.00027 13.6 0.1 9 36 115 142 109 151 0.89 # 739 # 1905 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 1_1 - 389 ArsA_ATPase PF02374.10 305 3e-06 20.1 0.4 2 2 0.0022 0.18 4.3 0.0 123 136 231 244 221 251 0.84 # 739 # 1905 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 4_3 - 260 PhoH PF02562.11 205 3.2e-08 26.6 0.3 1 2 0.013 1.1 2.1 0.0 48 111 5 67 1 77 0.79 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 4_3 - 260 PhoH PF02562.11 205 3.2e-08 26.6 0.3 2 2 9.2e-09 7.6e-07 22.1 0.0 11 48 94 131 84 145 0.81 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 7_2 - 736 PhoH PF02562.11 205 8.3e-06 18.7 0.0 1 1 2.3e-07 1.9e-05 17.5 0.0 11 85 335 408 332 431 0.78 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 1_20 - 350 T2SE PF00437.15 272 3e-49 160.9 0.0 1 1 4.7e-51 3.9e-49 160.5 0.0 7 267 26 318 21 322 0.93 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_28 - 917 T2SE PF00437.15 272 0.00046 12.7 0.0 1 1 1.1e-05 0.00087 11.8 0.0 114 155 512 562 379 565 0.67 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 10_4 - 181 Cytidylate_kin2 PF13189.1 179 0.00076 13.0 0.0 1 2 6.6e-05 0.011 9.3 0.0 1 23 2 24 2 46 0.78 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 10_4 - 181 Cytidylate_kin2 PF13189.1 179 0.00076 13.0 0.0 2 2 0.015 2.5 1.6 0.0 112 135 99 122 91 136 0.77 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 10_4 - 181 Zeta_toxin PF06414.7 201 7.4e-05 15.5 0.0 1 2 9.4e-06 0.00077 12.2 0.0 19 53 3 35 1 120 0.83 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 10_4 - 181 Zeta_toxin PF06414.7 201 7.4e-05 15.5 0.0 2 2 0.048 3.9 0.1 0.0 45 74 106 133 95 150 0.73 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_20 - 350 Zeta_toxin PF06414.7 201 0.0016 11.2 0.0 1 1 4.4e-05 0.0036 10.0 0.0 17 48 169 201 160 224 0.79 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 6_6 - 363 SMC_N PF02463.14 220 2e-15 50.2 0.0 1 2 9.6e-12 1.6e-09 30.9 0.0 1 50 1 46 1 59 0.83 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 6_6 - 363 SMC_N PF02463.14 220 2e-15 50.2 0.0 2 2 9.3e-08 1.5e-05 17.9 0.0 138 207 273 340 73 356 0.83 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 13_3 - 207 VirC1 PF07015.6 231 1.2e-14 47.5 0.2 1 1 3e-16 2.4e-14 46.5 0.2 1 131 1 123 1 174 0.79 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 1_1 - 389 VirC1 PF07015.6 231 9.4e-05 15.2 0.0 1 2 0.00056 0.046 6.3 0.0 4 42 109 147 107 154 0.91 # 739 # 1905 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 1_1 - 389 VirC1 PF07015.6 231 9.4e-05 15.2 0.0 2 2 0.00052 0.043 6.5 0.0 84 139 235 290 220 316 0.77 # 739 # 1905 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 13_3 - 207 Fer4_NifH PF00142.13 273 2.6e-06 20.4 0.0 1 1 2.8e-08 4.5e-06 19.6 0.0 8 64 10 66 3 89 0.90 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 4_3 - 260 Arch_ATPase PF01637.13 234 0.0014 11.9 0.1 1 1 2.5e-05 0.0041 10.4 0.1 8 38 90 120 87 201 0.81 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_28 - 917 AAA_16 PF13191.1 185 2.5e-05 17.9 0.0 1 1 5.5e-06 0.00023 14.8 0.0 19 166 530 769 520 785 0.54 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 7_2 - 736 AAA_16 PF13191.1 185 9.1e-05 16.1 2.1 1 1 7.6e-06 0.00031 14.4 0.0 24 49 343 368 331 384 0.87 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 4_3 - 260 AAA_16 PF13191.1 185 0.00013 15.5 0.9 1 1 8e-06 0.00033 14.3 0.1 9 41 90 119 87 191 0.83 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_20 - 350 AAA_16 PF13191.1 185 0.00079 13.0 0.0 1 1 3.1e-05 0.0013 12.4 0.0 25 51 169 195 164 261 0.86 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 6_6 - 363 AAA_23 PF13476.1 202 1.3e-11 38.8 0.0 1 1 3.2e-13 1.7e-11 38.4 0.0 2 43 5 45 4 156 0.86 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_28 - 917 AAA_23 PF13476.1 202 0.00057 13.8 0.0 1 1 2.2e-05 0.0012 12.8 0.0 18 78 534 593 519 646 0.66 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 3_11 - 462 AAA_23 PF13476.1 202 0.012 9.6 4.6 1 2 0.001 0.056 7.3 1.3 106 198 122 233 62 244 0.68 # 10600 # 11985 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 3_11 - 462 AAA_23 PF13476.1 202 0.012 9.6 4.6 2 2 0.016 0.9 3.4 0.1 144 191 349 403 303 437 0.61 # 10600 # 11985 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 10_4 - 181 AAA_18 PF13238.1 129 1.1e-10 35.5 0.0 1 1 2.4e-12 2e-10 34.7 0.0 1 126 3 134 3 137 0.71 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 7_2 - 736 AAA_18 PF13238.1 129 0.00028 14.8 0.3 1 1 4e-05 0.0033 11.4 0.0 1 42 346 387 346 456 0.75 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 6_6 - 363 AAA_13 PF13166.1 712 8.6e-05 14.7 0.0 1 1 7.2e-07 0.00012 14.2 0.0 12 39 17 44 7 73 0.77 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_1 - 389 CbiA PF01656.18 195 8.6e-37 120.0 0.0 1 1 1.4e-38 1.1e-36 119.6 0.0 2 194 110 339 109 340 0.80 # 739 # 1905 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 13_3 - 207 CbiA PF01656.18 195 1.7e-28 92.9 1.6 1 1 5.3e-30 4.4e-28 91.6 1.6 1 142 4 123 4 163 0.77 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 4_3 - 260 AAA_14 PF13173.1 128 1.1e-06 22.2 0.0 1 1 2.4e-08 2e-06 21.4 0.0 2 96 102 203 101 221 0.67 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 10_4 - 181 AAA_14 PF13173.1 128 0.00098 12.7 0.0 1 1 2.3e-05 0.0019 11.7 0.0 4 27 2 25 1 54 0.79 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_28 - 917 AAA_29 PF13555.1 62 2.6e-05 17.4 0.0 1 1 1.6e-06 6.5e-05 16.1 0.0 18 47 531 559 516 574 0.77 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 6_6 - 363 AAA_29 PF13555.1 62 0.00021 14.5 0.0 1 1 1.4e-05 0.00057 13.0 0.0 14 58 12 55 2 60 0.69 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_20 - 350 AAA_29 PF13555.1 62 0.00056 13.1 0.0 1 1 3e-05 0.0013 12.0 0.0 23 40 168 185 160 191 0.85 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 4_3 - 260 AAA_29 PF13555.1 62 0.0013 12.0 0.0 1 1 5.8e-05 0.0024 11.1 0.0 19 59 98 139 89 141 0.72 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 4_3 - 260 AAA PF00004.24 132 2.5e-07 24.6 0.0 1 1 5.2e-09 4.3e-07 23.8 0.0 1 74 105 180 105 214 0.77 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 7_2 - 736 AAA PF00004.24 132 0.0035 11.2 2.2 1 1 0.00036 0.029 8.2 0.0 1 24 346 371 346 445 0.76 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 4_3 - 260 Bac_DnaA PF00308.13 219 2.1e-09 30.9 0.0 1 1 1.9e-11 3.1e-09 30.4 0.0 36 136 104 202 75 207 0.85 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 4_3 - 260 Sigma54_activat PF00158.21 168 0.00013 15.1 0.1 1 1 4.8e-06 0.00079 12.5 0.1 18 68 98 148 82 199 0.69 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 2_14 - 1216 N6_Mtase PF02384.11 311 5e-13 42.3 0.1 1 2 6.5e-08 1.1e-05 18.3 0.0 40 102 299 371 262 388 0.81 # 11853 # 15500 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 2_14 - 1216 N6_Mtase PF02384.11 311 5e-13 42.3 0.1 2 2 6.8e-09 1.1e-06 21.5 0.0 122 217 500 593 468 613 0.77 # 11853 # 15500 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 4_3 - 260 DUF258 PF03193.11 161 1.5e-05 17.8 0.0 1 1 1.4e-07 2.4e-05 17.2 0.0 22 80 89 159 70 194 0.71 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_13 - 636 TraG-D_C PF12696.2 128 9.7e-10 32.0 0.0 1 1 1.8e-11 1.5e-09 31.4 0.0 7 94 406 496 400 527 0.77 # 11303 # 13210 # -1 # ID=1_13;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_28 - 917 TraG-D_C PF12696.2 128 0.0003 14.3 0.1 1 1 7.3e-06 0.0006 13.3 0.1 1 72 753 825 753 831 0.83 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 1_1 - 389 AAA_31 PF13614.1 157 1.6e-09 31.5 0.0 1 2 2.8e-08 2.3e-06 21.2 0.0 2 49 108 155 107 195 0.92 # 739 # 1905 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 1_1 - 389 AAA_31 PF13614.1 157 1.6e-09 31.5 0.0 2 2 0.00036 0.03 7.9 0.1 110 152 227 268 223 272 0.84 # 739 # 1905 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 13_3 - 207 AAA_31 PF13614.1 157 2.9e-08 27.4 0.3 1 2 1.9e-08 1.5e-06 21.8 0.0 1 39 2 40 2 57 0.93 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 13_3 - 207 AAA_31 PF13614.1 157 2.9e-08 27.4 0.3 2 2 0.0093 0.77 3.3 0.0 115 152 74 109 58 114 0.83 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 4_3 - 260 NTPase_1 PF03266.10 168 0.00025 14.4 0.2 1 2 0.0032 0.26 4.5 0.1 2 30 105 133 104 153 0.83 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 4_3 - 260 NTPase_1 PF03266.10 168 0.00025 14.4 0.2 2 2 0.00032 0.026 7.8 0.0 88 112 157 181 144 203 0.73 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 13_3 - 207 NTPase_1 PF03266.10 168 0.00061 13.1 0.1 1 1 2.3e-05 0.0019 11.5 0.0 7 58 10 66 5 94 0.80 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 10_4 - 181 AAA_33 PF13671.1 143 9.5e-11 35.4 0.0 1 1 7.3e-13 1.2e-10 35.0 0.0 2 127 3 130 2 151 0.75 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 7_2 - 736 DnaB_C PF03796.10 259 0.0027 10.2 5.2 1 3 0.056 9.3 -1.4 0.8 110 237 205 249 163 269 0.53 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 7_2 - 736 DnaB_C PF03796.10 259 0.0027 10.2 5.2 2 3 4e-05 0.0067 8.9 0.0 12 43 336 367 331 377 0.84 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 7_2 - 736 DnaB_C PF03796.10 259 0.0027 10.2 5.2 3 3 0.0038 0.63 2.4 0.0 88 148 435 496 419 507 0.76 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 2_14 - 1216 Methyltransf_26 PF13659.1 117 1.8e-16 53.9 0.0 1 1 4.2e-18 6.9e-16 52.0 0.0 3 116 307 561 305 562 0.74 # 11853 # 15500 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 13_3 - 207 AAA_30 PF13604.1 196 0.00057 13.1 0.4 1 1 1.5e-05 0.0012 12.0 0.1 26 106 10 88 2 97 0.75 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 6_6 - 363 AAA_30 PF13604.1 196 0.0014 11.8 0.0 1 1 3.5e-05 0.0028 10.8 0.0 15 55 18 59 9 91 0.77 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_20 - 350 FtsK_SpoIIIE PF01580.13 205 0.0012 11.9 0.0 1 1 2.2e-05 0.0018 11.4 0.0 41 59 171 189 158 224 0.87 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_28 - 917 FtsK_SpoIIIE PF01580.13 205 0.0014 11.7 0.0 1 1 3.9e-05 0.0032 10.6 0.0 15 56 505 553 495 563 0.68 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 6_6 - 363 DUF2813 PF11398.3 373 1.5e-07 24.4 0.3 1 2 6.9e-08 1.1e-05 18.2 0.0 5 50 4 49 1 56 0.88 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 6_6 - 363 DUF2813 PF11398.3 373 1.5e-07 24.4 0.3 2 2 0.0012 0.2 4.2 0.1 288 310 295 317 287 342 0.75 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 2_12 - 692 Lon_C PF05362.8 205 1.2e-16 54.3 0.0 1 1 1.4e-18 2.2e-16 53.3 0.0 44 200 529 686 505 690 0.86 # 7044 # 9119 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 6_6 - 363 ABC_tran PF00005.22 137 1.3e-06 22.4 0.0 1 1 6e-07 2.5e-05 18.2 0.0 6 42 16 52 13 302 0.77 # 4696 # 5784 # 1 # ID=6_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_20 - 350 ABC_tran PF00005.22 137 2.7e-06 21.3 0.0 1 1 1.3e-07 5.3e-06 20.4 0.0 7 45 164 202 161 219 0.82 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_28 - 917 ABC_tran PF00005.22 137 8.6e-05 16.5 0.0 1 1 5.1e-06 0.00021 15.2 0.0 13 37 537 561 528 569 0.86 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 4_3 - 260 ABC_tran PF00005.22 137 0.0002 15.3 0.3 1 1 5.3e-05 0.0022 11.9 0.0 8 30 99 121 93 130 0.86 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 10_4 - 181 TIGR03263 TIGR03263 180 0.0012 11.8 0.0 1 1 1.6e-05 0.0026 10.7 0.0 3 26 2 25 1 31 0.81 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 1216 Eco57I PF07669.6 106 1.9e-09 31.5 0.1 1 1 7.6e-11 1.3e-08 28.8 0.0 2 83 503 591 502 618 0.83 # 11853 # 15500 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 4_3 - 260 RuvB_N PF05496.7 234 0.00041 13.0 0.0 1 1 5.4e-06 0.00089 11.9 0.0 50 119 102 182 89 190 0.68 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 10_4 - 181 AAA_19 PF13245.1 76 0.00039 13.8 0.0 1 1 1.6e-05 0.0014 12.1 0.0 15 33 5 22 2 38 0.84 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_3 - 260 AAA_19 PF13245.1 76 0.00067 13.0 0.0 1 1 2e-05 0.0016 11.8 0.0 10 37 103 129 96 154 0.79 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_28 - 917 AAA_10 PF12846.2 304 5.4e-42 137.8 0.1 1 1 6.2e-43 2.1e-41 135.9 0.0 2 298 536 830 535 836 0.91 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 1_13 - 636 AAA_10 PF12846.2 304 3.6e-10 33.3 0.0 1 1 3.3e-09 1.1e-07 25.2 0.0 4 299 192 481 189 483 0.71 # 11303 # 13210 # -1 # ID=1_13;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 4_3 - 260 AAA_10 PF12846.2 304 9.7e-06 18.8 0.6 1 2 6.3e-06 0.00021 14.4 0.0 1 33 102 134 102 141 0.92 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 4_3 - 260 AAA_10 PF12846.2 304 9.7e-06 18.8 0.6 2 2 0.088 2.9 0.8 0.0 213 247 153 192 135 202 0.67 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 13_3 - 207 AAA_10 PF12846.2 304 2.2e-05 17.6 0.0 1 1 1.2e-06 3.9e-05 16.8 0.0 11 47 12 50 10 69 0.82 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 1_20 - 350 AAA_10 PF12846.2 304 9e-05 15.6 0.0 1 1 4.3e-06 0.00014 14.9 0.0 4 23 171 190 168 212 0.89 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 4_3 - 260 ResIII PF04851.10 184 0.00066 13.1 0.0 1 2 4.2e-05 0.0069 9.8 0.0 7 51 88 128 72 140 0.77 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 4_3 - 260 ResIII PF04851.10 184 0.00066 13.1 0.0 2 2 0.017 2.8 1.3 0.0 113 163 132 181 128 204 0.67 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 2_14 - 1216 Methyltransf_31 PF13847.1 152 0.00016 14.9 0.0 1 1 2.9e-06 0.00048 13.3 0.0 3 38 304 356 302 362 0.67 # 11853 # 15500 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_20 - 350 DEAD PF00270.24 169 0.002 11.2 0.0 1 1 2.1e-05 0.0034 10.5 0.0 14 33 168 187 156 241 0.83 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_13 - 636 TrwB_AAD_bind PF10412.4 386 7.7e-10 31.5 0.0 1 2 5.3e-06 0.00029 13.1 0.0 11 53 185 227 180 240 0.88 # 11303 # 13210 # -1 # ID=1_13;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_13 - 636 TrwB_AAD_bind PF10412.4 386 7.7e-10 31.5 0.0 2 2 5.8e-07 3.2e-05 16.3 0.0 263 373 418 533 322 541 0.81 # 11303 # 13210 # -1 # ID=1_13;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_20 - 350 TrwB_AAD_bind PF10412.4 386 0.0011 11.2 0.0 1 1 2.6e-05 0.0014 10.8 0.0 17 43 170 196 153 224 0.79 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_28 - 917 TrwB_AAD_bind PF10412.4 386 0.0011 11.2 0.0 1 1 8.3e-05 0.0045 9.2 0.0 15 37 535 557 525 585 0.75 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 1_13 - 636 T4SS-DNA_transf PF02534.9 469 1.3e-07 24.2 0.0 1 2 1.5e-05 0.0025 10.0 0.0 44 84 181 231 129 272 0.76 # 11303 # 13210 # -1 # ID=1_13;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_13 - 636 T4SS-DNA_transf PF02534.9 469 1.3e-07 24.2 0.0 2 2 4e-06 0.00066 11.9 0.0 252 400 350 498 336 512 0.75 # 11303 # 13210 # -1 # ID=1_13;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 13_3 - 207 ArgK PF03308.11 267 0.00018 13.9 0.0 1 1 2.5e-06 0.00042 12.7 0.0 39 72 12 45 5 53 0.90 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 1_20 - 350 Pox_A32 PF04665.7 241 9.5e-06 18.6 0.1 1 1 8.5e-08 1.4e-05 18.1 0.1 16 61 171 221 161 236 0.81 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_20 - 350 RNA_helicase PF00910.17 107 0.00048 13.9 0.0 1 1 9.9e-06 0.00082 13.2 0.0 2 36 172 211 171 233 0.78 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 10_4 - 181 RNA_helicase PF00910.17 107 0.00095 13.0 0.0 1 1 1.8e-05 0.0015 12.3 0.0 1 26 3 28 3 47 0.84 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 7_2 - 736 UPF0079 PF02367.12 123 8e-07 22.4 0.0 1 1 2.3e-08 1.9e-06 21.1 0.0 7 44 335 372 330 384 0.83 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 10_4 - 181 UPF0079 PF02367.12 123 0.00034 13.9 0.0 1 1 6.6e-06 0.00055 13.2 0.0 17 36 2 21 1 30 0.88 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 10_4 - 181 AAA_24 PF13479.1 213 0.00012 15.3 0.0 1 1 4.2e-06 0.00023 14.4 0.0 6 33 3 34 1 73 0.90 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 13_3 - 207 AAA_24 PF13479.1 213 0.001 12.3 0.6 1 1 5e-05 0.0028 10.9 0.1 12 88 11 95 3 99 0.81 # 688 # 1308 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461 4_3 - 260 AAA_24 PF13479.1 213 0.0016 11.6 0.0 1 1 0.00011 0.0058 9.8 0.0 3 21 102 120 100 127 0.84 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 7_2 - 736 NACHT PF05729.7 166 2.4e-05 17.6 1.7 1 2 0.055 3 1.1 0.1 55 137 100 182 73 211 0.70 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 7_2 - 736 NACHT PF05729.7 166 2.4e-05 17.6 1.7 2 2 3.9e-06 0.00022 14.5 0.1 2 24 345 367 344 370 0.91 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 10_4 - 181 NACHT PF05729.7 166 2.5e-05 17.6 0.0 1 1 2.3e-06 0.00013 15.3 0.0 2 22 2 22 1 37 0.89 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_20 - 350 NACHT PF05729.7 166 0.00013 15.3 0.0 1 1 5.7e-06 0.00031 14.0 0.0 2 22 170 190 169 195 0.89 # 17949 # 18998 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 7_2 - 736 AAA_25 PF13481.1 194 2.5e-05 17.3 0.0 1 1 1.2e-06 9.8e-05 15.4 0.0 21 58 328 368 311 396 0.81 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 4_3 - 260 AAA_25 PF13481.1 194 6.6e-05 16.0 0.0 1 1 1.3e-06 0.0001 15.3 0.0 28 58 97 127 71 173 0.81 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 10_4 - 181 AAA_28 PF13521.1 163 0.00023 14.8 0.0 1 1 5.8e-06 0.00048 13.7 0.0 2 30 3 34 2 165 0.89 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_3 - 260 AAA_28 PF13521.1 163 0.0028 11.2 1.4 1 1 0.0001 0.0083 9.7 0.1 1 27 104 134 104 169 0.71 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 7_2 - 736 AAA_5 PF07728.9 139 4.2e-10 33.1 0.0 1 1 6.9e-11 3.8e-09 30.0 0.0 2 95 346 446 345 561 0.74 # 396 # 2603 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427 4_3 - 260 AAA_5 PF07728.9 139 6.1e-05 16.4 0.2 1 1 1.2e-05 0.00064 13.1 0.1 1 74 104 173 104 181 0.73 # 1897 # 2676 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_28 - 917 AAA_5 PF07728.9 139 0.00062 13.1 0.0 1 1 2.6e-05 0.0014 11.9 0.0 2 25 538 561 537 579 0.84 # 24033 # 26783 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.576 10_4 - 181 APS_kinase PF01583.15 157 2.3e-05 17.7 0.0 1 2 7.3e-06 0.0012 12.1 0.0 4 24 2 22 1 35 0.87 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 10_4 - 181 APS_kinase PF01583.15 157 2.3e-05 17.7 0.0 2 2 0.0032 0.53 3.5 0.1 34 73 107 148 95 160 0.86 # 2203 # 2745 # -1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/cdcd1d81-7608-44c9-801b-6bae606c8eeb # Target file: checkm_output/bins/pm601/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm601/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/cdcd1d81-7608-44c9-801b-6bae606c8eeb checkm_output/bins/pm601/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:07:47 2020 # [ok]