# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 7_7 - 358 Mg_chelatase PF01078.16 207 0.00014 14.5 0.0 1 1 1.8e-06 0.00025 13.6 0.0 14 84 19 89 6 102 0.79 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 9_10 - 228 UPF0020 PF01170.13 180 1.8e-05 17.7 0.0 1 2 0.00029 0.041 6.8 0.0 103 119 17 33 4 88 0.73 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 9_10 - 228 UPF0020 PF01170.13 180 1.8e-05 17.7 0.0 2 2 6.2e-05 0.0087 9.0 0.0 28 54 163 189 158 221 0.67 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_20 - 106 cobW PF02492.14 178 0.00022 14.1 0.0 1 1 3.5e-06 0.00024 13.9 0.0 4 31 5 32 3 63 0.74 # 16823 # 17140 # 1 # ID=1_20;partial=01;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 5_4 - 232 cobW PF02492.14 178 0.00071 12.4 0.0 1 1 1.7e-05 0.0012 11.7 0.0 3 21 39 57 37 80 0.85 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 7_7 - 358 ABC_ATPase PF09818.4 448 0.00085 11.3 1.2 1 2 0.0019 0.26 3.1 0.0 240 264 22 47 14 50 0.87 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 7_7 - 358 ABC_ATPase PF09818.4 448 0.00085 11.3 1.2 2 2 0.00015 0.021 6.7 0.3 378 418 172 212 131 222 0.90 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 7_7 - 358 Rad17 PF03215.10 519 3.1e-06 19.4 0.0 1 1 3.1e-08 4.4e-06 19.0 0.0 32 96 14 79 8 102 0.79 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_6 - 260 IstB_IS21 PF01695.12 178 6.4e-73 237.3 0.1 1 2 0.049 6.9 -0.6 0.0 64 97 25 57 24 61 0.64 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_6 - 260 IstB_IS21 PF01695.12 178 6.4e-73 237.3 0.1 2 2 9.8e-75 1.4e-72 236.2 0.1 1 178 56 235 56 235 0.98 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_2 - 389 MipZ PF09140.6 261 6.1e-06 18.8 0.4 1 2 3.5e-06 0.0005 12.6 0.0 2 47 108 153 107 157 0.87 # 1111 # 2277 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_2 - 389 MipZ PF09140.6 261 6.1e-06 18.8 0.4 2 2 0.0011 0.16 4.4 0.0 88 134 224 270 197 292 0.84 # 1111 # 2277 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 4_12 - 1198 UvrD_C_2 PF13538.1 104 7.4e-08 25.9 0.7 1 2 0.0083 1.2 2.8 0.0 6 44 668 706 664 736 0.74 # 8037 # 11630 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.605 4_12 - 1198 UvrD_C_2 PF13538.1 104 7.4e-08 25.9 0.7 2 2 2.6e-08 3.7e-06 20.5 0.2 3 102 782 885 780 887 0.77 # 8037 # 11630 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.605 5_4 - 232 DUF87 PF01935.12 229 0.00032 13.9 0.0 1 2 1.7e-05 0.0024 11.1 0.1 26 44 39 57 21 59 0.91 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 5_4 - 232 DUF87 PF01935.12 229 0.00032 13.9 0.0 2 2 0.027 3.8 0.6 0.0 136 184 128 196 95 215 0.65 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 5_4 - 232 NB-ARC PF00931.17 287 0.00086 11.6 0.1 1 1 1.9e-05 0.0014 10.9 0.1 18 37 35 54 24 65 0.87 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 7_7 - 358 NB-ARC PF00931.17 287 0.001 11.3 0.0 1 1 3.9e-05 0.0028 9.9 0.0 12 37 20 45 15 49 0.82 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 7_7 - 358 Septin PF00735.13 281 0.00019 13.9 0.0 1 1 2.5e-06 0.00035 13.0 0.0 7 92 30 117 26 131 0.83 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_6 - 260 AAA_22 PF13401.1 131 2.1e-06 21.3 0.2 1 2 8.9e-05 0.0031 11.0 0.0 5 21 103 119 99 131 0.83 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_6 - 260 AAA_22 PF13401.1 131 2.1e-06 21.3 0.2 2 2 0.0015 0.051 7.1 0.0 88 103 154 181 126 203 0.66 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 7_7 - 358 AAA_22 PF13401.1 131 2.8e-06 20.9 0.0 1 1 1.4e-07 5e-06 20.1 0.0 3 57 26 81 24 189 0.84 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 AAA_22 PF13401.1 131 3.3e-05 17.4 0.7 1 1 6.8e-06 0.00024 14.7 0.7 3 25 35 57 31 207 0.82 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_20 - 106 AAA_22 PF13401.1 131 0.00067 13.2 0.0 1 1 2.1e-05 0.00073 13.1 0.0 8 64 5 51 4 82 0.76 # 16823 # 17140 # 1 # ID=1_20;partial=01;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_19 - 522 AAA_15 PF13175.1 415 4.7e-17 55.4 0.1 1 2 6.8e-09 2.4e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_19 - 522 AAA_15 PF13175.1 415 4.7e-17 55.4 0.1 2 2 6.6e-11 2.3e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_2 - 276 AAA_15 PF13175.1 415 2.8e-07 23.2 0.0 1 2 5.9e-05 0.0021 10.5 0.0 23 42 34 53 19 86 0.82 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_2 - 276 AAA_15 PF13175.1 415 2.8e-07 23.2 0.0 2 2 4.9e-05 0.0017 10.8 0.0 370 410 160 200 151 202 0.91 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 7_7 - 358 AAA_15 PF13175.1 415 1.2e-06 21.1 0.0 1 2 0.0017 0.06 5.7 0.0 19 42 23 47 5 103 0.80 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 7_7 - 358 AAA_15 PF13175.1 415 1.2e-06 21.1 0.0 2 2 6.7e-06 0.00024 13.6 0.0 372 411 152 191 143 193 0.93 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 AAA_15 PF13175.1 415 0.00034 13.1 0.0 1 2 0.00016 0.0057 9.1 0.0 25 46 34 60 9 93 0.72 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 5_4 - 232 AAA_15 PF13175.1 415 0.00034 13.1 0.0 2 2 0.022 0.79 2.0 0.0 372 414 164 205 140 205 0.89 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 9_10 - 228 N6_N4_Mtase PF01555.13 231 8.9e-37 120.1 0.0 1 2 1.2e-15 1.6e-13 44.0 0.0 1 114 21 124 21 137 0.89 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 9_10 - 228 N6_N4_Mtase PF01555.13 231 8.9e-37 120.1 0.0 2 2 5.4e-25 7.6e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 7_7 - 358 AAA_17 PF13207.1 121 9.6e-07 23.1 0.0 1 1 4.9e-08 2.3e-06 21.9 0.0 2 60 30 118 29 182 0.54 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 AAA_17 PF13207.1 121 3.9e-05 17.9 0.2 1 1 1.3e-06 6.2e-05 17.2 0.2 2 19 39 56 38 219 0.85 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_2 - 730 AAA_17 PF13207.1 121 0.00045 14.4 0.0 1 1 2.9e-05 0.0014 12.9 0.0 3 27 189 217 187 284 0.70 # 1689 # 3878 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_2 - 276 AAA_21 PF13304.1 303 1e-17 58.4 0.0 1 2 5.1e-09 1.8e-07 24.7 0.0 1 25 35 63 35 100 0.77 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_2 - 276 AAA_21 PF13304.1 303 1e-17 58.4 0.0 2 2 3.4e-11 1.2e-09 31.9 0.0 232 298 138 201 107 203 0.84 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_19 - 522 AAA_21 PF13304.1 303 8.8e-14 45.5 0.1 1 2 2.8e-06 0.0001 15.7 0.0 2 24 27 49 27 76 0.83 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_19 - 522 AAA_21 PF13304.1 303 8.8e-14 45.5 0.1 2 2 8.2e-10 2.9e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 5_4 - 232 AAA_21 PF13304.1 303 3.3e-13 43.6 0.0 1 2 7.5e-06 0.00026 14.3 0.1 1 22 38 59 38 71 0.87 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 5_4 - 232 AAA_21 PF13304.1 303 3.3e-13 43.6 0.0 2 2 1.2e-09 4.4e-08 26.8 0.0 234 301 141 205 134 206 0.96 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 7_7 - 358 AAA_21 PF13304.1 303 1.2e-10 35.1 0.0 1 2 1.4e-07 5e-06 20.0 0.0 1 59 29 96 29 112 0.69 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 7_7 - 358 AAA_21 PF13304.1 303 1.2e-10 35.1 0.0 2 2 1.8e-05 0.00063 13.1 0.0 234 298 129 191 118 197 0.88 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 7_11 - 76 ADH_zinc_N_2 PF13602.1 127 2.7e-05 18.5 0.0 1 1 1.9e-07 2.7e-05 18.5 0.0 80 122 26 66 6 71 0.85 # 7130 # 7357 # -1 # ID=7_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 7_7 - 358 Miro PF08477.8 119 0.00017 15.5 0.0 1 1 2.9e-06 0.00041 14.3 0.0 2 30 30 61 30 93 0.76 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 MobB PF03205.9 140 0.00037 13.6 0.0 1 1 9.6e-06 0.00068 12.8 0.0 3 20 39 56 37 108 0.84 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_2 - 730 MobB PF03205.9 140 0.0015 11.6 0.0 1 1 5.2e-05 0.0037 10.4 0.0 7 34 192 219 188 225 0.89 # 1689 # 3878 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_2 - 389 ArsA_ATPase PF02374.10 305 2.5e-06 20.1 0.4 1 2 1.7e-06 0.00023 13.6 0.1 9 36 115 142 109 151 0.89 # 1111 # 2277 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_2 - 389 ArsA_ATPase PF02374.10 305 2.5e-06 20.1 0.4 2 2 0.0011 0.16 4.3 0.0 123 136 231 244 221 251 0.84 # 1111 # 2277 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 4_6 - 260 PhoH PF02562.11 205 1.2e-07 24.5 0.2 1 2 0.064 9 -1.2 0.0 62 108 19 64 2 76 0.61 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_6 - 260 PhoH PF02562.11 205 1.2e-07 24.5 0.2 2 2 3.6e-09 5e-07 22.5 0.0 11 48 94 131 83 159 0.83 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_6 - 260 AFG1_ATPase PF03969.11 362 0.0001 14.6 0.2 1 1 2.8e-06 0.00039 12.6 0.2 63 216 103 254 43 259 0.72 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_2 - 730 Zeta_toxin PF06414.7 201 0.0012 11.4 0.0 1 1 3.5e-05 0.0049 9.3 0.0 21 49 190 219 182 236 0.85 # 1689 # 3878 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_19 - 522 SMC_N PF02463.14 220 3.5e-11 36.1 0.0 1 2 5.6e-11 2e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_19 - 522 SMC_N PF02463.14 220 3.5e-11 36.1 0.0 2 2 0.0095 0.33 3.5 0.0 163 204 281 321 253 330 0.85 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 5_4 - 232 SMC_N PF02463.14 220 4e-09 29.4 0.0 1 1 9.3e-09 3.3e-07 23.1 0.0 24 212 36 216 24 220 0.76 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_2 - 276 SMC_N PF02463.14 220 3.1e-08 26.4 0.2 1 1 2.3e-09 7.9e-08 25.1 0.2 25 198 34 201 22 218 0.75 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 7_7 - 358 SMC_N PF02463.14 220 6.4e-08 25.4 0.2 1 1 3.5e-08 1.2e-06 21.2 0.2 24 209 27 203 16 211 0.66 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_2 - 389 VirC1 PF07015.6 231 9.3e-05 14.9 0.1 1 2 0.00028 0.04 6.3 0.0 4 42 109 147 107 154 0.91 # 1111 # 2277 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_2 - 389 VirC1 PF07015.6 231 9.3e-05 14.9 0.1 2 2 0.0003 0.042 6.2 0.1 84 139 235 290 222 312 0.77 # 1111 # 2277 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 7_7 - 358 Arch_ATPase PF01637.13 234 0.00033 13.8 0.0 1 1 7e-06 0.00049 13.2 0.0 8 39 17 46 11 62 0.80 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_6 - 260 Arch_ATPase PF01637.13 234 0.0013 11.8 0.1 1 1 6.9e-05 0.0049 9.9 0.0 8 37 90 119 87 140 0.79 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 7_7 - 358 AAA_16 PF13191.1 185 2.6e-07 24.2 0.1 1 1 2.7e-08 6.4e-07 22.9 0.1 14 48 18 50 15 84 0.78 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_2 - 730 AAA_16 PF13191.1 185 5.3e-06 19.9 0.0 1 1 1.2e-06 2.8e-05 17.5 0.0 21 60 182 222 179 263 0.81 # 1689 # 3878 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 5_4 - 232 AAA_16 PF13191.1 185 8.6e-06 19.2 0.4 1 1 8.4e-07 2e-05 18.0 0.4 18 56 30 69 23 200 0.73 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_6 - 260 AAA_16 PF13191.1 185 8.5e-05 16.0 1.0 1 1 1.8e-05 0.00042 13.7 0.1 16 41 97 119 84 146 0.78 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_16 - 564 AAA_16 PF13191.1 185 0.00011 15.6 0.0 1 1 1e-05 0.00024 14.5 0.0 14 64 46 96 38 113 0.77 # 12513 # 14204 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 2_2 - 276 AAA_16 PF13191.1 185 0.00031 14.1 0.2 1 1 3.2e-05 0.00075 12.9 0.0 12 63 23 74 16 92 0.72 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_19 - 522 AAA_23 PF13476.1 202 4.7e-12 40.0 0.0 1 1 6.4e-13 2.3e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_2 - 276 AAA_23 PF13476.1 202 1.5e-05 18.7 0.2 1 1 7.6e-07 2.7e-05 17.9 0.2 21 40 35 54 22 64 0.86 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 5_4 - 232 AAA_23 PF13476.1 202 0.0007 13.3 0.0 1 1 2.8e-05 0.00099 12.8 0.0 19 39 36 56 18 94 0.84 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 7_7 - 358 AAA_23 PF13476.1 202 0.00086 13.0 0.0 1 1 3.7e-05 0.0013 12.4 0.0 14 37 21 45 2 49 0.78 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 7_7 - 358 AAA_18 PF13238.1 129 3.9e-05 17.4 0.0 1 1 1.8e-06 0.00013 15.7 0.0 1 22 30 51 30 139 0.77 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 AAA_18 PF13238.1 129 6e-05 16.8 0.7 1 1 6.1e-06 0.00043 14.0 0.7 1 19 39 57 39 214 0.88 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_2 - 276 AAA_13 PF13166.1 712 0.0017 10.2 0.1 1 2 0.0015 0.11 4.2 0.2 23 36 40 53 29 66 0.83 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_2 - 276 AAA_13 PF13166.1 712 0.0017 10.2 0.1 2 2 0.0021 0.15 3.8 0.0 529 572 162 203 152 210 0.90 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 5_4 - 232 AAA_13 PF13166.1 712 0.0023 9.7 0.0 1 1 6.8e-05 0.0048 8.7 0.0 20 42 40 62 25 94 0.83 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_2 - 389 CbiA PF01656.18 195 1.4e-36 119.1 0.0 1 1 1.3e-38 1.9e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 1111 # 2277 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 5_4 - 232 KaiC PF06745.8 227 0.00068 12.2 0.1 1 1 9.4e-06 0.0013 11.2 0.1 7 35 25 52 22 66 0.88 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_6 - 260 AAA_14 PF13173.1 128 1.6e-06 21.4 0.0 1 1 6.8e-08 3.2e-06 20.5 0.0 2 96 102 203 101 221 0.67 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 7_7 - 358 AAA_14 PF13173.1 128 0.00015 15.1 0.0 1 1 7.7e-06 0.00036 13.8 0.0 2 24 27 49 26 90 0.77 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 AAA_14 PF13173.1 128 0.00076 12.8 0.0 1 1 3.7e-05 0.0017 11.6 0.0 2 41 36 75 35 131 0.63 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_19 - 522 AAA_29 PF13555.1 62 1.3e-07 24.5 0.0 1 1 9.3e-09 2.6e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_2 - 276 AAA_29 PF13555.1 62 1e-06 21.6 0.2 1 1 8.6e-08 2.4e-06 20.4 0.2 18 44 29 54 14 63 0.83 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 5_4 - 232 AAA_29 PF13555.1 62 3.8e-06 19.8 0.1 1 1 2.5e-07 7.2e-06 18.9 0.1 16 42 30 55 24 71 0.78 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 7_7 - 358 AAA_29 PF13555.1 62 1.7e-05 17.7 0.0 1 1 1.3e-06 3.6e-05 16.7 0.0 17 40 22 44 17 48 0.85 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_6 - 260 AAA_29 PF13555.1 62 0.001 12.0 0.0 1 1 7.2e-05 0.002 11.1 0.0 19 59 98 139 89 141 0.72 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_6 - 260 AAA PF00004.24 132 2.6e-07 24.3 0.0 1 1 6.3e-09 4.5e-07 23.5 0.0 1 74 105 180 105 214 0.77 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 7_7 - 358 AAA PF00004.24 132 0.00057 13.5 0.0 1 1 1.6e-05 0.0012 12.5 0.0 1 20 30 49 30 75 0.93 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_6 - 260 Bac_DnaA PF00308.13 219 1.5e-09 31.2 0.0 1 1 1.6e-11 2.2e-09 30.6 0.0 37 136 105 202 75 207 0.85 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_6 - 260 Sigma54_activat PF00158.21 168 0.00019 14.3 0.1 1 1 8.2e-06 0.0012 11.8 0.1 18 53 98 133 82 198 0.72 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_13 - 426 Pyr_redox_3 PF13738.1 203 3.1e-18 59.9 0.0 1 2 2e-16 2.8e-14 47.0 0.0 78 200 93 218 64 221 0.87 # 11649 # 12926 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 2_13 - 426 Pyr_redox_3 PF13738.1 203 3.1e-18 59.9 0.0 2 2 2.2e-05 0.0031 10.9 0.0 48 172 234 375 225 381 0.65 # 11649 # 12926 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 5_4 - 232 MMR_HSR1 PF01926.18 116 0.00026 14.3 0.2 1 1 9.5e-06 0.00045 13.6 0.2 2 20 39 57 38 201 0.91 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_2 - 276 MMR_HSR1 PF01926.18 116 0.00052 13.4 0.5 1 1 1.9e-05 0.0009 12.6 0.5 2 21 36 55 35 200 0.75 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 7_7 - 358 MMR_HSR1 PF01926.18 116 0.00066 13.1 0.0 1 1 2.6e-05 0.0012 12.2 0.0 2 21 30 49 29 84 0.82 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 7_7 - 358 DUF258 PF03193.11 161 2.7e-07 23.3 0.0 1 1 1.4e-08 5e-07 22.4 0.0 26 77 17 69 3 83 0.79 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 DUF258 PF03193.11 161 2e-06 20.5 0.0 1 1 8.2e-08 2.9e-06 19.9 0.0 19 61 19 62 4 91 0.83 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_6 - 260 DUF258 PF03193.11 161 1.8e-05 17.4 0.0 1 1 7.8e-07 2.8e-05 16.8 0.0 21 78 88 157 70 192 0.71 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_2 - 276 DUF258 PF03193.11 161 0.00034 13.2 0.1 1 1 1.7e-05 0.00061 12.4 0.1 25 67 22 65 2 71 0.79 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_2 - 730 TraG-D_C PF12696.2 128 1.1e-20 67.2 0.0 1 1 1.4e-22 1.9e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 1689 # 3878 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_2 - 389 AAA_31 PF13614.1 157 1.4e-09 31.5 0.0 1 2 1.4e-08 1.9e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 1111 # 2277 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_2 - 389 AAA_31 PF13614.1 157 1.4e-09 31.5 0.0 2 2 0.00018 0.025 7.9 0.1 110 152 227 268 223 272 0.84 # 1111 # 2277 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 5_4 - 232 NTPase_1 PF03266.10 168 0.00014 15.0 0.1 1 2 6.9e-05 0.0049 10.0 0.0 2 44 39 83 38 91 0.80 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 5_4 - 232 NTPase_1 PF03266.10 168 0.00014 15.0 0.1 2 2 0.0085 0.6 3.2 0.0 87 151 153 219 115 230 0.73 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_6 - 260 NTPase_1 PF03266.10 168 0.00033 13.8 0.1 1 2 0.0032 0.23 4.5 0.1 2 30 105 133 104 153 0.83 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_6 - 260 NTPase_1 PF03266.10 168 0.00033 13.8 0.1 2 2 0.00049 0.035 7.2 0.0 88 112 157 181 144 204 0.72 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_2 - 276 AAA_33 PF13671.1 143 1.1e-05 18.7 0.1 1 1 1e-06 4.7e-05 16.7 0.1 3 33 37 82 35 203 0.61 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 7_7 - 358 AAA_33 PF13671.1 143 1.3e-05 18.5 0.4 1 1 9.6e-07 4.5e-05 16.7 0.4 2 22 30 50 29 201 0.70 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 AAA_33 PF13671.1 143 0.00053 13.3 1.4 1 1 9.2e-05 0.0043 10.3 1.4 2 19 39 56 38 214 0.73 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 9_10 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 38.1 0.0 1 2 2.1e-07 2.9e-05 17.5 0.0 57 114 7 71 2 74 0.69 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 9_10 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 38.1 0.0 2 2 9.7e-08 1.4e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 4_12 - 1198 AAA_30 PF13604.1 196 1e-42 139.3 1.9 1 1 1.2e-43 4.1e-42 137.3 1.9 1 186 409 597 409 604 0.94 # 8037 # 11630 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.605 5_4 - 232 AAA_30 PF13604.1 196 0.00015 14.8 0.4 1 1 7.4e-06 0.00026 14.0 0.4 18 58 36 76 29 202 0.87 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_2 - 730 AAA_30 PF13604.1 196 0.00085 12.3 0.0 1 1 5.1e-05 0.0018 11.2 0.0 21 57 188 224 180 230 0.85 # 1689 # 3878 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_2 - 276 AAA_30 PF13604.1 196 0.00087 12.3 0.3 1 1 5.9e-05 0.0021 11.0 0.1 15 53 30 68 21 83 0.74 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 5_4 - 232 FtsK_SpoIIIE PF01580.13 205 0.00019 14.4 0.0 1 1 3.8e-06 0.00054 12.9 0.0 37 60 35 58 14 77 0.81 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_19 - 522 DUF2813 PF11398.3 373 4.6e-05 16.0 1.2 1 2 4.6e-06 0.00065 12.2 0.0 11 49 12 51 3 56 0.79 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_19 - 522 DUF2813 PF11398.3 373 4.6e-05 16.0 1.2 2 2 0.0067 0.94 1.8 0.0 287 333 279 326 250 333 0.82 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_13 - 426 Lycopene_cycl PF05834.7 374 3.9e-05 16.0 0.0 1 1 4.5e-07 6.4e-05 15.3 0.0 1 144 6 157 6 182 0.73 # 11649 # 12926 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 5_4 - 232 ABC_tran PF00005.22 137 3.4e-36 118.0 0.0 1 1 1.7e-37 4.8e-36 117.5 0.0 1 136 26 171 26 172 0.92 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 7_7 - 358 ABC_tran PF00005.22 137 7.2e-36 116.9 0.0 1 1 5.3e-37 1.5e-35 115.9 0.0 1 136 17 159 17 160 0.90 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 2_2 - 276 ABC_tran PF00005.22 137 5.3e-30 97.9 0.0 1 1 2.8e-31 7.8e-30 97.4 0.0 1 136 23 170 23 171 0.89 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_6 - 260 ABC_tran PF00005.22 137 0.00021 15.0 0.3 1 1 6e-05 0.0017 12.1 0.0 8 30 99 121 93 136 0.86 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_19 - 522 ABC_tran PF00005.22 137 0.00022 14.9 0.0 1 1 2.4e-05 0.00067 13.4 0.0 14 113 27 155 17 158 0.73 # 15273 # 16838 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_13 - 426 K_oxygenase PF13434.1 341 4.2e-118 387.5 0.0 1 1 3.6e-120 5.1e-118 387.2 0.0 2 340 4 333 3 334 0.96 # 11649 # 12926 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 7_7 - 358 TIGR03263 TIGR03263 180 8.2e-05 15.4 0.1 1 2 3.1e-06 0.00044 13.0 0.0 2 22 28 48 27 85 0.82 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 7_7 - 358 TIGR03263 TIGR03263 180 8.2e-05 15.4 0.1 2 2 0.036 5.1 -0.2 0.1 115 152 151 188 135 204 0.81 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 ATP-synt_ab PF00006.20 215 0.00038 13.4 0.1 1 1 8.3e-06 0.0012 11.8 0.1 8 35 29 56 23 74 0.86 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 9_10 - 228 Cons_hypoth95 PF03602.10 183 1.9e-05 17.5 0.0 1 2 0.00041 0.058 6.1 0.0 112 146 18 54 8 81 0.66 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 9_10 - 228 Cons_hypoth95 PF03602.10 183 1.9e-05 17.5 0.0 2 2 4e-05 0.0057 9.4 0.0 41 62 162 183 145 218 0.78 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 4_6 - 260 RuvB_N PF05496.7 234 0.00047 12.6 0.0 1 1 6.5e-06 0.00091 11.7 0.0 50 119 102 182 92 190 0.65 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_12 - 1198 AAA_19 PF13245.1 76 1.3e-07 24.7 0.5 1 1 1.4e-08 5e-07 22.8 0.5 7 76 422 488 415 488 0.74 # 8037 # 11630 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.605 5_4 - 232 AAA_19 PF13245.1 76 0.00026 14.1 0.1 1 1 7.2e-05 0.0025 11.0 0.0 10 54 36 75 29 87 0.75 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_6 - 260 AAA_19 PF13245.1 76 0.00058 13.0 0.0 1 1 4.2e-05 0.0015 11.7 0.0 10 37 103 129 96 154 0.81 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_20 - 106 AAA_19 PF13245.1 76 0.0007 12.8 0.0 1 1 2.8e-05 0.00099 12.3 0.0 15 51 6 34 2 61 0.77 # 16823 # 17140 # 1 # ID=1_20;partial=01;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 3_2 - 730 AAA_10 PF12846.2 304 1.9e-10 34.0 0.0 1 1 1.2e-10 3.4e-09 29.9 0.0 3 296 187 494 186 500 0.69 # 1689 # 3878 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 4_6 - 260 AAA_10 PF12846.2 304 1.1e-05 18.4 0.6 1 1 4.8e-06 0.00013 14.8 0.1 1 33 102 134 102 171 0.89 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 5_4 - 232 AAA_10 PF12846.2 304 1.8e-05 17.6 0.0 1 1 1.7e-06 4.7e-05 16.3 0.0 4 29 39 65 37 85 0.76 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_2 - 276 AAA_10 PF12846.2 304 0.00026 13.9 1.4 1 1 5e-05 0.0014 11.4 1.0 4 34 36 66 33 159 0.89 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 7_7 - 358 AAA_10 PF12846.2 304 0.00073 12.4 0.0 1 1 4.3e-05 0.0012 11.7 0.0 4 22 30 48 28 79 0.86 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 2_2 - 276 SbcCD_C PF13558.1 90 9.5e-07 22.1 0.0 1 1 9.5e-08 6.7e-06 19.4 0.0 26 89 136 186 119 187 0.79 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 5_4 - 232 SbcCD_C PF13558.1 90 1.2e-05 18.6 0.2 1 1 2.6e-06 0.00018 14.8 0.2 32 89 143 187 126 188 0.76 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_6 - 260 ResIII PF04851.10 184 0.00052 13.2 0.0 1 2 6.9e-05 0.0098 9.1 0.0 8 50 89 127 50 135 0.78 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_6 - 260 ResIII PF04851.10 184 0.00052 13.2 0.0 2 2 0.0077 1.1 2.4 0.0 112 163 131 181 125 203 0.72 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_20 - 106 Viral_helicase1 PF01443.13 234 2.9e-06 20.3 0.0 1 1 4.6e-08 3.2e-06 20.2 0.0 2 30 5 38 4 64 0.76 # 16823 # 17140 # 1 # ID=1_20;partial=01;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 4_12 - 1198 Viral_helicase1 PF01443.13 234 0.00024 14.0 0.0 1 2 0.00031 0.022 7.6 0.0 1 23 429 453 429 634 0.70 # 8037 # 11630 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.605 4_12 - 1198 Viral_helicase1 PF01443.13 234 0.00024 14.0 0.0 2 2 0.0042 0.3 3.9 0.0 169 234 826 888 783 888 0.61 # 8037 # 11630 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.605 2_13 - 426 FMO-like PF00743.14 532 3.9e-06 18.6 0.0 1 2 3.9e-06 0.00055 11.5 0.0 142 200 143 198 95 219 0.87 # 11649 # 12926 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 2_13 - 426 FMO-like PF00743.14 532 3.9e-06 18.6 0.0 2 2 0.00035 0.049 5.1 0.0 317 342 319 344 311 377 0.81 # 11649 # 12926 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 7_7 - 358 Adeno_IVa2 PF02456.10 370 0.0014 10.6 0.0 1 1 2.2e-05 0.0031 9.5 0.0 90 116 30 53 5 72 0.75 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 2_13 - 426 NAD_binding_9 PF13454.1 156 4.9e-09 29.5 0.0 1 3 5.8e-08 8.1e-06 19.1 0.0 3 155 10 151 7 152 0.68 # 11649 # 12926 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 2_13 - 426 NAD_binding_9 PF13454.1 156 4.9e-09 29.5 0.0 2 3 0.02 2.8 1.1 0.0 2 31 186 214 185 229 0.79 # 11649 # 12926 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 2_13 - 426 NAD_binding_9 PF13454.1 156 4.9e-09 29.5 0.0 3 3 0.00086 0.12 5.5 0.0 116 155 287 332 254 333 0.73 # 11649 # 12926 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 7_7 - 358 PduV-EutP PF10662.4 143 0.0013 11.7 0.1 1 1 2.1e-05 0.003 10.5 0.0 4 25 30 51 28 68 0.90 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_2 - 730 TrwB_AAD_bind PF10412.4 386 3.1e-150 493.4 0.0 1 1 2.7e-152 3.8e-150 493.1 0.0 2 386 172 561 171 561 0.99 # 1689 # 3878 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 4_12 - 1198 AAA_11 PF13086.1 236 0.00018 14.5 0.0 1 1 1.3e-06 0.00018 14.5 0.0 2 75 410 480 409 501 0.81 # 8037 # 11630 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.605 3_2 - 730 T4SS-DNA_transf PF02534.9 469 1e-09 30.8 0.0 1 1 2e-11 2.8e-09 29.4 0.0 264 361 382 476 198 500 0.83 # 1689 # 3878 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 9_10 - 228 MethyltransfD12 PF02086.10 260 0.00054 12.8 0.0 1 2 0.014 1.9 1.2 0.0 173 188 16 31 10 92 0.81 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 9_10 - 228 MethyltransfD12 PF02086.10 260 0.00054 12.8 0.0 2 2 4e-05 0.0056 9.5 0.0 20 46 163 189 148 197 0.78 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_14 - 733 Plug PF07715.10 108 5.7e-20 65.1 2.2 1 1 4.8e-22 6.8e-20 64.9 0.6 3 107 44 145 42 146 0.94 # 13011 # 15209 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.547 7_7 - 358 RNA_helicase PF00910.17 107 0.00067 13.3 0.0 1 1 1.1e-05 0.0016 12.1 0.0 1 19 30 48 30 73 0.91 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_20 - 106 UvrD-helicase PF00580.16 315 5e-05 16.1 0.1 1 1 6e-07 8.5e-05 15.3 0.2 16 69 4 49 2 81 0.83 # 16823 # 17140 # 1 # ID=1_20;partial=01;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 5_4 - 232 NACHT PF05729.7 166 0.00027 14.0 0.1 1 1 1.7e-05 0.0012 11.9 0.0 3 20 39 56 37 76 0.86 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 7_7 - 358 NACHT PF05729.7 166 0.00029 13.9 0.1 1 1 8.6e-06 0.00061 12.9 0.1 3 21 30 48 28 50 0.89 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_4 - 232 AAA_25 PF13481.1 194 8.5e-06 18.6 0.0 1 2 2.1e-06 7.2e-05 15.6 0.0 29 58 32 62 14 131 0.78 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 5_4 - 232 AAA_25 PF13481.1 194 8.5e-06 18.6 0.0 2 2 0.068 2.4 0.9 0.0 161 188 175 201 165 206 0.69 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 7_7 - 358 AAA_25 PF13481.1 194 2.9e-05 16.9 0.3 1 1 3.3e-06 0.00012 14.9 0.0 30 54 24 48 11 75 0.83 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_6 - 260 AAA_25 PF13481.1 194 3.6e-05 16.6 0.0 1 1 1.7e-06 5.8e-05 15.9 0.0 22 58 90 127 71 183 0.79 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_2 - 276 AAA_25 PF13481.1 194 0.00092 12.0 0.1 1 1 8.7e-05 0.0031 10.3 0.1 30 57 30 57 23 87 0.85 # 1371 # 2198 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 9_10 - 228 Methyltransf_15 PF09445.5 164 0.0011 11.9 0.0 1 2 0.045 6.4 -0.3 0.0 53 79 4 29 2 32 0.90 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 9_10 - 228 Methyltransf_15 PF09445.5 164 0.0011 11.9 0.0 2 2 4.2e-05 0.006 9.5 0.0 3 31 166 194 164 209 0.86 # 6225 # 6908 # -1 # ID=9_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 5_4 - 232 AAA_28 PF13521.1 163 1.1e-06 22.1 0.1 1 2 1.7e-06 8.2e-05 16.0 0.0 2 21 39 58 38 94 0.79 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 5_4 - 232 AAA_28 PF13521.1 163 1.1e-06 22.1 0.1 2 2 0.0086 0.4 4.0 0.0 19 79 111 168 104 174 0.63 # 1640 # 2335 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 7_7 - 358 AAA_28 PF13521.1 163 3.8e-05 17.1 0.0 1 1 1.5e-06 7e-05 16.2 0.0 2 22 30 50 29 112 0.79 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_6 - 260 AAA_28 PF13521.1 163 0.0015 11.9 1.6 1 1 8.9e-05 0.0042 10.4 0.2 1 43 104 151 104 172 0.70 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 7_7 - 358 TOBE_2 PF08402.5 75 4.5e-12 39.3 0.1 1 1 7.2e-14 1e-11 38.1 0.1 1 75 270 342 270 342 0.94 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_6 - 260 AAA_5 PF07728.9 139 4.2e-05 16.7 0.3 1 1 7.2e-06 0.00051 13.2 0.2 1 74 104 173 104 180 0.72 # 4052 # 4831 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 7_7 - 358 AAA_5 PF07728.9 139 5.6e-05 16.3 0.2 1 1 2e-06 0.00014 15.0 0.0 2 22 30 50 29 69 0.87 # 3330 # 4403 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/e0c32576-423f-4238-acd7-3112ec089e0b # Target file: checkm_output/bins/pm570/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm570/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/e0c32576-423f-4238-acd7-3112ec089e0b checkm_output/bins/pm570/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:07:27 2020 # [ok]