# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 238 AAA_23 PF13476.1 202 0.021 4.2 13.0 1 2 0.0009 0.0063 6.0 0.5 144 193 44 93 31 102 0.72 # 437 # 1150 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_2 - 238 AAA_23 PF13476.1 202 0.021 4.2 13.0 2 2 0.0099 0.069 2.6 6.2 136 192 145 200 101 233 0.70 # 437 # 1150 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/21f5e71c-d0cd-4dfb-94dc-76a8dbb01137 # Target file: checkm_output/bins/pm568/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm568/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/21f5e71c-d0cd-4dfb-94dc-76a8dbb01137 checkm_output/bins/pm568/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:07:22 2020 # [ok]