# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_21 - 270 UPF0020 PF01170.13 180 2.7e-05 16.6 0.0 1 2 0.0007 0.067 5.6 0.0 103 117 17 31 4 77 0.85 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_21 - 270 UPF0020 PF01170.13 180 2.7e-05 16.6 0.0 2 2 5.8e-05 0.0055 9.1 0.0 28 54 163 188 158 252 0.72 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 2_15 - 301 Rad17 PF03215.10 519 5.2e-05 14.8 0.0 1 1 7e-07 6.7e-05 14.5 0.0 38 69 53 84 47 128 0.78 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 1_34 - 244 FeoB_N PF02421.13 156 0.00057 12.0 0.1 1 1 1.1e-05 0.001 11.2 0.1 3 33 36 63 34 95 0.86 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 3_7 - 114 IstB_IS21 PF01695.12 178 6.3e-25 80.4 0.3 1 2 0.019 1.8 0.7 0.2 83 111 4 32 2 33 0.87 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 3_7 - 114 IstB_IS21 PF01695.12 178 6.3e-25 80.4 0.3 2 2 4.6e-26 4.4e-24 77.7 0.0 1 63 51 113 51 113 0.98 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 4_2 - 210 AAA_22 PF13401.1 131 2.1e-06 20.7 0.3 1 1 2.4e-07 7.7e-06 18.9 0.3 3 124 26 192 22 198 0.77 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 2_15 - 301 AAA_22 PF13401.1 131 4.2e-06 19.8 0.0 1 1 2.6e-07 8.2e-06 18.8 0.0 4 37 60 104 57 158 0.71 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 3_3 - 524 AAA_22 PF13401.1 131 0.0016 11.4 1.9 1 2 0.029 0.91 2.5 0.6 36 88 26 79 10 97 0.77 # 1215 # 2786 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.567 3_3 - 524 AAA_22 PF13401.1 131 0.0016 11.4 1.9 2 2 0.0012 0.039 6.9 0.0 12 44 266 298 264 414 0.70 # 1215 # 2786 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.567 4_2 - 210 MutS_V PF00488.16 235 0.00018 13.7 0.0 1 1 3.2e-06 0.00031 13.0 0.0 29 66 13 50 2 58 0.80 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 4_2 - 210 AAA_15 PF13175.1 415 1.4e-08 26.9 8.8 1 2 1.4e-06 6.5e-05 14.9 7.7 8 81 13 88 6 135 0.67 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 4_2 - 210 AAA_15 PF13175.1 415 1.4e-08 26.9 8.8 2 2 1.8e-05 0.00087 11.2 0.0 368 414 154 196 142 197 0.85 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 1_34 - 244 AAA_15 PF13175.1 415 1.5e-05 17.0 8.6 1 2 0.0001 0.0048 8.7 2.1 12 53 23 65 7 144 0.62 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 1_34 - 244 AAA_15 PF13175.1 415 1.5e-05 17.0 8.6 2 2 6.4e-06 0.0003 12.7 0.2 342 411 133 193 98 194 0.76 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 1_21 - 270 N6_N4_Mtase PF01555.13 231 2.1e-35 115.1 0.0 1 1 4.9e-35 4.7e-33 107.4 0.0 1 227 21 199 21 203 0.92 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 2_15 - 301 AAA_17 PF13207.1 121 2.5e-06 21.2 0.0 1 1 1.4e-07 4.4e-06 20.4 0.0 1 64 62 129 62 174 0.68 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 AAA_17 PF13207.1 121 0.0003 14.5 0.4 1 1 2.4e-05 0.00076 13.2 0.4 3 18 31 46 31 54 0.90 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 3_7 - 114 AAA_17 PF13207.1 121 0.00078 13.1 0.1 1 2 0.061 1.9 2.2 0.0 22 53 10 46 5 94 0.60 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 3_7 - 114 AAA_17 PF13207.1 121 0.00078 13.1 0.1 2 2 0.00037 0.012 9.3 0.0 2 15 100 113 99 113 0.84 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 4_2 - 210 AAA_21 PF13304.1 303 1.1e-18 61.0 6.1 1 1 4.9e-18 2.3e-16 53.3 6.1 1 303 29 198 29 198 0.77 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 1_34 - 244 AAA_21 PF13304.1 303 6.4e-15 48.6 4.0 1 2 4.9e-06 0.00023 14.0 1.9 2 24 36 58 35 126 0.76 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 1_34 - 244 AAA_21 PF13304.1 303 6.4e-15 48.6 4.0 2 2 2.3e-12 1.1e-10 34.7 0.0 189 297 120 192 85 197 0.79 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 301 MobB PF03205.9 140 0.00015 14.3 0.0 1 1 2.7e-06 0.00026 13.6 0.0 2 34 62 94 61 99 0.87 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 2_15 - 301 T2SE PF00437.15 272 5e-70 228.2 0.8 1 1 6.9e-72 6.6e-70 227.9 0.8 74 271 7 198 3 199 0.98 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 2_15 - 301 Zeta_toxin PF06414.7 201 0.00046 12.1 0.0 1 1 7.9e-06 0.00075 11.4 0.0 18 46 62 92 48 100 0.79 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 SMC_N PF02463.14 220 7.3e-10 31.2 3.1 1 2 9.3e-06 0.00044 12.3 0.2 15 44 18 47 7 55 0.82 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 4_2 - 210 SMC_N PF02463.14 220 7.3e-10 31.2 3.1 2 2 4.9e-08 2.4e-06 19.8 0.3 118 206 111 201 57 208 0.68 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 1_34 - 244 SMC_N PF02463.14 220 6.7e-06 18.3 0.4 1 3 0.0011 0.053 5.5 0.1 26 44 35 53 23 75 0.84 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 1_34 - 244 SMC_N PF02463.14 220 6.7e-06 18.3 0.4 2 3 0.00015 0.0069 8.4 0.0 137 188 133 182 86 199 0.87 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 1_34 - 244 SMC_N PF02463.14 220 6.7e-06 18.3 0.4 3 3 0.028 1.3 1.0 0.0 46 82 204 238 198 243 0.75 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 301 Arch_ATPase PF01637.13 234 6.5e-05 15.5 0.0 1 1 1.8e-06 8.6e-05 15.1 0.0 11 56 52 96 50 153 0.70 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 Arch_ATPase PF01637.13 234 0.00019 14.0 0.6 1 1 5.9e-06 0.00028 13.4 0.6 18 63 25 71 19 187 0.66 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 2_15 - 301 AAA_16 PF13191.1 185 2.8e-08 26.8 0.0 1 1 1.3e-09 4e-08 26.3 0.0 24 121 60 166 49 209 0.72 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 AAA_16 PF13191.1 185 1.4e-05 18.0 0.2 1 1 1e-06 3.3e-05 16.8 0.2 21 44 24 46 14 207 0.76 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 3_7 - 114 AAA_16 PF13191.1 185 1.7e-05 17.7 0.1 1 2 0.0053 0.17 4.7 0.0 123 173 21 88 3 95 0.62 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 3_7 - 114 AAA_16 PF13191.1 185 1.7e-05 17.7 0.1 2 2 3.2e-05 0.001 11.9 0.1 23 38 96 111 85 113 0.86 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 1_34 - 244 AAA_23 PF13476.1 202 8.8e-08 25.5 1.9 1 1 4.4e-09 1.4e-07 24.9 1.9 12 114 25 143 18 238 0.62 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 301 AAA_23 PF13476.1 202 4.8e-06 19.8 0.0 1 1 2.3e-07 7.3e-06 19.2 0.0 19 38 60 79 46 90 0.88 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 AAA_23 PF13476.1 202 1.3e-05 18.4 6.4 1 1 7.3e-07 2.3e-05 17.6 6.5 10 100 17 99 11 183 0.52 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 4_2 - 210 AAA_18 PF13238.1 129 4e-06 20.0 0.2 1 1 1.3e-06 6.1e-05 16.2 0.2 2 71 31 114 31 206 0.69 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 2_15 - 301 AAA_18 PF13238.1 129 4.1e-06 20.0 0.0 1 1 1.4e-07 6.4e-06 19.3 0.0 1 69 63 140 63 198 0.63 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 1_6 - 513 AAA_13 PF13166.1 712 0.00029 12.1 0.1 1 2 3.1e-06 0.00029 12.1 0.1 362 438 6 82 1 102 0.91 # 3289 # 4827 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_6 - 513 AAA_13 PF13166.1 712 0.00029 12.1 0.1 2 2 0.096 9.2 -2.7 0.1 428 464 376 411 348 418 0.51 # 3289 # 4827 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 2_15 - 301 AAA_14 PF13173.1 128 2.3e-05 17.2 0.0 1 1 3.9e-07 3.7e-05 16.5 0.0 3 86 61 154 59 177 0.60 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 AAA_29 PF13555.1 62 6.7e-07 21.7 0.0 1 1 5.2e-08 1.7e-06 20.4 0.0 13 40 18 44 12 50 0.85 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 2_15 - 301 AAA_29 PF13555.1 62 1.2e-06 20.8 0.0 1 1 8.8e-08 2.8e-06 19.7 0.0 21 43 59 80 50 89 0.82 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 1_34 - 244 AAA_29 PF13555.1 62 0.00017 14.0 0.0 1 1 1.2e-05 0.00038 12.8 0.0 15 40 26 50 22 53 0.78 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 301 AAA PF00004.24 132 0.00051 13.1 0.0 1 1 2e-05 0.00096 12.2 0.0 1 32 63 94 63 163 0.65 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 114 AAA PF00004.24 132 0.00053 13.1 0.6 1 2 0.097 4.6 0.3 0.0 23 54 31 62 10 69 0.71 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 3_7 - 114 AAA PF00004.24 132 0.00053 13.1 0.6 2 2 5.3e-05 0.0025 10.9 0.3 1 12 100 111 100 113 0.90 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_15 - 301 TK PF00265.13 176 0.00046 12.6 0.0 1 1 7.1e-06 0.00068 12.1 0.0 3 85 62 138 60 153 0.79 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 2_15 - 301 AAA_8 PF12780.2 268 0.00086 11.1 0.0 1 1 1.1e-05 0.0011 10.8 0.0 10 52 39 86 31 143 0.81 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 MMR_HSR1 PF01926.18 116 5.7e-05 15.9 1.0 1 1 3e-06 0.00014 14.7 1.0 3 41 31 71 30 206 0.73 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 1_34 - 244 MMR_HSR1 PF01926.18 116 0.00015 14.5 0.8 1 1 6e-06 0.00029 13.7 0.8 2 38 36 68 35 238 0.87 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 4_2 - 210 DUF258 PF03193.11 161 2.7e-07 22.8 0.0 1 1 1.5e-08 4.8e-07 21.9 0.0 34 59 25 51 4 70 0.80 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 1_34 - 244 DUF258 PF03193.11 161 0.00012 14.1 0.1 1 1 6.1e-06 0.00019 13.5 0.1 23 67 20 65 4 83 0.78 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 301 DUF258 PF03193.11 161 0.00064 11.8 0.0 1 1 3.3e-05 0.0011 11.0 0.0 18 67 44 92 29 97 0.73 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 2_15 - 301 NTPase_1 PF03266.10 168 4.9e-05 15.9 0.2 1 2 6.4e-06 0.00061 12.3 0.0 2 33 63 91 62 97 0.81 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 2_15 - 301 NTPase_1 PF03266.10 168 4.9e-05 15.9 0.2 2 2 0.016 1.5 1.3 0.0 74 117 108 147 98 177 0.59 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 2_15 - 301 AAA_33 PF13671.1 143 0.00019 14.2 0.0 1 1 4.2e-06 0.00039 13.1 0.0 2 77 63 136 62 152 0.75 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 1_21 - 270 Methyltransf_26 PF13659.1 117 7.6e-11 35.0 0.1 1 2 1.5e-06 0.00014 14.7 0.0 57 114 7 71 2 74 0.71 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_21 - 270 Methyltransf_26 PF13659.1 117 7.6e-11 35.0 0.1 2 2 1.2e-07 1.1e-05 18.3 0.0 4 43 167 205 164 253 0.71 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 2_15 - 301 AAA_30 PF13604.1 196 0.00024 13.5 0.0 1 1 5e-06 0.00047 12.6 0.0 10 44 52 86 44 95 0.81 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 2_15 - 301 FtsK_SpoIIIE PF01580.13 205 0.00066 12.0 0.0 1 1 1.2e-05 0.0011 11.2 0.0 36 57 58 79 30 88 0.81 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 ABC_tran PF00005.22 137 3.5e-27 88.2 0.0 1 1 1.7e-28 5.5e-27 87.6 0.0 1 137 17 163 17 163 0.93 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 1_34 - 244 ABC_tran PF00005.22 137 5e-24 78.0 0.0 1 1 2.3e-25 7.2e-24 77.5 0.0 2 136 24 162 23 163 0.93 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 301 ABC_tran PF00005.22 137 0.00019 14.6 0.0 1 1 9.7e-06 0.00031 13.9 0.0 13 51 62 100 56 183 0.65 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 TIGR03263 TIGR03263 180 0.0004 12.6 0.5 1 2 9.3e-06 0.00089 11.4 0.2 3 20 29 46 27 55 0.85 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 4_2 - 210 TIGR03263 TIGR03263 180 0.0004 12.6 0.5 2 2 0.088 8.3 -1.5 0.0 82 112 88 118 48 123 0.63 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 1_21 - 270 Cons_hypoth95 PF03602.10 183 1.8e-05 17.0 0.0 1 2 0.0007 0.066 5.4 0.0 112 128 18 34 9 82 0.67 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_21 - 270 Cons_hypoth95 PF03602.10 183 1.8e-05 17.0 0.0 2 2 3.4e-05 0.0033 9.7 0.0 41 64 162 185 145 234 0.71 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 2_15 - 301 AAA_19 PF13245.1 76 7.1e-07 21.8 0.0 1 1 5.3e-08 2.5e-06 20.1 0.0 6 36 55 86 52 99 0.83 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 114 AAA_19 PF13245.1 76 0.00023 13.7 0.0 1 2 0.086 4.1 0.2 0.0 51 75 47 72 24 73 0.83 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 3_7 - 114 AAA_19 PF13245.1 76 0.00023 13.7 0.0 2 2 2.6e-05 0.0012 11.4 0.0 12 25 99 112 87 113 0.77 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 4_2 - 210 AAA_10 PF12846.2 304 3.6e-06 19.4 2.6 1 2 4.4e-05 0.0021 10.3 0.8 5 22 31 48 28 88 0.91 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 4_2 - 210 AAA_10 PF12846.2 304 3.6e-06 19.4 2.6 2 2 0.0001 0.0049 9.1 0.1 162 278 79 206 57 209 0.78 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 2_15 - 301 AAA_10 PF12846.2 304 0.00036 12.8 0.0 1 1 1.2e-05 0.00055 12.2 0.0 3 36 62 96 60 109 0.77 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 4_2 - 210 SbcCD_C PF13558.1 90 0.00021 14.1 0.0 1 1 1.4e-05 0.0013 11.5 0.0 27 89 129 178 122 179 0.84 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 2_15 - 301 ResIII PF04851.10 184 0.0012 11.6 0.0 1 1 1.7e-05 0.0017 11.1 0.0 21 51 58 86 25 99 0.80 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 1_35 - 188 Methyltransf_31 PF13847.1 152 0.0021 10.5 2.3 1 2 4.8e-05 0.0045 9.4 1.0 39 88 29 78 24 99 0.83 # 27004 # 27567 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.319 1_35 - 188 Methyltransf_31 PF13847.1 152 0.0021 10.5 2.3 2 2 0.04 3.8 -0.1 0.0 52 67 133 148 124 172 0.79 # 27004 # 27567 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.319 1_6 - 513 DUF3584 PF12128.3 1201 0.0038 7.4 5.7 1 2 6.3e-06 0.0006 10.0 2.1 304 377 12 86 5 100 0.88 # 3289 # 4827 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_6 - 513 DUF3584 PF12128.3 1201 0.0038 7.4 5.7 2 2 0.068 6.5 -3.4 0.1 281 977 378 399 346 419 0.42 # 3289 # 4827 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_10 - 283 Methyltransf_27 PF13708.1 194 2.2e-67 219.1 0.0 1 1 3.1e-69 3e-67 218.7 0.0 2 194 85 278 84 278 0.96 # 8746 # 9594 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.510 2_15 - 301 AAA_11 PF13086.1 236 2.9e-05 16.5 0.0 1 1 4.2e-07 4e-05 16.1 0.0 10 111 52 152 44 195 0.76 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 1_21 - 270 MethyltransfD12 PF02086.10 260 0.00073 11.8 0.1 1 2 0.035 3.3 -0.2 0.1 175 188 18 31 9 38 0.80 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_21 - 270 MethyltransfD12 PF02086.10 260 0.00073 11.8 0.1 2 2 5.1e-05 0.0049 9.1 0.0 20 46 163 189 148 197 0.78 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_34 - 244 UPF0079 PF02367.12 123 0.00019 13.9 0.2 1 1 4.5e-06 0.00043 12.8 0.2 9 37 27 55 22 65 0.81 # 26269 # 27000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.354 4_2 - 210 AAA_25 PF13481.1 194 0.00012 14.3 0.0 1 1 9e-06 0.00028 13.1 0.0 30 50 24 44 4 68 0.81 # 1695 # 2324 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 2_15 - 301 AAA_25 PF13481.1 194 0.00041 12.6 0.1 1 1 3.9e-05 0.0012 11.1 0.1 27 53 53 80 36 86 0.79 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 114 AAA_25 PF13481.1 194 0.00087 11.5 0.0 1 1 3.8e-05 0.0012 11.1 0.0 18 49 77 113 59 113 0.73 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 1_21 - 270 Methyltransf_15 PF09445.5 164 0.00029 13.3 0.0 1 2 0.04 3.8 -0.2 0.0 53 80 4 30 2 64 0.88 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_21 - 270 Methyltransf_15 PF09445.5 164 0.00029 13.3 0.0 2 2 1.7e-05 0.0016 10.9 0.0 3 63 166 224 164 240 0.72 # 17092 # 17901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 2_15 - 301 AAA_5 PF07728.9 139 6.1e-05 15.6 0.0 1 1 2.1e-06 0.0001 14.9 0.0 2 95 63 159 62 190 0.72 # 11713 # 12615 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 114 AAA_5 PF07728.9 139 0.00017 14.1 0.6 1 2 0.053 2.5 0.6 0.0 91 126 13 49 3 62 0.53 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 3_7 - 114 AAA_5 PF07728.9 139 0.00017 14.1 0.6 2 2 1.9e-05 0.00088 11.9 0.1 1 14 99 112 99 113 0.91 # 5839 # 6180 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/e777671d-0e8f-42c0-9173-09e46ad7de7e # Target file: checkm_output/bins/pm531/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm531/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/e777671d-0e8f-42c0-9173-09e46ad7de7e checkm_output/bins/pm531/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:07:02 2020 # [ok]