# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_27 - 529 Mg_chelatase PF01078.16 207 5e-07 23.0 0.3 1 1 6.3e-09 1.4e-06 21.6 0.3 9 156 226 367 215 378 0.79 # 30546 # 32132 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.551 1_31 - 228 UPF0020 PF01170.13 180 8.1e-06 19.5 0.0 1 2 8.1e-05 0.018 8.6 0.0 102 123 16 37 2 89 0.68 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_31 - 228 UPF0020 PF01170.13 180 8.1e-06 19.5 0.0 2 2 6.2e-05 0.013 9.0 0.0 28 54 163 189 158 221 0.67 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_20 - 742 cobW PF02492.14 178 0.00099 12.6 0.1 1 1 7.7e-06 0.0017 11.8 0.1 2 23 48 71 47 82 0.78 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 2_48 - 317 NAD_binding_3 PF03447.11 117 0.002 12.5 1.0 1 2 0.0001 0.022 9.2 0.0 1 71 10 82 10 97 0.72 # 56610 # 57560 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 2_48 - 317 NAD_binding_3 PF03447.11 117 0.002 12.5 1.0 2 2 0.059 13 0.3 0.1 73 107 279 312 276 315 0.80 # 56610 # 57560 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 3_34 - 288 FeoB_N PF02421.13 156 2.8e-05 17.4 0.0 1 1 2.3e-07 5e-05 16.6 0.0 3 57 39 94 37 160 0.90 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 1_26 - 389 MipZ PF09140.6 261 9.3e-06 18.8 0.4 1 2 3.5e-06 0.00076 12.6 0.0 2 47 108 153 107 157 0.87 # 33610 # 34776 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 389 MipZ PF09140.6 261 9.3e-06 18.8 0.4 2 2 0.0011 0.24 4.4 0.0 88 134 224 270 197 292 0.84 # 33610 # 34776 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_3 - 442 3HCDH_N PF02737.13 180 6.1e-11 36.3 0.5 1 2 6.2e-06 0.00067 13.3 0.1 2 34 6 38 5 72 0.91 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 3HCDH_N PF02737.13 180 6.1e-11 36.3 0.5 2 2 2.2e-08 2.4e-06 21.3 0.0 2 75 161 233 160 249 0.79 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_22 - 350 3HCDH_N PF02737.13 180 0.00099 12.8 0.3 1 1 1.4e-05 0.0015 12.2 0.3 1 56 177 232 177 256 0.74 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 3_34 - 288 AIG1 PF04548.11 212 0.00026 14.1 0.0 1 1 1.7e-06 0.00037 13.6 0.0 5 68 41 103 38 172 0.75 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 2_3 - 442 GIDA PF01134.17 392 1.6e-07 24.5 2.6 1 3 7.2e-08 1.6e-05 17.9 1.0 2 47 6 55 5 72 0.88 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 GIDA PF01134.17 392 1.6e-07 24.5 2.6 2 3 0.025 5.4 -0.3 0.0 103 150 84 129 64 138 0.82 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 GIDA PF01134.17 392 1.6e-07 24.5 2.6 3 3 0.0011 0.24 4.1 0.0 4 28 163 187 160 213 0.82 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_39 - 180 SSB PF00436.20 104 1.1e-39 128.5 0.2 1 1 6.5e-42 1.4e-39 128.2 0.2 1 101 6 109 6 112 0.96 # 42464 # 43003 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.598 1_82 - 1757 UvrD_C_2 PF13538.1 104 9.9e-08 26.1 0.7 1 2 0.0073 1.6 3.0 0.0 6 44 1227 1265 1223 1294 0.75 # 76493 # 81763 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 1_82 - 1757 UvrD_C_2 PF13538.1 104 9.9e-08 26.1 0.7 2 2 2.9e-08 6.3e-06 20.3 0.1 3 102 1341 1444 1339 1446 0.76 # 76493 # 81763 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 2_3 - 442 Pyr_redox_2 PF07992.9 201 2.8e-36 119.3 6.4 1 3 6e-24 4.3e-22 72.9 0.1 2 159 6 165 5 165 0.90 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 Pyr_redox_2 PF07992.9 201 2.8e-36 119.3 6.4 2 3 5.4e-07 3.9e-05 17.6 0.5 4 125 163 257 160 261 0.72 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 Pyr_redox_2 PF07992.9 201 2.8e-36 119.3 6.4 3 3 3.8e-11 2.8e-09 31.1 0.1 162 199 258 296 256 298 0.92 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 Pyr_redox_2 PF07992.9 201 5.3e-05 17.1 0.1 1 1 3.2e-06 0.00023 15.1 0.1 1 32 17 48 17 66 0.92 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 557 Pyr_redox_2 PF07992.9 201 0.0013 12.6 0.0 1 1 4.1e-05 0.0029 11.5 0.0 1 33 4 37 4 55 0.80 # 9266 # 10936 # -1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_27 - 529 AAA_2 PF07724.9 171 0.00024 15.0 0.0 1 1 3.5e-06 0.00076 13.4 0.0 4 116 240 357 237 391 0.75 # 30546 # 32132 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.551 1_61 - 876 DUF87 PF01935.12 229 2.5e-07 24.7 0.0 1 1 3.3e-09 7.1e-07 23.2 0.0 26 222 482 669 468 676 0.77 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_20 - 742 NB-ARC PF00931.17 287 0.0029 10.4 0.9 1 1 6.6e-05 0.014 8.2 0.9 17 110 44 205 30 219 0.72 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 2_22 - 350 Methyltransf_11 PF08241.7 95 0.00033 15.1 0.1 1 1 3.3e-06 0.00072 14.1 0.1 4 81 182 259 180 261 0.79 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 1_20 - 742 KAP_NTPase PF07693.9 325 3e-72 237.3 0.0 1 1 6.2e-74 4.5e-72 236.7 0.0 1 325 27 334 27 334 0.96 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 3_34 - 288 KAP_NTPase PF07693.9 325 0.0025 10.8 0.0 1 1 5.5e-05 0.004 10.1 0.0 5 40 22 56 20 59 0.80 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 4_7 - 699 KAP_NTPase PF07693.9 325 0.0066 9.4 3.8 1 2 0.004 0.29 4.0 0.1 30 59 51 78 45 91 0.91 # 3217 # 5313 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 4_7 - 699 KAP_NTPase PF07693.9 325 0.0066 9.4 3.8 2 2 0.0017 0.13 5.2 0.6 156 183 180 207 168 215 0.85 # 3217 # 5313 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 2_18 - 516 AAA_15 PF13175.1 415 0.0027 10.7 0.1 1 1 1.7e-05 0.0036 10.3 0.1 24 56 66 98 40 161 0.80 # 20467 # 22014 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.556 2_3 - 442 NAD_binding_7 PF13241.1 103 1.5e-05 19.3 0.2 1 2 9.2e-05 0.02 9.2 0.0 8 40 4 36 1 94 0.71 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 NAD_binding_7 PF13241.1 103 1.5e-05 19.3 0.2 2 2 0.0004 0.086 7.2 0.0 11 51 162 229 157 269 0.68 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_31 - 228 N6_N4_Mtase PF01555.13 231 1.6e-36 119.9 0.0 1 1 3.3e-36 7.1e-34 111.2 0.0 1 228 21 200 21 203 0.89 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_34 - 288 AAA_17 PF13207.1 121 0.00029 15.7 0.6 1 1 7.8e-06 0.00056 14.7 0.6 1 19 38 56 38 159 0.67 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 1_79 - 718 AAA_17 PF13207.1 121 0.00065 14.5 0.0 1 1 2e-05 0.0015 13.4 0.0 3 28 189 218 187 355 0.73 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_20 - 742 AAA_17 PF13207.1 121 0.0023 12.8 0.1 1 1 0.0001 0.0073 11.1 0.1 1 43 48 94 48 284 0.87 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 2_22 - 350 ADH_zinc_N_2 PF13602.1 127 2.9e-07 25.5 0.0 1 2 0.097 21 0.0 0.0 20 94 86 160 66 166 0.54 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 2_22 - 350 ADH_zinc_N_2 PF13602.1 127 2.9e-07 25.5 0.0 2 2 1e-08 2.2e-06 22.6 0.0 1 119 217 334 217 337 0.65 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 3_34 - 288 Miro PF08477.8 119 0.00071 14.1 0.0 1 1 5.5e-06 0.0012 13.4 0.0 2 25 39 62 38 128 0.78 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 1_61 - 876 MobB PF03205.9 140 0.00055 13.7 0.2 1 2 5.4e-05 0.0058 10.3 0.0 4 37 483 515 481 523 0.79 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 876 MobB PF03205.9 140 0.00055 13.7 0.2 2 2 0.069 7.5 0.3 0.0 25 64 695 732 690 744 0.86 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_79 - 718 MobB PF03205.9 140 0.0025 11.5 0.0 1 1 5.1e-05 0.0056 10.4 0.0 7 34 192 219 188 225 0.89 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_22 - 350 ADH_zinc_N PF00107.21 130 2.1e-30 98.9 0.1 1 1 3.1e-32 3.3e-30 98.3 0.1 1 129 185 308 185 309 0.97 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 2_3 - 442 ADH_zinc_N PF00107.21 130 0.00015 15.3 0.1 1 2 0.0036 0.39 4.3 0.0 38 65 193 220 188 225 0.87 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 ADH_zinc_N PF00107.21 130 0.00015 15.3 0.1 2 2 0.00023 0.025 8.1 0.0 28 97 346 415 343 428 0.81 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_51 - 122 CTP_transf_2 PF01467.21 157 0.0017 12.4 0.0 1 1 8.5e-06 0.0019 12.3 0.0 32 67 7 41 2 98 0.65 # 52085 # 52450 # 1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 2_48 - 317 Semialdhyde_dh PF01118.19 121 2.7e-18 60.4 0.0 1 1 3e-20 6.6e-18 59.2 0.0 1 117 5 119 5 123 0.92 # 56610 # 57560 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_26 - 389 ArsA_ATPase PF02374.10 305 3.8e-06 20.1 0.4 1 2 1.7e-06 0.00036 13.6 0.1 9 36 115 142 109 151 0.89 # 33610 # 34776 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 389 ArsA_ATPase PF02374.10 305 3.8e-06 20.1 0.4 2 2 0.0011 0.24 4.3 0.0 123 136 231 244 221 251 0.84 # 33610 # 34776 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_27 - 529 T2SE PF00437.15 272 0.0012 11.7 0.0 1 1 9.6e-06 0.0021 11.0 0.0 105 150 217 261 174 270 0.73 # 30546 # 32132 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.551 2_3 - 442 AdoHcyase_NAD PF00670.16 162 0.0078 10.1 0.0 1 2 3.6e-05 0.0078 10.1 0.0 25 53 5 33 1 104 0.86 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 AdoHcyase_NAD PF00670.16 162 0.0078 10.1 0.0 2 2 0.094 20 -1.1 0.0 68 116 356 405 347 424 0.75 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_22 - 350 Shikimate_DH PF01488.15 135 0.00018 15.6 0.0 1 1 1.6e-06 0.00035 14.7 0.0 12 88 175 250 168 276 0.81 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 4_6 - 86 Cytidylate_kin2 PF13189.1 179 0.00029 14.7 0.3 1 1 1.6e-06 0.00035 14.5 0.3 112 155 40 83 30 85 0.85 # 2273 # 2530 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.492 1_79 - 718 Zeta_toxin PF06414.7 201 0.00053 13.1 0.0 1 2 3.2e-05 0.0069 9.5 0.0 21 49 190 219 182 248 0.86 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_79 - 718 Zeta_toxin PF06414.7 201 0.00053 13.1 0.0 2 2 0.027 5.8 -0.1 0.0 54 92 283 322 279 342 0.85 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_3 - 442 NAD_binding_8 PF13450.1 68 3.9e-06 20.8 1.0 1 2 1.8e-05 0.0013 12.7 0.1 1 33 8 41 8 71 0.89 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 NAD_binding_8 PF13450.1 68 3.9e-06 20.8 1.0 2 2 0.0022 0.16 6.1 0.1 1 29 163 191 163 193 0.95 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 NAD_binding_8 PF13450.1 68 0.00012 16.1 0.0 1 1 3.9e-06 0.00028 14.9 0.0 1 29 20 48 20 50 0.93 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_9 - 557 NAD_binding_8 PF13450.1 68 0.00014 15.8 0.0 1 1 7.1e-06 0.00051 14.1 0.0 1 28 7 35 7 37 0.95 # 9266 # 10936 # -1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_9 - 557 GMC_oxred_N PF00732.14 296 4.5e-109 358.1 0.0 1 1 3.7e-111 8.1e-109 357.2 0.0 1 295 3 300 3 301 0.99 # 9266 # 10936 # -1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_48 - 317 F420_oxidored PF03807.12 96 2.4e-05 18.7 1.8 1 1 4.2e-07 4.5e-05 17.9 0.1 1 47 5 51 5 101 0.85 # 56610 # 57560 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 2_3 - 442 F420_oxidored PF03807.12 96 0.0019 12.6 7.1 1 2 0.0001 0.011 10.2 0.2 3 31 7 32 5 65 0.84 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 F420_oxidored PF03807.12 96 0.0019 12.6 7.1 2 2 0.005 0.54 4.8 0.1 2 30 161 186 160 195 0.87 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 FAD_binding_3 PF01494.14 356 3.3e-83 273.6 0.0 1 1 3.8e-85 4.1e-83 273.3 0.0 2 355 16 352 15 353 0.95 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_3 - 442 FAD_binding_3 PF01494.14 356 2.8e-05 17.3 0.4 1 2 4e-06 0.00043 13.3 0.1 2 35 4 37 3 42 0.91 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 FAD_binding_3 PF01494.14 356 2.8e-05 17.3 0.4 2 2 0.012 1.3 1.9 0.0 6 37 163 194 160 271 0.71 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_26 - 389 VirC1 PF07015.6 231 0.00014 14.9 0.1 1 2 0.00028 0.061 6.3 0.0 4 42 109 147 107 154 0.91 # 33610 # 34776 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 389 VirC1 PF07015.6 231 0.00014 14.9 0.1 2 2 0.0003 0.065 6.2 0.1 84 139 235 290 222 312 0.77 # 33610 # 34776 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_7 - 699 Arch_ATPase PF01637.13 234 0.00013 15.7 0.5 1 1 1e-05 0.0011 12.6 0.5 19 130 40 208 32 240 0.76 # 3217 # 5313 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 1_20 - 742 Arch_ATPase PF01637.13 234 0.0012 12.6 0.1 1 1 0.00012 0.013 9.2 0.1 20 51 46 80 38 235 0.75 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 4_7 - 699 AAA_16 PF13191.1 185 1.6e-07 25.5 0.0 1 1 4.8e-09 3.5e-07 24.4 0.0 27 166 44 212 30 236 0.65 # 3217 # 5313 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 1_79 - 718 AAA_16 PF13191.1 185 1e-05 19.6 0.0 1 1 5.9e-07 4.3e-05 17.6 0.0 21 60 182 222 179 262 0.81 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_20 - 742 AAA_16 PF13191.1 185 4.3e-05 17.5 3.0 1 1 4.4e-06 0.00032 14.7 1.1 24 175 46 225 36 233 0.49 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 3_34 - 288 AAA_18 PF13238.1 129 0.00042 14.6 0.0 1 1 2.7e-06 0.00059 14.2 0.0 1 18 39 56 39 153 0.84 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 2_48 - 317 GFO_IDH_MocA PF01408.17 120 1.8e-06 22.5 0.1 1 1 2.2e-08 4.8e-06 21.1 0.1 2 89 5 97 4 99 0.77 # 56610 # 57560 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_26 - 389 CbiA PF01656.18 195 2.2e-36 119.1 0.0 1 1 1.3e-38 2.9e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 33610 # 34776 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_34 - 288 IIGP PF05049.8 376 0.00022 14.1 0.0 1 1 1.7e-06 0.00037 13.4 0.0 26 106 27 104 14 125 0.78 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 2_3 - 442 HI0933_like PF03486.9 409 1e-09 31.3 0.1 1 2 1.1e-05 0.0012 11.4 0.0 2 35 5 38 4 82 0.90 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 HI0933_like PF03486.9 409 1e-09 31.3 0.1 2 2 1.2e-07 1.3e-05 17.8 0.0 81 164 172 252 164 271 0.91 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 HI0933_like PF03486.9 409 2.1e-05 17.1 0.6 1 2 8.7e-07 9.4e-05 14.9 0.5 2 35 17 50 16 52 0.93 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_44 - 555 HI0933_like PF03486.9 409 2.1e-05 17.1 0.6 2 2 0.05 5.4 -0.7 0.0 123 167 132 179 122 181 0.68 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_34 - 288 TIGR03594 TIGR03594 432 2.4e-13 43.5 0.0 1 1 1.3e-15 2.8e-13 43.3 0.0 150 300 15 161 5 247 0.69 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 3_34 - 288 AAA_29 PF13555.1 62 0.0015 12.1 0.0 1 1 1.4e-05 0.003 11.1 0.0 25 43 38 56 19 58 0.83 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 2_9 - 557 FAD_binding_2 PF00890.19 417 7.8e-06 18.9 0.0 1 2 2.5e-05 0.0028 10.5 0.0 1 32 4 36 4 39 0.92 # 9266 # 10936 # -1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_9 - 557 FAD_binding_2 PF00890.19 417 7.8e-06 18.9 0.0 2 2 0.00056 0.06 6.1 0.0 143 204 200 263 157 281 0.79 # 9266 # 10936 # -1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_3 - 442 FAD_binding_2 PF00890.19 417 2.7e-05 17.1 3.2 1 2 4e-07 4.3e-05 16.4 0.2 2 41 6 45 5 69 0.89 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 FAD_binding_2 PF00890.19 417 2.7e-05 17.1 3.2 2 2 0.026 2.8 0.6 0.2 370 407 260 298 218 302 0.78 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_27 - 529 AAA PF00004.24 132 5.3e-05 17.4 0.0 1 1 4.9e-07 0.00011 16.5 0.0 1 110 242 368 242 388 0.76 # 30546 # 32132 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.551 2_27 - 529 KR PF08659.5 181 4.4e-05 17.2 0.5 1 1 3.1e-07 6.7e-05 16.6 0.5 27 180 127 288 113 289 0.82 # 30546 # 32132 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.551 2_3 - 442 Thi4 PF01946.12 230 3e-06 20.4 0.2 1 2 3e-07 3.2e-05 17.1 0.0 20 57 6 43 1 73 0.84 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 Thi4 PF01946.12 230 3e-06 20.4 0.2 2 2 0.03 3.3 0.7 0.0 22 48 163 189 154 193 0.91 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 Thi4 PF01946.12 230 6.2e-05 16.2 0.1 1 1 9.7e-07 0.0001 15.4 0.1 18 48 16 46 7 49 0.92 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_27 - 529 Sigma54_activat PF00158.21 168 4.3e-67 218.8 0.1 1 1 5.4e-69 5.9e-67 218.3 0.1 2 167 219 393 218 394 0.96 # 30546 # 32132 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.551 3_34 - 288 Sigma54_activat PF00158.21 168 0.00075 13.0 0.0 1 1 1.2e-05 0.0013 12.2 0.0 9 44 23 58 19 71 0.89 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 2_3 - 442 Pyr_redox_3 PF13738.1 203 2.8e-10 34.5 0.6 1 3 0.00063 0.068 7.2 0.1 1 39 7 45 7 73 0.74 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 Pyr_redox_3 PF13738.1 203 2.8e-10 34.5 0.6 2 3 0.0015 0.17 5.9 0.0 117 196 107 187 91 194 0.75 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 Pyr_redox_3 PF13738.1 203 2.8e-10 34.5 0.6 3 3 4.7e-07 5.1e-05 17.4 0.0 82 155 199 267 190 287 0.86 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 Pyr_redox_3 PF13738.1 203 0.00054 14.0 0.3 1 2 6.6e-05 0.0072 10.4 0.3 1 31 19 48 19 68 0.93 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_44 - 555 Pyr_redox_3 PF13738.1 203 0.00054 14.0 0.3 2 2 0.05 5.4 1.0 0.0 89 146 125 187 84 210 0.75 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_34 - 288 MMR_HSR1 PF01926.18 116 9.5e-19 61.5 0.0 1 1 7.1e-21 1.5e-18 60.8 0.0 2 113 39 151 38 159 0.81 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 3_34 - 288 DUF258 PF03193.11 161 4.5e-06 19.9 0.0 1 1 4e-08 8.7e-06 19.0 0.0 27 67 27 68 8 110 0.73 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 1_79 - 718 TraG-D_C PF12696.2 128 3.2e-20 66.3 0.0 1 1 2.7e-22 5.8e-20 65.5 0.0 1 127 419 541 419 542 0.86 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_22 - 350 NAD_binding_2 PF03446.10 163 2.6e-06 21.4 0.2 1 1 5.2e-08 5.6e-06 20.3 0.2 4 76 181 256 176 288 0.74 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 2_3 - 442 NAD_binding_2 PF03446.10 163 0.001 12.9 0.1 1 1 5.5e-05 0.0059 10.4 0.0 6 36 8 38 3 97 0.76 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_26 - 389 AAA_31 PF13614.1 157 2.1e-09 31.5 0.0 1 2 1.4e-08 3e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 33610 # 34776 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 389 AAA_31 PF13614.1 157 2.1e-09 31.5 0.0 2 2 0.00018 0.039 7.9 0.1 110 152 227 268 223 272 0.84 # 33610 # 34776 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_31 - 228 Methyltransf_26 PF13659.1 117 3e-13 43.8 0.1 1 2 3.5e-09 7.5e-07 23.2 0.0 53 114 3 71 2 74 0.78 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_31 - 228 Methyltransf_26 PF13659.1 117 3e-13 43.8 0.1 2 2 9.7e-08 2.1e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_3 - 442 NAD_Gly3P_dh_N PF01210.18 157 2.6e-05 18.0 0.1 1 2 4.7e-05 0.01 9.6 0.1 3 73 7 74 5 93 0.63 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 NAD_Gly3P_dh_N PF01210.18 157 2.6e-05 18.0 0.1 2 2 0.0007 0.15 5.8 0.0 3 28 162 187 160 237 0.87 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_22 - 350 2-Hacid_dh_C PF02826.14 178 1.9e-07 24.4 0.0 1 1 4.3e-09 3.1e-07 23.7 0.0 36 96 175 242 165 253 0.72 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 2_3 - 442 2-Hacid_dh_C PF02826.14 178 6.6e-07 22.6 1.4 1 2 0.00022 0.016 8.4 0.0 38 69 5 36 1 88 0.85 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 2-Hacid_dh_C PF02826.14 178 6.6e-07 22.6 1.4 2 2 1.1e-05 0.00083 12.5 0.3 38 67 160 189 152 252 0.89 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 2-Hacid_dh_C PF02826.14 178 8.1e-05 15.8 0.0 1 3 0.00018 0.013 8.6 0.0 35 70 14 49 4 75 0.84 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_44 - 555 2-Hacid_dh_C PF02826.14 178 8.1e-05 15.8 0.0 2 3 0.01 0.74 2.9 0.0 84 124 140 180 127 182 0.89 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_44 - 555 2-Hacid_dh_C PF02826.14 178 8.1e-05 15.8 0.0 3 3 0.099 7.2 -0.3 0.0 143 167 327 351 322 362 0.80 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_47 - 319 XdhC_C PF13478.1 136 4.5e-21 69.6 0.0 1 1 4.6e-21 5e-19 63.0 0.0 36 136 197 301 180 301 0.81 # 35135 # 36091 # -1 # ID=3_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.599 2_3 - 442 XdhC_C PF13478.1 136 4.1e-06 21.1 0.2 1 2 7e-05 0.0075 10.6 0.0 2 47 7 53 6 81 0.75 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 XdhC_C PF13478.1 136 4.1e-06 21.1 0.2 2 2 0.00038 0.042 8.2 0.0 1 68 161 241 161 259 0.59 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_82 - 1757 AAA_30 PF13604.1 196 9.7e-44 143.3 14.8 1 2 4.4e-05 0.0032 11.0 4.1 7 147 420 552 416 562 0.84 # 76493 # 81763 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 1_82 - 1757 AAA_30 PF13604.1 196 9.7e-44 143.3 14.8 2 2 1.4e-43 9.9e-42 136.7 1.9 1 186 968 1156 968 1162 0.93 # 76493 # 81763 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 4_7 - 699 AAA_30 PF13604.1 196 5.4e-05 16.8 0.0 1 1 2.1e-06 0.00015 15.3 0.0 10 55 34 77 31 104 0.83 # 3217 # 5313 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 1_79 - 718 AAA_30 PF13604.1 196 0.0013 12.3 0.0 1 1 3.8e-05 0.0027 11.3 0.0 21 57 188 224 180 230 0.85 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_3 - 442 ApbA PF02558.11 151 9.1e-05 15.9 1.2 1 2 2.8e-06 0.00062 13.2 0.0 2 31 7 36 6 81 0.86 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 ApbA PF02558.11 151 9.1e-05 15.9 1.2 2 2 0.021 4.6 0.7 0.0 2 27 162 187 161 199 0.90 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_61 - 876 FtsK_SpoIIIE PF01580.13 205 9e-06 19.3 0.2 1 2 2e-06 0.00044 13.7 0.0 39 63 476 504 463 507 0.84 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 876 FtsK_SpoIIIE PF01580.13 205 9e-06 19.3 0.2 2 2 0.0038 0.83 3.0 0.1 75 167 530 626 529 632 0.85 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 3_22 - 397 TIGR02075 TIGR02075 233 1.4e-06 21.7 0.1 1 2 0.00098 0.21 4.8 0.0 3 49 35 80 33 101 0.87 # 15382 # 16572 # 1 # ID=3_22;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.552 3_22 - 397 TIGR02075 TIGR02075 233 1.4e-06 21.7 0.1 2 2 1e-06 0.00022 14.5 0.0 138 180 179 220 127 229 0.93 # 15382 # 16572 # 1 # ID=3_22;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.552 3_34 - 288 Dynamin_N PF00350.18 168 1.9e-11 38.1 0.0 1 2 3.6e-08 7.9e-06 19.8 0.0 1 41 39 80 39 84 0.90 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 3_34 - 288 Dynamin_N PF00350.18 168 1.9e-11 38.1 0.0 2 2 3.7e-07 8.1e-05 16.5 0.0 102 154 85 140 79 155 0.83 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 2_18 - 516 CoA_binding PF02629.14 96 1e-20 68.1 0.1 1 2 0.023 5 1.8 0.0 47 86 101 137 76 143 0.67 # 20467 # 22014 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.556 2_18 - 516 CoA_binding PF02629.14 96 1e-20 68.1 0.1 2 2 1.9e-21 4.2e-19 62.9 0.0 2 94 188 282 187 283 0.97 # 20467 # 22014 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.556 2_9 - 557 Lycopene_cycl PF05834.7 374 4.8e-05 16.3 0.0 1 1 6.7e-07 7.2e-05 15.8 0.0 1 33 4 35 4 42 0.92 # 9266 # 10936 # -1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_3 - 442 Lycopene_cycl PF05834.7 374 0.00021 14.2 2.9 1 2 2.3e-05 0.0025 10.7 0.1 3 36 7 38 5 43 0.90 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 Lycopene_cycl PF05834.7 374 0.00021 14.2 2.9 2 2 0.0036 0.39 3.5 0.1 96 142 212 257 197 271 0.74 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_22 - 350 ELFV_dehydrog PF00208.16 244 0.0012 12.4 0.0 1 1 9.4e-06 0.002 11.7 0.0 32 83 175 226 165 253 0.78 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 3_34 - 288 ABC_tran PF00005.22 137 6.8e-06 20.4 0.2 1 1 2.9e-07 3.1e-05 18.3 0.2 3 33 28 58 26 186 0.73 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 1_20 - 742 ABC_tran PF00005.22 137 4.3e-05 17.8 0.0 1 1 1.5e-06 0.00016 16.0 0.0 5 36 40 71 37 88 0.89 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 3_34 - 288 TIGR03263 TIGR03263 180 0.0022 11.3 0.0 1 1 1.6e-05 0.0034 10.7 0.0 6 39 41 74 36 88 0.86 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 1_31 - 228 Cons_hypoth95 PF03602.10 183 1.6e-05 18.4 0.0 1 2 0.00022 0.047 7.0 0.0 112 146 18 54 2 82 0.64 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_31 - 228 Cons_hypoth95 PF03602.10 183 1.6e-05 18.4 0.0 2 2 4e-05 0.0087 9.4 0.0 41 62 162 183 145 218 0.78 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_3 - 442 UDPG_MGDP_dh_N PF03721.9 185 9.9e-06 19.0 1.7 1 2 0.0016 0.18 5.2 0.1 4 32 7 35 5 42 0.91 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 UDPG_MGDP_dh_N PF03721.9 185 9.9e-06 19.0 1.7 2 2 9.2e-06 0.001 12.5 0.2 4 30 162 188 160 193 0.91 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 UDPG_MGDP_dh_N PF03721.9 185 0.00023 14.6 0.3 1 1 3.5e-06 0.00038 13.9 0.3 2 37 17 52 16 59 0.92 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_82 - 1757 AAA_19 PF13245.1 76 1.6e-07 25.1 1.3 1 1 8.9e-09 9.7e-07 22.5 0.3 7 76 981 1047 974 1047 0.74 # 76493 # 81763 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 1_20 - 742 AAA_19 PF13245.1 76 0.0012 12.6 0.0 1 1 2.9e-05 0.0031 11.3 0.0 10 50 46 85 38 86 0.82 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 1_61 - 876 AAA_10 PF12846.2 304 8.3e-49 160.6 0.0 1 1 1.3e-50 1.4e-48 159.8 0.0 1 294 479 768 479 774 0.88 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_79 - 718 AAA_10 PF12846.2 304 3.3e-10 33.8 0.0 1 1 5e-11 5.4e-09 29.8 0.0 3 296 187 494 186 500 0.70 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_3 - 442 DAO PF01266.19 358 1.1e-12 41.5 1.8 1 3 1.7e-07 1.2e-05 18.3 0.0 2 41 6 45 5 110 0.82 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 DAO PF01266.19 358 1.1e-12 41.5 1.8 2 3 0.001 0.074 5.9 0.1 4 31 163 190 160 193 0.92 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 DAO PF01266.19 358 1.1e-12 41.5 1.8 3 3 1.1e-06 8e-05 15.6 0.1 148 233 200 284 197 374 0.70 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_9 - 557 DAO PF01266.19 358 1.4e-07 24.7 0.0 1 2 6.7e-06 0.00048 13.0 0.0 1 33 4 37 4 40 0.95 # 9266 # 10936 # -1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_9 - 557 DAO PF01266.19 358 1.4e-07 24.7 0.0 2 2 0.0001 0.0074 9.1 0.0 146 214 197 274 159 339 0.81 # 9266 # 10936 # -1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_44 - 555 DAO PF01266.19 358 3.7e-05 16.7 0.5 1 2 1.7e-05 0.0012 11.7 0.1 2 30 18 46 17 49 0.95 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_44 - 555 DAO PF01266.19 358 3.7e-05 16.7 0.5 2 2 0.007 0.51 3.1 0.0 162 296 133 275 117 359 0.67 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_44 - 555 ThiF PF00899.16 136 0.0017 12.2 0.7 1 1 3e-05 0.0065 10.3 0.3 2 31 15 44 14 51 0.88 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_16 - 167 TIGR00019 TIGR00019 361 1.2e-23 77.2 1.5 1 1 7.5e-26 1.6e-23 76.8 1.5 222 312 69 158 62 160 0.83 # 9559 # 10059 # 1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 3_34 - 288 Adeno_IVa2 PF02456.10 370 0.0014 11.2 0.0 1 1 9.4e-06 0.002 10.7 0.0 79 116 27 64 4 69 0.74 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 2_3 - 442 Pyr_redox PF00070.22 80 2.6e-26 85.9 0.9 1 2 0.00065 0.071 7.6 0.2 2 33 6 37 5 43 0.92 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 Pyr_redox PF00070.22 80 2.6e-26 85.9 0.9 2 2 2.2e-25 2.3e-23 76.4 0.0 1 78 160 235 160 238 0.95 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 Pyr_redox PF00070.22 80 1e-06 23.1 0.0 1 1 4.5e-08 4.8e-06 20.9 0.1 2 37 18 52 17 66 0.90 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_79 - 718 TrwB_AAD_bind PF10412.4 386 1.2e-149 492.1 0.0 1 1 1.3e-151 1.4e-149 491.8 0.0 2 386 172 561 171 561 0.99 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_61 - 876 TrwB_AAD_bind PF10412.4 386 8.8e-07 21.8 0.1 1 2 4.8e-08 5.2e-06 19.2 0.0 15 53 479 517 470 547 0.80 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 876 TrwB_AAD_bind PF10412.4 386 8.8e-07 21.8 0.1 2 2 0.041 4.4 -0.3 0.0 261 317 713 769 684 772 0.92 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_82 - 1757 AAA_11 PF13086.1 236 0.00019 15.1 1.7 1 1 2.7e-06 0.00059 13.4 0.0 2 75 969 1039 968 1060 0.80 # 76493 # 81763 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 2_27 - 529 Sigma54_activ_2 PF14532.1 138 4.7e-22 72.5 0.0 1 1 9.7e-24 2.1e-21 70.4 0.0 1 138 219 398 219 398 0.85 # 30546 # 32132 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.551 1_79 - 718 T4SS-DNA_transf PF02534.9 469 1.3e-09 31.1 0.0 1 1 3.4e-11 3.7e-09 29.6 0.0 264 363 382 478 198 510 0.82 # 73624 # 75777 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_61 - 876 T4SS-DNA_transf PF02534.9 469 0.00044 12.8 0.0 1 2 0.0031 0.34 3.3 0.0 105 184 533 606 470 625 0.82 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 876 T4SS-DNA_transf PF02534.9 469 0.00044 12.8 0.0 2 2 0.00021 0.023 7.2 0.0 319 378 711 769 662 771 0.90 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_31 - 228 MethyltransfD12 PF02086.10 260 0.0013 12.2 0.0 1 2 0.023 5.1 0.4 0.0 178 188 21 31 13 86 0.85 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_31 - 228 MethyltransfD12 PF02086.10 260 0.0013 12.2 0.0 2 2 4e-05 0.0087 9.5 0.0 20 46 163 189 148 197 0.78 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_34 - 288 ArgK PF03308.11 267 8.1e-05 15.5 0.0 1 1 6.8e-07 0.00015 14.6 0.0 14 51 21 58 12 74 0.87 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 1_61 - 876 Pox_A32 PF04665.7 241 0.0018 11.5 0.0 1 1 2.3e-05 0.005 10.1 0.0 7 38 473 504 469 519 0.85 # 57561 # 60188 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 3_34 - 288 GTP_EFTU PF00009.22 188 0.00048 13.6 0.0 1 2 0.00064 0.14 5.6 0.0 5 31 38 62 34 87 0.83 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 3_34 - 288 GTP_EFTU PF00009.22 188 0.00048 13.6 0.0 2 2 0.00039 0.084 6.3 0.0 69 187 83 215 65 216 0.74 # 23178 # 24041 # -1 # ID=3_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568 1_20 - 742 UPF0079 PF02367.12 123 0.00075 13.1 0.0 1 1 7.9e-06 0.0017 12.0 0.0 10 42 41 73 31 81 0.84 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 2_3 - 442 TrkA_N PF02254.13 116 1.6e-05 18.9 0.8 1 2 6.1e-06 0.00067 13.7 0.0 2 31 7 36 6 40 0.91 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_3 - 442 TrkA_N PF02254.13 116 1.6e-05 18.9 0.8 2 2 0.027 3 1.9 0.0 3 30 163 190 162 227 0.83 # 2365 # 3690 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 2_44 - 555 TrkA_N PF02254.13 116 0.0011 12.9 0.0 1 1 2.6e-05 0.0029 11.6 0.0 1 41 18 58 18 69 0.87 # 52300 # 53964 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_22 - 350 AlaDh_PNT_C PF01262.16 168 8.8e-06 19.4 0.1 1 1 7.2e-08 1.6e-05 18.6 0.1 21 107 176 242 171 263 0.80 # 26573 # 27622 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 1_20 - 742 NACHT PF05729.7 166 1.9e-05 18.4 1.3 1 2 2.4e-05 0.0026 11.4 0.0 2 32 48 78 47 86 0.84 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 1_20 - 742 NACHT PF05729.7 166 1.9e-05 18.4 1.3 2 2 0.0041 0.44 4.2 0.0 48 99 478 541 461 582 0.81 # 26266 # 28491 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 4_7 - 699 NACHT PF05729.7 166 0.00011 15.8 0.0 1 2 8.2e-05 0.0089 9.7 0.0 3 28 44 69 42 82 0.90 # 3217 # 5313 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 4_7 - 699 NACHT PF05729.7 166 0.00011 15.8 0.0 2 2 0.0064 0.69 3.5 0.0 53 96 152 211 139 241 0.77 # 3217 # 5313 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 1_31 - 228 Methyltransf_15 PF09445.5 164 0.00061 13.4 0.0 1 2 0.012 2.7 1.5 0.0 53 80 4 30 2 34 0.91 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_31 - 228 Methyltransf_15 PF09445.5 164 0.00061 13.4 0.0 2 2 4.2e-05 0.0092 9.5 0.0 3 31 166 194 164 209 0.86 # 37987 # 38670 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_27 - 529 AAA_5 PF07728.9 139 1.8e-05 18.5 0.0 1 1 9.9e-07 0.00021 15.0 0.0 2 121 242 367 241 381 0.67 # 30546 # 32132 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.551 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/083ef8ca-e1c4-47b0-b45b-8576ce4ca353 # Target file: checkm_output/bins/pm529/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm529/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/083ef8ca-e1c4-47b0-b45b-8576ce4ca353 checkm_output/bins/pm529/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:07:01 2020 # [ok]