# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_18 - 368 TIGR02075 TIGR02075 233 1.6e-07 22.4 0.1 1 2 0.00088 0.034 4.9 0.0 3 49 6 51 4 72 0.87 # 12656 # 13759 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.558 1_18 - 368 TIGR02075 TIGR02075 233 1.6e-07 22.4 0.1 2 2 7.3e-07 2.8e-05 15.0 0.0 138 180 150 191 98 200 0.93 # 12656 # 13759 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.558 1_11 - 152 TIGR00019 TIGR00019 361 9.8e-22 68.5 0.3 1 2 0.079 3.1 -2.2 0.0 74 109 6 43 1 46 0.64 # 5910 # 6365 # 1 # ID=1_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.564 1_11 - 152 TIGR00019 TIGR00019 361 9.8e-22 68.5 0.3 2 2 4.3e-23 1.7e-21 67.7 0.2 222 282 89 149 81 151 0.89 # 5910 # 6365 # 1 # ID=1_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.564 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/df2fc6c1-c314-47b9-ba09-dc9c21c4d5cc # Target file: checkm_output/bins/pm515/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm515/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/df2fc6c1-c314-47b9-ba09-dc9c21c4d5cc checkm_output/bins/pm515/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:06:51 2020 # [ok]