# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_13 - 188 Methyltransf_12 PF08242.7 99 6e-06 19.7 0.0 1 1 8.2e-08 8.4e-06 19.2 0.0 1 99 55 144 55 144 0.90 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_22 - 228 UPF0020 PF01170.13 180 5.2e-05 15.8 0.0 1 2 0.00042 0.044 6.3 0.0 103 117 17 31 4 86 0.79 # 18491 # 19174 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_22 - 228 UPF0020 PF01170.13 180 5.2e-05 15.8 0.0 2 2 0.00016 0.017 7.6 0.0 28 54 163 189 158 220 0.72 # 18491 # 19174 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_11 - 232 cobW PF02492.14 178 0.00052 12.4 0.0 1 1 1.7e-05 0.00085 11.7 0.0 3 21 39 57 37 80 0.85 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_2 - 341 cobW PF02492.14 178 0.00084 11.8 0.0 1 1 2.8e-05 0.0014 11.0 0.0 4 30 5 31 3 53 0.72 # 489 # 1511 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_13 - 188 RrnaAD PF00398.15 262 2.5e-10 32.7 0.0 1 1 3.1e-12 3.2e-10 32.3 0.0 11 113 31 128 28 148 0.89 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_26 - 249 IstB_IS21 PF01695.12 178 7.7e-62 200.8 0.0 1 1 9.2e-64 9.5e-62 200.5 0.0 2 176 53 227 52 229 0.98 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_26 - 389 MipZ PF09140.6 261 4.4e-06 18.8 0.4 1 2 3.5e-06 0.00036 12.6 0.0 2 47 108 153 107 157 0.87 # 22170 # 23336 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_26 - 389 MipZ PF09140.6 261 4.4e-06 18.8 0.4 2 2 0.0011 0.12 4.4 0.0 88 134 224 270 197 292 0.84 # 22170 # 23336 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_13 - 188 Methyltransf_18 PF12847.2 112 1.3e-10 34.9 0.0 1 1 2.5e-12 2.6e-10 33.9 0.0 4 109 53 146 50 148 0.87 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_29 - 1604 UvrD_C_2 PF13538.1 104 3.6e-08 26.5 0.6 1 2 0.023 1.2 2.3 0.0 6 44 1227 1265 1223 1295 0.74 # 26677 # 31488 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 1_29 - 1604 UvrD_C_2 PF13538.1 104 3.6e-08 26.5 0.6 2 2 2.4e-08 1.3e-06 21.5 0.1 3 102 1341 1444 1339 1446 0.76 # 26677 # 31488 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 3_2 - 341 UvrD_C_2 PF13538.1 104 7.9e-05 15.8 0.0 1 1 3e-06 0.00016 14.8 0.0 37 103 247 329 224 330 0.65 # 489 # 1511 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_48 - 876 DUF87 PF01935.12 229 7.6e-08 25.3 0.0 1 1 6.7e-09 2.3e-07 23.8 0.0 26 222 482 669 468 676 0.77 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 1_51 - 54 DUF87 PF01935.12 229 0.00014 14.7 0.0 1 1 4.8e-06 0.00017 14.4 0.0 25 50 21 46 18 50 0.91 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 1_11 - 232 DUF87 PF01935.12 229 0.00023 13.9 0.0 1 2 5.1e-05 0.0017 11.1 0.1 26 44 39 57 21 59 0.91 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 DUF87 PF01935.12 229 0.00023 13.9 0.0 2 2 0.081 2.8 0.6 0.0 136 184 128 196 95 215 0.65 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 NB-ARC PF00931.17 287 0.00062 11.6 0.1 1 1 9.7e-06 0.001 10.9 0.1 18 37 35 54 24 65 0.87 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 AAA_22 PF13401.1 131 2.4e-05 17.4 0.7 1 1 6.8e-06 0.00018 14.7 0.7 3 25 35 57 31 207 0.82 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_2 - 341 AAA_22 PF13401.1 131 3.4e-05 16.9 0.0 1 1 9.5e-06 0.00024 14.2 0.0 8 111 5 155 4 167 0.75 # 489 # 1511 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_26 - 249 AAA_22 PF13401.1 131 8.5e-05 15.7 0.2 1 1 9.8e-06 0.00025 14.1 0.2 5 49 99 138 95 183 0.80 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_51 - 54 AAA_22 PF13401.1 131 0.00031 13.8 0.0 1 1 1.4e-05 0.00035 13.7 0.0 3 27 18 42 13 51 0.86 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 1_26 - 249 SRP54 PF00448.17 196 0.00023 13.6 0.1 1 2 2.8e-05 0.0028 10.0 0.1 3 33 100 130 98 136 0.92 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 SRP54 PF00448.17 196 0.00023 13.6 0.1 2 2 0.013 1.4 1.3 0.0 82 124 158 200 151 218 0.87 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 3_3 - 522 AAA_15 PF13175.1 415 3.5e-17 55.4 0.1 1 2 3.4e-09 1.8e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 522 AAA_15 PF13175.1 415 3.5e-17 55.4 0.1 2 2 3.3e-11 1.7e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_11 - 232 AAA_15 PF13175.1 415 0.00025 13.1 0.0 1 2 8e-05 0.0041 9.1 0.0 25 46 34 60 9 93 0.72 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 AAA_15 PF13175.1 415 0.00025 13.1 0.0 2 2 0.011 0.58 2.0 0.0 372 414 164 205 140 205 0.89 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_22 - 228 N6_N4_Mtase PF01555.13 231 3.1e-37 121.2 0.0 1 2 5.1e-16 5.2e-14 45.2 0.0 1 114 21 124 21 133 0.91 # 18491 # 19174 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_22 - 228 N6_N4_Mtase PF01555.13 231 3.1e-37 121.2 0.0 2 2 6.4e-25 6.5e-23 74.3 0.0 169 228 141 200 126 203 0.90 # 18491 # 19174 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_26 - 249 AAA_17 PF13207.1 121 2e-06 21.6 0.5 1 1 1.3e-07 4.3e-06 20.5 0.1 2 64 101 173 100 231 0.62 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_11 - 232 AAA_17 PF13207.1 121 2.9e-05 17.9 0.2 1 1 1.3e-06 4.5e-05 17.2 0.2 2 19 39 56 38 219 0.85 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_32 - 745 AAA_17 PF13207.1 121 0.00035 14.4 0.0 1 1 3.6e-05 0.0012 12.6 0.0 3 27 189 217 187 262 0.68 # 32204 # 34438 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 3_3 - 522 AAA_21 PF13304.1 303 6.4e-14 45.5 0.1 1 2 1.4e-06 7.3e-05 15.7 0.0 2 24 27 49 27 76 0.83 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 522 AAA_21 PF13304.1 303 6.4e-14 45.5 0.1 2 2 4.1e-10 2.1e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_11 - 232 AAA_21 PF13304.1 303 2.4e-13 43.6 0.0 1 2 3.7e-06 0.00019 14.3 0.1 1 22 38 59 38 71 0.87 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 AAA_21 PF13304.1 303 2.4e-13 43.6 0.0 2 2 6.2e-10 3.2e-08 26.8 0.0 234 301 141 205 134 206 0.96 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_48 - 876 MobB PF03205.9 140 0.00027 13.6 0.2 1 1 8.1e-05 0.0028 10.3 0.0 4 37 483 515 481 523 0.79 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 1_11 - 232 MobB PF03205.9 140 0.00027 13.6 0.0 1 1 1.4e-05 0.00049 12.8 0.0 3 20 39 56 37 108 0.84 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_26 - 249 MobB PF03205.9 140 0.00048 12.8 0.0 1 1 3.1e-05 0.0011 11.7 0.0 3 34 101 132 99 141 0.92 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_58 - 122 CTP_transf_2 PF01467.21 157 0.0012 11.8 0.0 1 1 1.3e-05 0.0014 11.7 0.0 36 67 12 41 2 98 0.64 # 55064 # 55429 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 2_26 - 389 ArsA_ATPase PF02374.10 305 1.8e-06 20.1 0.4 1 2 1.7e-06 0.00017 13.6 0.1 9 36 115 142 109 151 0.89 # 22170 # 23336 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_26 - 389 ArsA_ATPase PF02374.10 305 1.8e-06 20.1 0.4 2 2 0.0011 0.11 4.3 0.0 123 136 231 244 221 251 0.84 # 22170 # 23336 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 249 PhoH PF02562.11 205 7.5e-06 18.2 0.1 1 2 2.7e-07 2.8e-05 16.3 0.0 19 47 98 126 87 136 0.86 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 PhoH PF02562.11 205 7.5e-06 18.2 0.1 2 2 0.064 6.6 -1.2 0.0 138 177 152 190 143 199 0.69 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 T2SE PF00437.15 272 2.9e-06 19.2 0.0 1 1 8.7e-08 4.5e-06 18.6 0.0 99 148 67 118 29 126 0.81 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_51 - 54 T2SE PF00437.15 272 0.00036 12.4 0.0 1 1 7e-06 0.00036 12.4 0.0 112 155 6 46 1 51 0.77 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 1_26 - 249 AAA_26 PF13500.1 199 0.00048 12.7 0.0 1 1 6.6e-06 0.00068 12.2 0.0 5 60 103 160 99 200 0.71 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_51 - 54 Zeta_toxin PF06414.7 201 0.00033 12.7 0.1 1 1 3.4e-06 0.00035 12.6 0.1 14 40 17 43 6 49 0.79 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 3_3 - 522 SMC_N PF02463.14 220 2.6e-11 36.1 0.0 1 2 2.8e-11 1.4e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 522 SMC_N PF02463.14 220 2.6e-11 36.1 0.0 2 2 0.0047 0.24 3.5 0.0 163 204 281 321 253 330 0.85 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_11 - 232 SMC_N PF02463.14 220 2.9e-09 29.4 0.0 1 1 4.7e-09 2.4e-07 23.1 0.0 24 212 36 216 24 220 0.76 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_26 - 389 VirC1 PF07015.6 231 6.8e-05 14.9 0.1 1 2 0.00028 0.029 6.3 0.0 4 42 109 147 107 154 0.91 # 22170 # 23336 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_26 - 389 VirC1 PF07015.6 231 6.8e-05 14.9 0.1 2 2 0.0003 0.031 6.2 0.1 84 139 235 290 222 312 0.77 # 22170 # 23336 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_32 - 745 AAA_16 PF13191.1 185 3.8e-06 19.9 0.0 1 1 8.2e-07 2.1e-05 17.5 0.0 21 60 182 222 179 263 0.81 # 32204 # 34438 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_26 - 249 AAA_16 PF13191.1 185 5.5e-06 19.4 0.3 1 1 7.3e-07 1.9e-05 17.7 0.1 25 52 99 132 76 164 0.74 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_11 - 232 AAA_16 PF13191.1 185 6.3e-06 19.2 0.4 1 1 5.6e-07 1.4e-05 18.0 0.4 18 56 30 69 23 200 0.73 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_51 - 54 AAA_16 PF13191.1 185 8.1e-05 15.6 0.0 1 1 3.3e-06 8.5e-05 15.5 0.0 22 51 17 46 10 52 0.90 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 3_3 - 522 AAA_23 PF13476.1 202 3.4e-12 40.0 0.0 1 1 3.2e-13 1.7e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_11 - 232 AAA_23 PF13476.1 202 0.00051 13.3 0.0 1 1 1.4e-05 0.00073 12.8 0.0 19 39 36 56 18 94 0.84 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 AAA_18 PF13238.1 129 4.4e-05 16.8 0.7 1 1 6.1e-06 0.00031 14.0 0.7 1 19 39 57 39 214 0.88 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_26 - 249 AAA_18 PF13238.1 129 0.00013 15.3 0.1 1 1 5.9e-06 0.0003 14.0 0.0 1 45 101 147 101 205 0.72 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_11 - 232 AAA_13 PF13166.1 712 0.0017 9.7 0.0 1 2 3.4e-05 0.0035 8.7 0.0 20 42 40 62 25 94 0.83 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 AAA_13 PF13166.1 712 0.0017 9.7 0.0 2 2 0.093 9.6 -2.7 0.0 525 570 159 202 155 205 0.87 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_26 - 389 CbiA PF01656.18 195 1e-36 119.1 0.0 1 1 2.7e-38 1.4e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 22170 # 23336 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_26 - 249 CbiA PF01656.18 195 7.6e-05 15.1 0.1 1 1 2.9e-06 0.00015 14.2 0.1 5 30 104 129 101 136 0.91 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 KaiC PF06745.8 227 0.00011 14.3 0.0 1 1 3.8e-06 0.0002 13.5 0.0 17 53 96 131 79 167 0.83 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_11 - 232 KaiC PF06745.8 227 0.00049 12.2 0.1 1 1 1.9e-05 0.00097 11.2 0.1 7 35 25 52 22 66 0.88 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_26 - 249 AAA_14 PF13173.1 128 0.00011 15.0 0.0 1 1 3.7e-06 0.00019 14.3 0.0 3 72 99 170 97 240 0.74 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_11 - 232 AAA_14 PF13173.1 128 0.00056 12.8 0.0 1 1 2.5e-05 0.0013 11.6 0.0 2 41 36 75 35 131 0.63 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_3 - 522 AAA_29 PF13555.1 62 9.8e-08 24.5 0.0 1 1 5.6e-09 1.9e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_11 - 232 AAA_29 PF13555.1 62 2.8e-06 19.8 0.1 1 1 1.5e-07 5.2e-06 18.9 0.1 16 42 30 55 24 71 0.78 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_26 - 249 AAA_29 PF13555.1 62 0.00011 14.7 0.2 1 1 1.4e-05 0.00049 12.6 0.1 22 37 98 112 88 118 0.80 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 AAA PF00004.24 132 4e-06 20.0 0.0 1 1 5.6e-08 5.7e-06 19.5 0.0 1 66 101 167 101 227 0.86 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 Bac_DnaA PF00308.13 219 3.5e-07 23.0 0.0 1 1 5.2e-09 5.3e-07 22.4 0.0 37 136 101 198 83 204 0.88 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 Sigma54_activat PF00158.21 168 0.00011 14.6 0.0 1 1 1.9e-06 0.0002 13.8 0.0 20 52 96 128 82 185 0.82 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_11 - 232 MMR_HSR1 PF01926.18 116 0.00019 14.3 0.2 1 1 3.2e-06 0.00033 13.6 0.2 2 20 39 57 38 201 0.91 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_13 - 188 N6_Mtase PF02384.11 311 0.00092 11.2 0.0 1 1 3.4e-05 0.0035 9.3 0.0 28 62 32 66 29 75 0.91 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_11 - 232 DUF258 PF03193.11 161 1.4e-06 20.5 0.0 1 1 4.1e-08 2.1e-06 19.9 0.0 19 61 19 62 4 91 0.83 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_51 - 54 DUF258 PF03193.11 161 0.001 11.2 0.1 1 1 2e-05 0.001 11.2 0.1 36 62 20 46 4 50 0.80 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 1_32 - 745 TraG-D_C PF12696.2 128 8e-21 67.2 0.0 1 1 1.4e-22 1.5e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 32204 # 34438 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 2_26 - 389 AAA_31 PF13614.1 157 1e-09 31.5 0.0 1 2 1.4e-08 1.4e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 22170 # 23336 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_26 - 389 AAA_31 PF13614.1 157 1e-09 31.5 0.0 2 2 0.00018 0.019 7.9 0.1 110 152 227 268 223 272 0.84 # 22170 # 23336 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_11 - 232 NTPase_1 PF03266.10 168 0.0001 15.0 0.1 1 2 3.4e-05 0.0035 10.0 0.0 2 44 39 83 38 91 0.80 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 NTPase_1 PF03266.10 168 0.0001 15.0 0.1 2 2 0.0042 0.44 3.2 0.0 87 151 153 219 115 230 0.73 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 AAA_33 PF13671.1 143 0.00039 13.3 1.4 1 1 3.1e-05 0.0032 10.3 1.4 2 19 39 56 38 214 0.73 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_13 - 188 Methyltransf_26 PF13659.1 117 2e-13 43.4 0.1 1 1 1.1e-14 5.8e-13 41.9 0.0 2 114 52 147 51 150 0.91 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_22 - 228 Methyltransf_26 PF13659.1 117 2.2e-11 36.8 0.1 1 2 6.9e-07 3.6e-05 16.8 0.0 57 114 7 71 2 74 0.72 # 18491 # 19174 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_22 - 228 Methyltransf_26 PF13659.1 117 2.2e-11 36.8 0.1 2 2 2.9e-07 1.5e-05 18.0 0.0 4 44 167 206 164 222 0.82 # 18491 # 19174 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_29 - 1604 AAA_30 PF13604.1 196 1.9e-44 144.5 14.4 1 2 2.5e-05 0.00086 11.8 3.8 7 147 420 552 416 562 0.84 # 26677 # 31488 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 1_29 - 1604 AAA_30 PF13604.1 196 1.9e-44 144.5 14.4 2 2 1.7e-43 5.9e-42 136.4 2.1 1 186 968 1156 968 1162 0.94 # 26677 # 31488 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 1_11 - 232 AAA_30 PF13604.1 196 0.00011 14.8 0.4 1 1 5.6e-06 0.00019 14.0 0.4 18 58 36 76 29 202 0.87 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_32 - 745 AAA_30 PF13604.1 196 0.00062 12.3 0.0 1 1 3.9e-05 0.0014 11.2 0.0 21 57 188 224 180 230 0.85 # 32204 # 34438 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_51 - 54 FtsK_SpoIIIE PF01580.13 205 1.2e-06 21.1 0.1 1 1 3.5e-08 1.2e-06 21.1 0.1 27 66 7 47 1 50 0.83 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 1_48 - 876 FtsK_SpoIIIE PF01580.13 205 1.1e-05 17.9 0.1 1 2 6.1e-06 0.00021 13.7 0.0 39 63 476 504 463 507 0.84 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 1_48 - 876 FtsK_SpoIIIE PF01580.13 205 1.1e-05 17.9 0.1 2 2 0.034 1.2 1.5 0.0 75 166 530 625 529 637 0.79 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 1_11 - 232 FtsK_SpoIIIE PF01580.13 205 0.00014 14.4 0.0 1 1 1.1e-05 0.00039 12.9 0.0 37 60 35 58 14 77 0.81 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_13 - 188 MTS PF05175.9 170 2e-09 30.0 0.0 1 1 2.6e-11 2.7e-09 29.6 0.0 31 141 50 149 41 166 0.86 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 3_3 - 522 DUF2813 PF11398.3 373 3.3e-05 16.0 1.2 1 2 4.6e-06 0.00048 12.2 0.0 11 49 12 51 3 56 0.79 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 522 DUF2813 PF11398.3 373 3.3e-05 16.0 1.2 2 2 0.0067 0.69 1.8 0.0 287 333 279 326 250 333 0.82 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 2_13 - 188 Met_10 PF02475.11 200 0.0002 13.9 0.0 1 1 2.8e-06 0.00029 13.4 0.0 99 190 48 133 39 145 0.79 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_11 - 232 ABC_tran PF00005.22 137 2.5e-36 118.0 0.0 1 1 6.9e-38 3.5e-36 117.5 0.0 1 136 26 171 26 172 0.92 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_3 - 522 ABC_tran PF00005.22 137 0.00016 14.9 0.0 1 1 9.4e-06 0.00049 13.4 0.0 14 113 27 155 17 158 0.73 # 1496 # 3061 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_11 - 232 ATP-synt_ab PF00006.20 215 0.00028 13.4 0.1 1 1 8.3e-06 0.00086 11.8 0.1 8 35 29 56 23 74 0.86 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_22 - 228 Cons_hypoth95 PF03602.10 183 2.1e-05 16.9 0.0 1 2 0.00035 0.037 6.4 0.0 112 147 18 55 9 82 0.66 # 18491 # 19174 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_22 - 228 Cons_hypoth95 PF03602.10 183 2.1e-05 16.9 0.0 2 2 7e-05 0.0072 8.6 0.0 41 62 162 183 145 219 0.78 # 18491 # 19174 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_29 - 1604 AAA_19 PF13245.1 76 1.7e-07 23.9 1.9 1 1 1.5e-08 5.2e-07 22.4 0.5 7 76 981 1047 974 1047 0.74 # 26677 # 31488 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 1_26 - 249 AAA_19 PF13245.1 76 0.00016 14.4 0.0 1 1 1.1e-05 0.00036 13.2 0.0 8 33 98 120 84 137 0.78 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_11 - 232 AAA_19 PF13245.1 76 0.00019 14.1 0.1 1 1 5.4e-05 0.0018 11.0 0.0 10 54 36 75 29 87 0.75 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_48 - 876 AAA_10 PF12846.2 304 1.8e-49 161.7 0.0 1 1 1.5e-50 3.1e-49 160.9 0.0 1 294 479 768 479 774 0.89 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 745 AAA_10 PF12846.2 304 1.4e-10 33.9 0.0 1 1 1.3e-10 2.6e-09 29.8 0.0 3 296 187 494 186 500 0.68 # 32204 # 34438 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_11 - 232 AAA_10 PF12846.2 304 1.3e-05 17.6 0.0 1 1 1.7e-06 3.5e-05 16.3 0.0 4 29 39 65 37 85 0.76 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_26 - 249 AAA_10 PF12846.2 304 8.3e-05 15.0 0.1 1 1 7.8e-06 0.00016 14.1 0.1 2 33 99 130 98 132 0.92 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_51 - 54 AAA_10 PF12846.2 304 0.00017 14.0 0.0 1 1 9.7e-06 0.0002 13.8 0.0 2 25 20 43 19 47 0.87 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 1_11 - 232 SbcCD_C PF13558.1 90 8.8e-06 18.6 0.2 1 1 1.3e-06 0.00013 14.8 0.2 32 89 143 187 126 188 0.76 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_26 - 249 ResIII PF04851.10 184 2.7e-05 17.0 0.0 1 1 3.6e-07 3.7e-05 16.5 0.0 18 47 88 120 50 143 0.79 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_13 - 188 Methyltransf_31 PF13847.1 152 2.2e-07 23.5 0.0 1 1 2.6e-09 2.7e-07 23.2 0.0 5 119 52 162 48 183 0.82 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 3_2 - 341 Viral_helicase1 PF01443.13 234 6.7e-12 38.3 0.1 1 2 1.9e-07 2e-05 17.1 0.0 2 30 5 38 4 59 0.76 # 489 # 1511 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 3_2 - 341 Viral_helicase1 PF01443.13 234 6.7e-12 38.3 0.1 2 2 7.2e-08 7.4e-06 18.5 0.1 63 233 133 330 122 331 0.67 # 489 # 1511 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_26 - 249 DUF2075 PF09848.4 352 0.00094 11.1 0.0 1 1 1.3e-05 0.0013 10.6 0.0 1 50 98 144 98 160 0.81 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 DEAD PF00270.24 169 6.4e-05 15.4 0.0 1 1 8.6e-07 8.9e-05 15.0 0.0 14 62 98 143 84 197 0.87 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_32 - 745 TrwB_AAD_bind PF10412.4 386 2.7e-150 493.1 0.0 1 1 1.3e-151 3.4e-150 492.8 0.0 2 386 172 561 171 561 0.99 # 32204 # 34438 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_48 - 876 TrwB_AAD_bind PF10412.4 386 4.2e-07 21.8 0.1 1 2 9.6e-08 2.5e-06 19.2 0.0 15 53 479 517 470 547 0.80 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 1_48 - 876 TrwB_AAD_bind PF10412.4 386 4.2e-07 21.8 0.1 2 2 0.082 2.1 -0.3 0.0 261 317 713 769 685 772 0.92 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 1_51 - 54 TrwB_AAD_bind PF10412.4 386 6.1e-05 14.7 0.0 1 1 2.6e-06 6.7e-05 14.5 0.0 5 42 9 46 6 50 0.88 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 1_26 - 249 TrwB_AAD_bind PF10412.4 386 0.00066 11.3 0.0 1 1 3.7e-05 0.00094 10.7 0.0 14 43 97 126 84 144 0.84 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_29 - 1604 AAA_11 PF13086.1 236 4.6e-05 16.0 0.0 1 1 1.7e-06 0.00017 14.1 0.0 2 75 969 1039 968 1059 0.81 # 26677 # 31488 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.596 1_26 - 249 Sigma54_activ_2 PF14532.1 138 1.3e-05 18.2 0.0 1 1 2.9e-07 3e-05 17.0 0.0 20 111 97 202 85 229 0.65 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_32 - 745 T4SS-DNA_transf PF02534.9 469 4.9e-10 31.4 0.0 1 1 2.1e-11 1.1e-09 30.3 0.0 250 361 362 476 198 500 0.76 # 32204 # 34438 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_48 - 876 T4SS-DNA_transf PF02534.9 469 3e-05 15.6 0.0 1 2 0.00044 0.022 6.2 0.0 105 185 533 607 470 623 0.86 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 1_48 - 876 T4SS-DNA_transf PF02534.9 469 3e-05 15.6 0.0 2 2 0.00022 0.011 7.2 0.0 319 378 711 769 663 771 0.90 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 2_13 - 188 TIGR00755 TIGR00755 256 9.2e-10 30.8 0.0 1 1 1.2e-11 1.3e-09 30.4 0.0 9 105 30 123 29 134 0.91 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_51 - 54 Pox_A32 PF04665.7 241 4.7e-05 15.7 0.0 1 1 9.5e-07 4.9e-05 15.6 0.0 6 42 12 48 7 51 0.90 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 1_48 - 876 Pox_A32 PF04665.7 241 0.00087 11.5 0.0 1 1 4.6e-05 0.0024 10.1 0.0 7 38 473 504 469 519 0.85 # 47222 # 49849 # -1 # ID=1_48;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 2_13 - 188 Methyltransf_23 PF13489.1 161 2.6e-06 20.2 0.0 1 1 3.3e-08 3.4e-06 19.8 0.0 10 120 39 153 30 174 0.83 # 12220 # 12783 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_51 - 54 RNA_helicase PF00910.17 107 5.1e-05 16.4 0.0 1 1 5.9e-07 6.1e-05 16.2 0.0 1 30 22 51 22 53 0.91 # 51121 # 51282 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.444 3_2 - 341 UvrD-helicase PF00580.16 315 1e-08 27.7 0.1 1 2 5.9e-06 0.00061 12.0 0.1 16 69 4 49 2 78 0.83 # 489 # 1511 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 3_2 - 341 UvrD-helicase PF00580.16 315 1e-08 27.7 0.1 2 2 2.6e-06 0.00027 13.2 0.0 242 294 115 170 96 174 0.86 # 489 # 1511 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_11 - 232 NACHT PF05729.7 166 0.0002 14.0 0.1 1 1 1.7e-05 0.00088 11.9 0.0 3 20 39 56 37 76 0.86 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_26 - 249 NACHT PF05729.7 166 0.00038 13.1 1.2 1 1 2.1e-05 0.0011 11.6 0.7 3 24 101 122 99 190 0.90 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 AAA_25 PF13481.1 194 1.4e-07 24.1 0.1 1 1 5.7e-09 2.9e-07 23.0 0.1 28 63 93 129 83 197 0.72 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_11 - 232 AAA_25 PF13481.1 194 6.2e-06 18.6 0.0 1 2 1e-06 5.3e-05 15.6 0.0 29 58 32 62 14 131 0.78 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 AAA_25 PF13481.1 194 6.2e-06 18.6 0.0 2 2 0.034 1.7 0.9 0.0 161 188 175 201 165 206 0.69 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 AAA_28 PF13521.1 163 7.7e-07 22.1 0.1 1 2 1.2e-06 6e-05 16.0 0.0 2 21 39 58 38 94 0.79 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_11 - 232 AAA_28 PF13521.1 163 7.7e-07 22.1 0.1 2 2 0.0057 0.29 4.0 0.0 19 79 111 168 104 174 0.63 # 9728 # 10423 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_26 - 249 AAA_28 PF13521.1 163 9.8e-05 15.3 0.0 1 1 3.3e-06 0.00017 14.5 0.0 2 27 101 130 100 167 0.82 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 AAA_5 PF07728.9 139 0.00079 12.1 0.5 1 1 2.1e-05 0.0022 10.7 0.1 1 34 100 136 100 167 0.81 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_26 - 249 APS_kinase PF01583.15 157 4.1e-05 16.2 0.0 1 1 1.3e-06 0.00013 14.6 0.0 5 35 101 131 98 139 0.92 # 23641 # 24387 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/75518c7f-9694-4d4d-b287-d93d6052c46f # Target file: checkm_output/bins/pm501/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm501/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/75518c7f-9694-4d4d-b287-d93d6052c46f checkm_output/bins/pm501/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:06:44 2020 # [ok]