# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_28 - 266 Mg_chelatase PF01078.16 207 0.00093 12.1 0.0 1 1 1e-05 0.0018 11.1 0.0 23 42 98 117 84 124 0.89 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_48 - 181 Methyltransf_12 PF08242.7 99 0.00059 14.1 0.0 1 1 5.3e-06 0.00094 13.4 0.0 1 97 55 142 55 143 0.84 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_36 - 228 UPF0020 PF01170.13 180 3.8e-05 17.0 0.0 1 2 0.00096 0.086 6.1 0.0 103 117 17 31 4 75 0.83 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_36 - 228 UPF0020 PF01170.13 180 3.8e-05 17.0 0.0 2 2 0.00013 0.011 9.0 0.0 28 54 163 189 158 220 0.67 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_48 - 181 UPF0020 PF01170.13 180 0.0014 12.0 0.0 1 1 5.4e-05 0.0048 10.2 0.0 18 43 40 65 32 129 0.71 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_24 - 215 cobW PF02492.14 178 0.00085 12.5 0.8 1 1 2.4e-05 0.0022 11.2 0.8 3 46 3 48 1 130 0.69 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_7 - 232 cobW PF02492.14 178 0.0009 12.4 0.0 1 1 1.7e-05 0.0015 11.7 0.0 3 21 39 57 37 80 0.85 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_48 - 181 RrnaAD PF00398.15 262 8.1e-09 28.5 0.0 1 1 5.6e-11 1e-08 28.2 0.0 9 133 29 146 24 161 0.85 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_24 - 215 Thymidylate_kin PF02223.12 186 0.00079 12.5 0.3 1 2 2.2e-05 0.004 10.2 0.0 6 29 11 34 9 47 0.91 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 Thymidylate_kin PF02223.12 186 0.00079 12.5 0.3 2 2 0.03 5.4 0.0 0.0 115 165 128 186 108 210 0.52 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_28 - 266 IstB_IS21 PF01695.12 178 2.2e-77 252.2 0.7 1 1 5.2e-79 4.7e-77 251.1 0.0 1 177 51 227 51 228 0.99 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 IstB_IS21 PF01695.12 178 8.1e-73 237.3 0.1 1 2 0.098 8.8 -0.6 0.0 64 97 25 57 24 61 0.64 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_8 - 260 IstB_IS21 PF01695.12 178 8.1e-73 237.3 0.1 2 2 2e-74 1.7e-72 236.2 0.1 1 178 56 235 56 235 0.98 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_24 - 215 MipZ PF09140.6 261 3.4e-15 49.5 3.1 1 3 1.9e-11 3.4e-09 29.8 0.2 2 53 2 52 1 61 0.88 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 MipZ PF09140.6 261 3.4e-15 49.5 3.1 2 3 3.3e-08 5.9e-06 19.2 0.2 84 145 64 125 59 134 0.90 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 MipZ PF09140.6 261 3.4e-15 49.5 3.1 3 3 0.059 10 -1.3 0.0 219 254 182 207 172 210 0.56 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 YhjQ PF06564.7 244 0.00097 12.2 0.8 1 2 3.3e-05 0.0058 9.7 0.2 6 36 5 35 1 39 0.87 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 YhjQ PF06564.7 244 0.00097 12.2 0.8 2 2 0.015 2.7 0.9 0.0 99 160 62 124 49 131 0.63 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_50 - 176 SSB PF00436.20 104 4.4e-41 132.7 0.4 1 1 3.4e-43 6e-41 132.3 0.4 1 101 6 109 6 112 0.96 # 38650 # 39177 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_48 - 181 Methyltransf_18 PF12847.2 112 3e-08 28.0 0.0 1 1 3.7e-10 6.5e-08 26.9 0.0 4 106 53 143 50 147 0.88 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_78 - 494 DUF87 PF01935.12 229 4.9e-07 23.5 0.0 1 1 1.3e-08 7.7e-07 22.8 0.0 26 221 100 286 86 294 0.75 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 1_71 - 107 DUF87 PF01935.12 229 0.00024 14.7 0.0 1 1 5.9e-06 0.00035 14.1 0.0 25 50 74 99 72 103 0.91 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_7 - 232 DUF87 PF01935.12 229 0.0004 13.9 0.0 1 2 5.1e-05 0.003 11.1 0.1 26 44 39 57 21 59 0.91 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 DUF87 PF01935.12 229 0.0004 13.9 0.0 2 2 0.081 4.8 0.6 0.0 136 184 128 196 95 215 0.65 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 NB-ARC PF00931.17 287 0.0011 11.6 0.1 1 1 9.7e-06 0.0017 10.9 0.1 18 37 35 54 24 65 0.87 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_28 - 266 AAA_22 PF13401.1 131 5.6e-07 23.5 0.3 1 2 0.00013 0.0046 10.8 0.0 5 21 98 114 94 134 0.85 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_28 - 266 AAA_22 PF13401.1 131 5.6e-07 23.5 0.3 2 2 0.00018 0.0065 10.3 0.1 77 121 147 195 132 203 0.72 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 AAA_22 PF13401.1 131 2.6e-06 21.3 0.2 1 2 0.00011 0.004 11.0 0.0 5 21 103 119 99 131 0.83 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_8 - 260 AAA_22 PF13401.1 131 2.6e-06 21.3 0.2 2 2 0.0018 0.065 7.1 0.0 88 103 154 181 126 203 0.66 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_7 - 232 AAA_22 PF13401.1 131 4.2e-05 17.4 0.7 1 1 8.5e-06 0.0003 14.7 0.7 3 25 35 57 31 207 0.82 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_71 - 107 AAA_22 PF13401.1 131 7.4e-05 16.6 0.0 1 1 4.3e-06 0.00015 15.6 0.0 3 27 71 95 66 103 0.87 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_108 - 590 AAA_22 PF13401.1 131 0.00071 13.5 0.0 1 1 0.00012 0.0041 11.0 0.0 3 49 488 541 484 561 0.79 # 75608 # 77377 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.602 1_24 - 215 SRP54 PF00448.17 196 4.7e-11 36.2 0.3 1 1 5e-13 8.9e-11 35.3 0.3 6 98 4 93 1 98 0.79 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_28 - 266 AAA_3 PF07726.6 131 0.0015 11.9 0.0 1 1 1.4e-05 0.0026 11.1 0.0 2 75 100 171 99 222 0.74 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 232 AAA_15 PF13175.1 415 0.00044 13.1 0.0 1 2 4e-05 0.0072 9.1 0.0 25 46 34 60 9 93 0.72 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 AAA_15 PF13175.1 415 0.00044 13.1 0.0 2 2 0.0056 1 2.0 0.0 372 414 164 205 140 205 0.89 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_36 - 228 N6_N4_Mtase PF01555.13 231 5.7e-35 114.5 0.0 1 1 8.4e-35 1.5e-32 106.6 0.0 1 228 21 200 21 203 0.90 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_28 - 266 AAA_17 PF13207.1 121 1.9e-05 19.2 0.0 1 1 2.2e-06 0.0001 16.9 0.0 2 64 100 156 99 200 0.57 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 232 AAA_17 PF13207.1 121 5e-05 17.9 0.2 1 1 1.7e-06 7.8e-05 17.2 0.2 2 19 39 56 38 219 0.85 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_103 - 710 AAA_17 PF13207.1 121 0.00058 14.4 0.0 1 1 2.7e-05 0.0012 13.4 0.0 3 28 189 218 187 353 0.74 # 71793 # 73922 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_24 - 215 AAA_17 PF13207.1 121 0.00069 14.2 0.1 1 1 2.1e-05 0.00094 13.8 0.1 9 76 11 85 2 183 0.69 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_7 - 232 AAA_21 PF13304.1 303 4.2e-13 43.6 0.0 1 2 1.9e-06 0.00033 14.3 0.1 1 22 38 59 38 71 0.87 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 AAA_21 PF13304.1 303 4.2e-13 43.6 0.0 2 2 3.1e-10 5.5e-08 26.8 0.0 234 301 141 205 134 206 0.96 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_24 - 215 MobB PF03205.9 140 0.00027 14.4 0.2 1 1 9.1e-06 0.00054 13.4 0.2 5 39 4 39 1 88 0.70 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_78 - 494 MobB PF03205.9 140 0.00047 13.6 0.1 1 1 4.1e-05 0.0024 11.3 0.0 4 37 101 133 99 141 0.79 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 2_7 - 232 MobB PF03205.9 140 0.00047 13.6 0.0 1 1 1.4e-05 0.00085 12.8 0.0 3 20 39 56 37 108 0.84 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_24 - 215 ArsA_ATPase PF02374.10 305 2e-08 27.3 3.9 1 2 3.2e-08 2.9e-06 20.2 0.8 6 38 5 38 1 39 0.85 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 ArsA_ATPase PF02374.10 305 2e-08 27.3 3.9 2 2 0.0002 0.018 7.7 0.0 96 135 46 87 35 89 0.83 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_28 - 266 ArsA_ATPase PF02374.10 305 0.0012 11.6 0.0 1 1 2.1e-05 0.0018 11.0 0.0 6 38 102 134 98 169 0.91 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 PhoH PF02562.11 205 1.5e-07 24.5 0.2 1 1 1.1e-08 6.3e-07 22.5 0.0 11 48 94 131 83 159 0.83 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 266 PhoH PF02562.11 205 2.7e-06 20.5 0.0 1 1 1e-07 6.2e-06 19.3 0.0 15 47 93 125 80 149 0.87 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_108 - 590 PhoH PF02562.11 205 0.00023 14.1 0.2 1 1 9.8e-06 0.00058 12.8 0.0 3 53 471 525 469 539 0.87 # 75608 # 77377 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.602 1_28 - 266 AFG1_ATPase PF03969.11 362 2.4e-06 20.3 0.0 1 1 3.6e-08 3.2e-06 19.8 0.0 63 227 98 258 53 263 0.80 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 AFG1_ATPase PF03969.11 362 0.00013 14.6 0.2 1 1 5.5e-06 0.00049 12.6 0.2 63 216 103 254 43 259 0.72 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_71 - 107 T2SE PF00437.15 272 0.0012 11.5 0.0 1 1 6.9e-06 0.0012 11.4 0.0 109 154 56 98 16 103 0.79 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_24 - 215 SKI PF01202.17 158 0.0012 12.4 0.4 1 2 0.0009 0.16 5.5 0.2 2 16 11 25 10 31 0.89 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 SKI PF01202.17 158 0.0012 12.4 0.4 2 2 0.0013 0.24 5.0 0.0 87 150 31 95 24 109 0.72 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 Zeta_toxin PF06414.7 201 0.00021 14.1 0.0 1 1 6e-06 0.00036 13.4 0.0 20 109 4 94 1 103 0.79 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_71 - 107 Zeta_toxin PF06414.7 201 0.00032 13.5 0.1 1 1 7.4e-06 0.00044 13.1 0.1 14 40 70 96 60 102 0.85 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_103 - 710 Zeta_toxin PF06414.7 201 0.0015 11.4 0.0 1 1 0.0001 0.006 9.4 0.0 21 49 190 219 182 236 0.85 # 71793 # 73922 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_7 - 232 SMC_N PF02463.14 220 5e-09 29.4 0.0 1 1 2.3e-09 4.1e-07 23.1 0.0 24 212 36 216 24 220 0.76 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_24 - 215 VirC1 PF07015.6 231 3.9e-08 26.3 0.1 1 1 2.6e-10 4.7e-08 26.1 0.1 8 201 7 200 1 210 0.72 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 Fer4_NifH PF00142.13 273 0.00015 14.7 1.0 1 2 2.2e-06 0.00038 13.4 0.3 8 37 9 38 1 52 0.86 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 Fer4_NifH PF00142.13 273 0.00015 14.7 1.0 2 2 0.031 5.5 -0.3 0.0 189 210 67 88 42 149 0.59 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_28 - 266 Arch_ATPase PF01637.13 234 0.0006 13.2 0.0 1 1 3.3e-05 0.003 11.0 0.0 18 120 95 192 81 196 0.61 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 Arch_ATPase PF01637.13 234 0.0017 11.8 0.1 1 1 6.9e-05 0.0061 9.9 0.0 8 37 90 119 87 140 0.79 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_103 - 710 AAA_16 PF13191.1 185 6.7e-06 19.9 0.0 1 1 9.6e-07 3.4e-05 17.6 0.0 21 60 182 222 179 263 0.81 # 71793 # 73922 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_7 - 232 AAA_16 PF13191.1 185 1.1e-05 19.2 0.4 1 1 7e-07 2.5e-05 18.0 0.4 18 56 30 69 23 200 0.73 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_28 - 266 AAA_16 PF13191.1 185 1.3e-05 19.0 1.5 1 2 0.067 2.4 1.8 0.0 127 173 25 88 3 93 0.61 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_28 - 266 AAA_16 PF13191.1 185 1.3e-05 19.0 1.5 2 2 1.1e-05 0.0004 14.1 0.7 23 51 96 124 88 195 0.82 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_71 - 107 AAA_16 PF13191.1 185 3e-05 17.8 0.1 1 1 1.7e-06 6.1e-05 16.8 0.1 22 51 70 99 65 104 0.91 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_8 - 260 AAA_16 PF13191.1 185 0.00011 16.0 1.0 1 1 1.5e-05 0.00053 13.7 0.1 16 41 97 119 84 146 0.78 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_7 - 232 AAA_23 PF13476.1 202 0.00089 13.3 0.0 1 1 7.1e-06 0.0013 12.8 0.0 19 39 36 56 18 94 0.84 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 AAA_18 PF13238.1 129 7.5e-05 16.8 0.7 1 1 9.1e-06 0.00054 14.0 0.7 1 19 39 57 39 214 0.88 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_24 - 215 AAA_18 PF13238.1 129 0.0008 13.5 0.2 1 1 2.9e-05 0.0017 12.4 0.1 8 42 11 45 9 135 0.74 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_28 - 266 AAA_18 PF13238.1 129 0.00093 13.2 0.3 1 1 4.4e-05 0.0026 11.8 0.2 1 19 100 118 100 160 0.82 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 232 AAA_13 PF13166.1 712 0.0029 9.7 0.0 1 2 3.4e-05 0.0061 8.7 0.0 20 42 40 62 25 94 0.83 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 AAA_13 PF13166.1 712 0.0029 9.7 0.0 2 2 0.093 17 -2.7 0.0 525 570 159 202 155 205 0.87 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_24 - 215 CbiA PF01656.18 195 8.4e-18 58.2 0.0 1 1 1.3e-19 1.2e-17 57.7 0.0 2 148 4 138 3 182 0.72 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_28 - 266 CbiA PF01656.18 195 0.00012 15.2 0.0 1 1 1.9e-06 0.00017 14.8 0.0 9 63 107 171 100 249 0.67 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_48 - 181 Methyltransf_25 PF13649.1 101 0.00056 14.0 0.0 1 1 4.7e-06 0.00084 13.4 0.0 1 93 54 135 54 142 0.77 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_7 - 232 KaiC PF06745.8 227 0.00085 12.2 0.1 1 1 9.4e-06 0.0017 11.2 0.1 7 35 25 52 22 66 0.88 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_28 - 266 AAA_14 PF13173.1 128 5.5e-08 26.5 0.0 1 1 3.7e-09 2.2e-07 24.6 0.0 3 96 98 197 96 206 0.72 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 AAA_14 PF13173.1 128 2.1e-06 21.4 0.0 1 1 6.8e-08 4e-06 20.5 0.0 2 96 102 203 101 221 0.67 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_7 - 232 AAA_14 PF13173.1 128 0.00097 12.8 0.0 1 1 3.7e-05 0.0022 11.6 0.0 2 41 36 75 35 131 0.63 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 AAA_29 PF13555.1 62 4.8e-06 19.8 0.1 1 1 1e-07 9.1e-06 18.9 0.1 16 42 30 55 24 71 0.78 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 260 AAA_29 PF13555.1 62 0.0013 12.0 0.0 1 1 2.9e-05 0.0026 11.1 0.0 19 59 98 139 89 141 0.72 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 266 AAA PF00004.24 132 8.3e-09 29.5 0.0 1 1 2.6e-10 2.3e-08 28.1 0.0 1 74 100 174 100 202 0.73 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 AAA PF00004.24 132 3.3e-07 24.3 0.0 1 1 6.3e-09 5.6e-07 23.5 0.0 1 74 105 180 105 214 0.77 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 266 Bac_DnaA PF00308.13 219 4.3e-12 39.8 0.0 1 1 7.9e-14 7.1e-12 39.1 0.0 36 139 99 199 71 212 0.87 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 Bac_DnaA PF00308.13 219 1.9e-09 31.2 0.0 1 1 3.2e-11 2.8e-09 30.6 0.0 37 136 105 202 75 207 0.85 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_8 - 260 Sigma54_activat PF00158.21 168 0.00024 14.3 0.1 1 1 1.6e-05 0.0015 11.8 0.1 18 53 98 133 82 198 0.72 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 266 Sigma54_activat PF00158.21 168 0.0006 13.0 0.1 1 1 0.00031 0.027 7.6 0.1 19 42 94 117 82 191 0.79 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 232 MMR_HSR1 PF01926.18 116 0.00033 14.3 0.2 1 1 3.2e-06 0.00056 13.6 0.2 2 20 39 57 38 201 0.91 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 DUF258 PF03193.11 161 2.5e-06 20.5 0.0 1 1 6.1e-08 3.6e-06 19.9 0.0 19 61 19 62 4 91 0.83 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 260 DUF258 PF03193.11 161 2.3e-05 17.4 0.0 1 1 5.9e-07 3.5e-05 16.8 0.0 21 78 88 157 70 192 0.71 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_71 - 107 DUF258 PF03193.11 161 0.0018 11.2 0.0 1 1 3.8e-05 0.0022 10.9 0.0 36 62 73 99 46 103 0.80 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_103 - 710 TraG-D_C PF12696.2 128 1.3e-20 67.3 0.0 1 1 1.3e-22 2.3e-20 66.5 0.0 1 127 419 541 419 542 0.86 # 71793 # 73922 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 3_4 - 754 TruB_N PF01509.13 149 0.00055 13.8 0.0 1 1 6.4e-06 0.0011 12.8 0.0 20 103 10 99 7 114 0.81 # 2192 # 4453 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 1_24 - 215 AAA_31 PF13614.1 157 2.2e-09 31.2 0.2 1 2 1e-09 1.9e-07 24.9 0.1 2 42 2 42 1 70 0.86 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 AAA_31 PF13614.1 157 2.2e-09 31.2 0.2 2 2 0.0022 0.4 4.3 0.0 106 134 67 95 60 109 0.82 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_7 - 232 NTPase_1 PF03266.10 168 0.00017 15.0 0.1 1 2 0.0001 0.0061 10.0 0.0 2 44 39 83 38 91 0.80 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 NTPase_1 PF03266.10 168 0.00017 15.0 0.1 2 2 0.013 0.75 3.2 0.0 87 151 153 219 115 230 0.73 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 260 NTPase_1 PF03266.10 168 0.00042 13.8 0.1 1 2 0.0049 0.29 4.5 0.1 2 30 105 133 104 153 0.83 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_8 - 260 NTPase_1 PF03266.10 168 0.00042 13.8 0.1 2 2 0.00074 0.044 7.2 0.0 88 112 157 181 144 204 0.72 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 266 NTPase_1 PF03266.10 168 0.00054 13.4 0.0 1 2 0.0017 0.1 6.0 0.0 2 17 100 115 99 129 0.80 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_28 - 266 NTPase_1 PF03266.10 168 0.00054 13.4 0.0 2 2 0.0031 0.18 5.2 0.0 83 107 147 170 136 197 0.76 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_24 - 215 AAA_33 PF13671.1 143 0.00024 14.7 0.1 1 2 2.5e-05 0.0015 12.2 0.1 9 85 11 94 4 175 0.73 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_24 - 215 AAA_33 PF13671.1 143 0.00024 14.7 0.1 2 2 0.084 5 0.7 0.0 75 96 145 166 129 207 0.77 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_28 - 266 AAA_33 PF13671.1 143 0.00056 13.5 0.0 1 1 2.3e-05 0.0014 12.3 0.0 2 40 100 143 100 169 0.64 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 232 AAA_33 PF13671.1 143 0.00067 13.3 1.4 1 1 9.2e-05 0.0054 10.3 1.4 2 19 39 56 38 214 0.73 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_24 - 215 KTI12 PF08433.5 270 0.00027 13.9 0.1 1 1 6.6e-06 0.00059 12.8 0.0 11 49 11 49 1 64 0.86 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_28 - 266 KTI12 PF08433.5 270 0.0011 11.8 0.0 1 1 2.3e-05 0.0021 11.0 0.0 4 82 100 170 99 199 0.78 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_48 - 181 Methyltransf_26 PF13659.1 117 1.6e-11 38.0 0.0 1 1 3.4e-13 3e-11 37.1 0.0 2 111 52 144 51 150 0.89 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_36 - 228 Methyltransf_26 PF13659.1 117 4.9e-11 36.4 0.1 1 2 1.2e-06 0.0001 16.0 0.0 57 114 7 71 2 87 0.70 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_36 - 228 Methyltransf_26 PF13659.1 117 4.9e-11 36.4 0.1 2 2 2e-07 1.8e-05 18.5 0.0 4 44 167 206 164 222 0.82 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_109 - 352 AAA_30 PF13604.1 196 1.3e-14 47.9 0.5 1 1 7.2e-16 2.6e-14 47.0 0.3 104 186 1 83 1 87 0.95 # 77338 # 78393 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.607 1_108 - 590 AAA_30 PF13604.1 196 9e-12 38.7 0.4 1 2 0.016 0.57 3.4 0.0 92 147 4 56 2 66 0.78 # 75608 # 77377 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.602 1_108 - 590 AAA_30 PF13604.1 196 9e-12 38.7 0.4 2 2 1.6e-11 5.8e-10 32.8 0.1 1 51 472 526 472 542 0.82 # 75608 # 77377 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.602 2_7 - 232 AAA_30 PF13604.1 196 0.00019 14.8 0.4 1 1 9.3e-06 0.00033 14.0 0.4 18 58 36 76 29 202 0.87 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_103 - 710 AAA_30 PF13604.1 196 0.0011 12.3 0.0 1 1 6.2e-05 0.0022 11.3 0.0 21 57 188 224 180 230 0.85 # 71793 # 73922 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_71 - 107 AAA_30 PF13604.1 196 0.0018 11.6 0.0 1 2 0.01 0.36 4.1 0.0 20 74 6 60 1 67 0.86 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_71 - 107 AAA_30 PF13604.1 196 0.0018 11.6 0.0 2 2 0.0025 0.088 6.1 0.1 14 39 69 93 61 101 0.75 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_71 - 107 FtsK_SpoIIIE PF01580.13 205 1e-06 22.1 0.0 1 1 2.1e-08 1.3e-06 21.8 0.0 9 66 41 100 34 103 0.80 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_78 - 494 FtsK_SpoIIIE PF01580.13 205 6.8e-06 19.4 0.1 1 2 3.1e-06 0.00018 14.7 0.0 39 63 94 122 81 125 0.84 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 1_78 - 494 FtsK_SpoIIIE PF01580.13 205 6.8e-06 19.4 0.1 2 2 0.018 1.1 2.4 0.0 75 166 148 243 147 288 0.81 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 2_7 - 232 FtsK_SpoIIIE PF01580.13 205 0.00023 14.4 0.0 1 1 1.1e-05 0.00068 12.9 0.0 37 60 35 58 14 77 0.81 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_48 - 181 MTS PF05175.9 170 8.7e-08 25.4 0.0 1 1 6.8e-10 1.2e-07 25.0 0.0 31 115 50 129 41 141 0.84 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_28 - 266 AAA_35 PF14516.1 331 0.00071 11.9 0.2 1 3 0.0049 0.87 1.8 0.1 237 272 10 42 5 59 0.79 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_28 - 266 AAA_35 PF14516.1 331 0.00071 11.9 0.2 2 3 0.0042 0.75 2.0 0.0 21 75 87 141 75 153 0.77 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_28 - 266 AAA_35 PF14516.1 331 0.00071 11.9 0.2 3 3 0.00079 0.14 4.4 0.1 122 161 153 192 144 199 0.90 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_48 - 181 Met_10 PF02475.11 200 0.0021 11.4 0.0 1 1 1.5e-05 0.0027 11.0 0.0 98 188 47 131 29 143 0.80 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_7 - 232 ABC_tran PF00005.22 137 4.3e-36 118.0 0.0 1 1 6.9e-38 6.1e-36 117.5 0.0 1 136 26 171 26 172 0.92 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 260 ABC_tran PF00005.22 137 0.00026 15.0 0.3 1 1 2.4e-05 0.0021 12.1 0.0 8 30 99 121 93 136 0.86 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_7 - 232 ATP-synt_ab PF00006.20 215 0.00048 13.4 0.1 1 1 8.3e-06 0.0015 11.8 0.1 8 35 29 56 23 74 0.86 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_36 - 228 Cons_hypoth95 PF03602.10 183 3.4e-05 17.0 0.0 1 2 0.00061 0.11 5.6 0.0 112 127 18 33 9 81 0.69 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_36 - 228 Cons_hypoth95 PF03602.10 183 3.4e-05 17.0 0.0 2 2 3.9e-05 0.007 9.5 0.0 41 62 162 183 145 219 0.78 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_28 - 266 RuvB_N PF05496.7 234 1.9e-05 17.5 0.1 1 1 4.3e-07 3.8e-05 16.5 0.1 48 119 95 176 73 187 0.73 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 RuvB_N PF05496.7 234 0.00059 12.6 0.0 1 1 1.3e-05 0.0012 11.7 0.0 50 119 102 182 92 190 0.65 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 266 AAA_19 PF13245.1 76 1.4e-07 24.9 0.1 1 1 1.2e-08 5.2e-07 23.1 0.0 13 52 100 135 87 150 0.83 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 232 AAA_19 PF13245.1 76 0.00033 14.1 0.1 1 1 7.2e-05 0.0032 11.0 0.0 10 54 36 75 29 87 0.75 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_24 - 215 AAA_19 PF13245.1 76 0.00036 14.0 0.5 1 1 2.1e-05 0.00095 12.7 0.4 20 56 11 45 3 64 0.81 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 260 AAA_19 PF13245.1 76 0.00073 13.0 0.0 1 1 4.2e-05 0.0019 11.7 0.0 10 37 103 129 96 154 0.81 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_78 - 494 AAA_10 PF12846.2 304 1.5e-49 162.7 0.0 1 1 6.9e-51 2e-49 162.3 0.0 1 299 97 391 97 394 0.89 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 1_103 - 710 AAA_10 PF12846.2 304 2.3e-10 34.0 0.0 1 1 1.7e-10 5e-09 29.7 0.0 3 296 187 494 186 500 0.68 # 71793 # 73922 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_71 - 107 AAA_10 PF12846.2 304 7.8e-06 19.2 0.0 1 2 0.013 0.39 3.7 0.0 273 290 25 42 8 54 0.81 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_71 - 107 AAA_10 PF12846.2 304 7.8e-06 19.2 0.0 2 2 1.2e-05 0.00036 13.7 0.0 2 25 73 96 72 100 0.88 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_8 - 260 AAA_10 PF12846.2 304 1.3e-05 18.4 0.6 1 1 5.7e-06 0.00017 14.8 0.1 1 33 102 134 102 171 0.89 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_7 - 232 AAA_10 PF12846.2 304 2.3e-05 17.6 0.0 1 1 2e-06 6e-05 16.3 0.0 4 29 39 65 37 85 0.76 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_28 - 266 AAA_10 PF12846.2 304 0.00019 14.6 0.0 1 1 1.2e-05 0.00037 13.7 0.0 2 35 98 131 97 173 0.88 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 232 SbcCD_C PF13558.1 90 1.5e-05 18.6 0.2 1 1 1.3e-06 0.00023 14.8 0.2 32 89 143 187 126 188 0.76 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 260 ResIII PF04851.10 184 0.00066 13.2 0.0 1 2 6.9e-05 0.012 9.1 0.0 8 50 89 127 50 135 0.78 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_8 - 260 ResIII PF04851.10 184 0.00066 13.2 0.0 2 2 0.0077 1.4 2.4 0.0 112 163 131 181 125 203 0.72 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 181 Methyltransf_31 PF13847.1 152 0.0011 12.3 0.0 1 1 8e-06 0.0014 11.9 0.0 5 102 52 140 48 148 0.88 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_24 - 215 DUF2075 PF09848.4 352 1.4e-05 17.8 0.1 1 1 9.3e-08 1.6e-05 17.7 0.1 5 95 4 90 1 137 0.75 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_28 - 266 TIP49 PF06068.8 398 0.00075 11.9 0.1 1 2 0.00012 0.021 7.2 0.1 52 71 99 118 89 135 0.79 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_28 - 266 TIP49 PF06068.8 398 0.00075 11.9 0.1 2 2 0.003 0.53 2.6 0.0 295 357 181 238 158 251 0.73 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_28 - 266 DEAD PF00270.24 169 0.00079 12.7 0.1 1 1 3.3e-05 0.0059 9.8 0.1 13 64 96 144 83 203 0.68 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_103 - 710 TrwB_AAD_bind PF10412.4 386 5.9e-150 492.8 0.0 1 1 1.2e-151 7.2e-150 492.5 0.0 2 386 172 561 171 561 0.99 # 71793 # 73922 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_78 - 494 TrwB_AAD_bind PF10412.4 386 4.6e-07 22.4 0.3 1 2 3.4e-08 2e-06 20.3 0.0 15 53 97 135 88 167 0.80 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 1_78 - 494 TrwB_AAD_bind PF10412.4 386 4.6e-07 22.4 0.3 2 2 0.077 4.5 -0.6 0.1 261 317 331 387 325 390 0.90 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 1_71 - 107 TrwB_AAD_bind PF10412.4 386 0.00012 14.4 0.0 1 2 0.016 0.93 1.7 0.0 288 335 18 65 8 70 0.83 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_71 - 107 TrwB_AAD_bind PF10412.4 386 0.00012 14.4 0.0 2 2 1e-05 0.00061 12.1 0.1 5 42 62 99 58 103 0.87 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_108 - 590 AAA_11 PF13086.1 236 0.00084 12.6 0.0 1 1 8.2e-06 0.0015 11.9 0.0 2 44 473 523 472 573 0.70 # 75608 # 77377 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.602 1_28 - 266 Sigma54_activ_2 PF14532.1 138 0.00055 13.7 0.0 1 1 1.2e-05 0.0021 11.8 0.0 17 111 93 201 82 223 0.69 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_103 - 710 T4SS-DNA_transf PF02534.9 469 1.2e-09 30.9 0.0 1 1 3.2e-11 2.9e-09 29.7 0.0 264 363 382 478 198 511 0.82 # 71793 # 73922 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_78 - 494 T4SS-DNA_transf PF02534.9 469 2.5e-05 16.7 0.1 1 2 0.0021 0.18 3.9 0.0 105 182 151 222 88 240 0.82 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 1_78 - 494 T4SS-DNA_transf PF02534.9 469 2.5e-05 16.7 0.1 2 2 2e-05 0.0018 10.5 0.0 319 378 329 387 279 389 0.89 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 1_48 - 181 TIGR00755 TIGR00755 256 6e-09 28.9 0.0 1 1 4.5e-11 8e-09 28.5 0.0 8 105 29 123 25 133 0.91 # 37248 # 37790 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_36 - 228 MethyltransfD12 PF02086.10 260 0.00095 12.3 0.0 1 2 0.027 4.8 0.2 0.1 175 188 18 31 8 38 0.80 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_36 - 228 MethyltransfD12 PF02086.10 260 0.00095 12.3 0.0 2 2 4e-05 0.0071 9.5 0.0 20 46 163 189 148 197 0.78 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_28 - 266 ArgK PF03308.11 267 0.00019 14.0 0.0 1 1 2.3e-06 0.0004 12.9 0.0 27 66 95 134 81 136 0.85 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_71 - 107 Pox_A32 PF04665.7 241 0.00021 14.3 0.0 1 2 0.039 3.5 0.5 0.0 2 28 41 66 40 70 0.76 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_71 - 107 Pox_A32 PF04665.7 241 0.00021 14.3 0.0 2 2 9.4e-06 0.00083 12.4 0.0 8 42 67 101 60 104 0.89 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_78 - 494 Pox_A32 PF04665.7 241 0.00098 12.1 0.0 1 1 2.3e-05 0.0021 11.1 0.0 7 38 91 122 87 137 0.84 # 55799 # 57280 # 1 # ID=1_78;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 1_11 - 657 Plug PF07715.10 108 6.8e-24 78.1 1.9 1 1 2.3e-25 2e-23 76.5 1.9 3 108 46 149 44 149 0.94 # 6986 # 8956 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.489 3_4 - 754 Plug PF07715.10 108 2.6e-10 34.4 4.8 1 1 2.9e-12 2.6e-10 34.4 4.8 13 107 61 166 43 167 0.89 # 2192 # 4453 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 1_71 - 107 RNA_helicase PF00910.17 107 9.6e-05 16.3 0.0 1 1 1.1e-06 0.0002 15.3 0.0 1 29 75 103 75 106 0.91 # 52087 # 52407 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_28 - 266 AAA_24 PF13479.1 213 0.0013 12.1 0.0 1 1 1.3e-05 0.0024 11.2 0.0 5 23 99 117 95 151 0.86 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_28 - 266 NACHT PF05729.7 166 0.00024 14.5 0.4 1 1 6.1e-05 0.0054 10.1 0.4 3 21 100 118 98 218 0.88 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 232 NACHT PF05729.7 166 0.00034 14.0 0.1 1 1 1.7e-05 0.0015 11.9 0.0 3 20 39 56 37 76 0.86 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_28 - 266 AAA_25 PF13481.1 194 1.2e-06 21.8 0.1 1 1 5.4e-08 2.4e-06 20.8 0.1 22 65 81 130 60 186 0.70 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 232 AAA_25 PF13481.1 194 1.1e-05 18.6 0.0 1 2 2.1e-06 9.1e-05 15.6 0.0 29 58 32 62 14 131 0.78 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 AAA_25 PF13481.1 194 1.1e-05 18.6 0.0 2 2 0.068 3 0.9 0.0 161 188 175 201 165 206 0.69 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 260 AAA_25 PF13481.1 194 4.5e-05 16.6 0.0 1 1 1.7e-06 7.4e-05 15.9 0.0 22 58 90 127 71 183 0.79 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_24 - 215 AAA_25 PF13481.1 194 5.8e-05 16.3 0.6 1 1 3.4e-06 0.00015 14.9 0.3 41 149 9 85 2 109 0.65 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_36 - 228 Methyltransf_15 PF09445.5 164 0.0014 11.9 0.0 1 2 0.042 7.5 -0.2 0.0 53 79 4 29 2 33 0.90 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_36 - 228 Methyltransf_15 PF09445.5 164 0.0014 11.9 0.0 2 2 4.3e-05 0.0077 9.5 0.0 3 31 166 194 164 208 0.86 # 30932 # 31615 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_5 - 86 ABC_tran_2 PF12848.2 85 0.008 9.8 6.4 1 1 5.8e-05 0.01 9.4 6.4 20 76 17 76 13 84 0.75 # 2619 # 2876 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 2_7 - 232 AAA_28 PF13521.1 163 1.3e-06 22.1 0.1 1 2 1.7e-06 0.0001 16.0 0.0 2 21 39 58 38 94 0.79 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_7 - 232 AAA_28 PF13521.1 163 1.3e-06 22.1 0.1 2 2 0.0086 0.51 4.0 0.0 19 79 111 168 104 174 0.63 # 2188 # 2883 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_28 - 266 AAA_28 PF13521.1 163 8.9e-05 16.2 1.0 1 2 1.6e-05 0.00093 12.9 0.1 2 47 100 150 99 162 0.68 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_28 - 266 AAA_28 PF13521.1 163 8.9e-05 16.2 1.0 2 2 0.014 0.83 3.3 0.0 95 135 144 178 131 200 0.71 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_8 - 260 AAA_28 PF13521.1 163 0.0018 11.9 1.6 1 1 8.9e-05 0.0053 10.4 0.2 1 43 104 151 104 172 0.70 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_8 - 260 AAA_5 PF07728.9 139 5.3e-05 16.7 0.3 1 1 7.2e-06 0.00065 13.2 0.2 1 74 104 173 104 180 0.72 # 4670 # 5449 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 266 AAA_5 PF07728.9 139 0.00015 15.3 2.4 1 1 4.5e-06 0.0004 13.8 0.7 1 19 99 117 99 192 0.84 # 23564 # 24361 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_24 - 215 APS_kinase PF01583.15 157 5e-06 20.0 0.1 1 1 5.8e-08 1e-05 18.9 0.1 11 43 10 42 2 53 0.88 # 21005 # 21649 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/a487862c-4199-4338-906d-b9b07f0328d7 # Target file: checkm_output/bins/pm464/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm464/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a487862c-4199-4338-906d-b9b07f0328d7 checkm_output/bins/pm464/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:06:18 2020 # [ok]