# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_52 - 340 Mg_chelatase PF01078.16 207 9.4e-06 17.2 0.0 1 1 2.3e-07 1.5e-05 16.5 0.0 23 56 172 205 158 225 0.87 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 IstB_IS21 PF01695.12 178 4.4e-05 15.2 0.0 1 1 1.2e-06 8e-05 14.4 0.0 44 68 168 192 137 194 0.86 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_14 - 223 MipZ PF09140.6 261 9e-13 40.1 2.5 1 2 4.9e-07 3.2e-05 15.4 0.7 3 38 5 41 3 56 0.82 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_14 - 223 MipZ PF09140.6 261 9e-13 40.1 2.5 2 2 1e-09 6.8e-08 24.1 0.0 86 128 69 111 63 115 0.89 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_52 - 340 NB-ARC PF00931.17 287 0.00018 12.7 0.0 1 2 1.1e-05 0.00073 10.7 0.0 18 40 170 192 123 204 0.87 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 NB-ARC PF00931.17 287 0.00018 12.7 0.0 2 2 0.038 2.5 -0.9 0.0 154 201 247 302 229 319 0.68 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_45 - 506 AAA_22 PF13401.1 131 5.5e-05 15.7 0.0 1 1 3.8e-06 0.00012 14.5 0.0 3 31 239 267 234 306 0.82 # 28831 # 30348 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.507 1_52 - 340 AAA_22 PF13401.1 131 0.00015 14.2 0.0 1 1 9.8e-06 0.00032 13.2 0.0 5 31 172 198 143 240 0.81 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 ATP_bind_1 PF03029.12 238 0.00021 13.2 0.0 1 1 7.6e-06 0.0005 11.9 0.0 1 24 176 199 176 205 0.85 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_14 - 223 SRP54 PF00448.17 196 0.00014 13.7 0.8 1 1 7.4e-06 0.00049 11.9 0.8 5 94 5 92 2 116 0.67 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_52 - 340 AAA_17 PF13207.1 121 2.4e-06 20.7 0.0 1 1 1.4e-07 4.7e-06 19.8 0.0 3 22 175 194 173 262 0.86 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_14 - 223 AAA_17 PF13207.1 121 0.00014 15.0 0.0 1 2 5.5e-05 0.0018 11.4 0.0 9 104 13 116 11 135 0.58 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_14 - 223 AAA_17 PF13207.1 121 0.00014 15.0 0.0 2 2 0.068 2.2 1.5 0.0 42 107 162 211 144 218 0.69 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_52 - 340 Miro PF08477.8 119 0.00041 13.2 0.0 1 1 1.9e-05 0.0013 11.6 0.0 2 92 174 285 173 293 0.62 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 MobB PF03205.9 140 9.9e-05 14.4 0.0 1 2 2e-05 0.0013 10.8 0.0 4 24 175 195 173 211 0.79 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 MobB PF03205.9 140 9.9e-05 14.4 0.0 2 2 0.02 1.3 1.0 0.0 74 104 291 323 270 334 0.77 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_14 - 223 ArsA_ATPase PF02374.10 305 2.5e-07 22.3 0.0 1 1 1.2e-08 4e-07 21.6 0.0 7 59 9 62 3 93 0.80 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_45 - 506 ArsA_ATPase PF02374.10 305 0.00044 11.6 0.0 1 1 3.1e-05 0.001 10.4 0.0 5 71 244 311 241 359 0.78 # 28831 # 30348 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.507 1_52 - 340 T2SE PF00437.15 272 2e-65 212.7 0.0 1 1 1.1e-66 2.3e-65 212.4 0.0 4 266 17 315 14 321 0.96 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_45 - 506 T2SE PF00437.15 272 2.2e-40 130.5 0.0 1 1 1.8e-41 3.9e-40 129.7 0.0 11 252 113 360 104 377 0.89 # 28831 # 30348 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.507 1_41 - 313 T2SE PF00437.15 272 8.5e-22 69.6 0.4 1 1 5.2e-23 1.2e-21 69.1 0.4 117 259 107 254 71 266 0.83 # 25991 # 26929 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.482 1_52 - 340 G-alpha PF00503.15 389 7.1e-06 17.2 0.0 1 2 5.6e-07 3.7e-05 14.8 0.0 53 120 166 244 131 300 0.73 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 G-alpha PF00503.15 389 7.1e-06 17.2 0.0 2 2 0.023 1.5 -0.4 0.1 301 313 308 320 299 325 0.82 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 Zeta_toxin PF06414.7 201 4.9e-05 14.8 0.0 1 1 3.1e-06 0.0001 13.7 0.0 12 48 167 204 156 239 0.82 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_41 - 313 Zeta_toxin PF06414.7 201 0.00032 12.1 0.1 1 1 3e-05 0.00098 10.5 0.1 14 39 115 140 104 153 0.82 # 25991 # 26929 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.482 1_14 - 223 VirC1 PF07015.6 231 4.5e-07 21.4 0.0 1 1 1.4e-08 9.4e-07 20.4 0.0 5 51 6 53 3 59 0.87 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_14 - 223 Fer4_NifH PF00142.13 273 0.00012 13.6 0.1 1 1 3.4e-06 0.00022 12.7 0.1 8 36 11 40 5 46 0.84 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_52 - 340 AAA_16 PF13191.1 185 0.00011 14.5 0.0 1 1 2.9e-06 0.00019 13.8 0.0 24 51 171 198 138 222 0.84 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_45 - 506 AAA_23 PF13476.1 202 8.8e-05 15.2 0.1 1 1 1.4e-05 0.00031 13.4 0.0 17 38 220 259 211 264 0.72 # 28831 # 30348 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.507 1_41 - 313 AAA_23 PF13476.1 202 0.00016 14.4 0.0 1 1 1e-05 0.00023 13.8 0.0 18 40 116 138 94 235 0.84 # 25991 # 26929 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.482 1_52 - 340 AAA_23 PF13476.1 202 0.00018 14.2 7.0 1 2 0.087 1.9 1.0 0.3 101 127 127 153 46 173 0.57 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 AAA_23 PF13476.1 202 0.00018 14.2 7.0 2 2 0.00013 0.0028 10.3 7.7 22 39 174 191 129 195 0.89 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 AAA_18 PF13238.1 129 1.1e-05 18.1 0.0 1 1 3.5e-07 2.3e-05 17.0 0.0 2 39 175 216 175 250 0.74 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_8 - 196 AAA_13 PF13166.1 712 0.00046 11.0 7.6 1 1 1.2e-05 0.00077 10.2 7.6 324 428 14 117 2 123 0.82 # 4262 # 4849 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.372 1_14 - 223 CbiA PF01656.18 195 1.7e-17 55.8 1.0 1 1 1.2e-18 4.1e-17 54.5 1.0 2 168 6 164 5 184 0.74 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_9 - 233 CbiA PF01656.18 195 1.7e-05 16.6 2.6 1 1 3.5e-05 0.0011 10.6 2.6 2 174 6 148 5 170 0.71 # 4895 # 5593 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.385 1_41 - 313 KaiC PF06745.8 227 0.00035 12.0 0.0 1 1 8.7e-06 0.00058 11.3 0.0 22 68 120 164 115 186 0.85 # 25991 # 26929 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.482 1_19 - 175 B5 PF03484.10 70 0.00038 12.6 0.0 1 2 0.00018 0.012 7.8 0.0 8 40 3 36 1 51 0.78 # 13938 # 14462 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.495 1_19 - 175 B5 PF03484.10 70 0.00038 12.6 0.0 2 2 0.0068 0.45 2.8 0.0 18 45 107 133 80 158 0.74 # 13938 # 14462 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.495 1_6 - 122 tRNA-synt_1d PF00750.14 354 0.0003 11.9 0.1 1 1 5.1e-06 0.00033 11.8 0.1 200 248 47 95 27 108 0.88 # 2681 # 3046 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.396 1_52 - 340 AAA_29 PF13555.1 62 1.2e-06 20.4 0.0 1 1 8.6e-08 2.9e-06 19.1 0.0 24 51 172 199 160 204 0.84 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_45 - 506 AAA_29 PF13555.1 62 5.5e-05 15.0 0.1 1 1 4.2e-06 0.00014 13.7 0.1 20 39 238 256 230 264 0.85 # 28831 # 30348 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.507 1_52 - 340 AAA PF00004.24 132 6.9e-05 15.4 0.0 1 1 2.2e-06 0.00015 14.3 0.0 2 22 175 195 174 250 0.82 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 Sigma54_activat PF00158.21 168 2.6e-05 16.0 0.0 1 1 1.4e-06 9.1e-05 14.3 0.0 13 44 162 193 152 279 0.87 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_9 - 233 MMR_HSR1 PF01926.18 116 4.8e-06 18.9 0.0 1 1 1.4e-07 9e-06 18.0 0.0 9 88 13 101 11 168 0.61 # 4895 # 5593 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.385 1_51 - 599 TraG-D_C PF12696.2 128 5.3e-25 80.1 0.0 1 1 1.4e-26 9.1e-25 79.3 0.0 1 126 417 541 417 543 0.80 # 35050 # 36846 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.415 1_14 - 223 AAA_31 PF13614.1 157 4.5e-07 22.2 0.0 1 2 5.5e-06 0.00018 13.8 0.0 2 35 4 38 3 46 0.82 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_14 - 223 AAA_31 PF13614.1 157 4.5e-07 22.2 0.0 2 2 0.0028 0.092 5.0 0.0 104 151 68 114 53 116 0.84 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_9 - 233 AAA_31 PF13614.1 157 0.0002 13.6 0.2 1 2 0.0092 0.3 3.3 0.0 3 21 5 23 5 25 0.91 # 4895 # 5593 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.385 1_9 - 233 AAA_31 PF13614.1 157 0.0002 13.6 0.2 2 2 0.00034 0.011 7.9 0.0 100 138 47 84 40 109 0.82 # 4895 # 5593 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.385 1_45 - 506 NTPase_1 PF03266.10 168 0.00026 13.0 0.0 1 2 0.0032 0.21 3.6 0.0 5 25 246 266 243 269 0.84 # 28831 # 30348 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.507 1_45 - 506 NTPase_1 PF03266.10 168 0.00026 13.0 0.0 2 2 0.00039 0.026 6.5 0.0 108 145 316 353 314 357 0.91 # 28831 # 30348 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.507 1_52 - 340 FtsK_SpoIIIE PF01580.13 205 4.8e-05 15.2 0.0 1 1 2.6e-06 8.6e-05 14.4 0.0 35 57 168 190 140 193 0.77 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_58 - 791 FtsK_SpoIIIE PF01580.13 205 0.00023 13.0 0.1 1 1 1.2e-05 0.00041 12.2 0.1 36 54 421 439 408 442 0.83 # 42139 # 44511 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 ABC_tran PF00005.22 137 4e-06 19.5 0.0 1 2 0.051 3.4 0.3 0.0 36 116 32 148 25 154 0.54 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 ABC_tran PF00005.22 137 4e-06 19.5 0.0 2 2 4e-07 2.6e-05 16.9 0.0 14 62 174 220 167 306 0.78 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 AAA_19 PF13245.1 76 1e-06 20.8 0.0 1 1 1.2e-07 2.6e-06 19.5 0.0 6 35 167 195 163 215 0.82 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_41 - 313 AAA_19 PF13245.1 76 0.00019 13.5 0.2 1 1 2.3e-05 0.00052 12.1 0.2 7 37 115 144 109 225 0.83 # 25991 # 26929 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.482 1_45 - 506 AAA_19 PF13245.1 76 0.00026 13.1 0.0 1 1 3.7e-05 0.0008 11.5 0.0 10 47 240 275 232 278 0.78 # 28831 # 30348 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.507 1_58 - 791 AAA_10 PF12846.2 304 7e-25 80.3 0.0 1 1 5.2e-26 1.1e-24 79.6 0.0 2 302 424 712 423 714 0.83 # 42139 # 44511 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_41 - 313 AAA_10 PF12846.2 304 0.00016 13.4 0.0 1 2 3.8e-05 0.00083 11.1 0.0 3 37 119 155 117 180 0.82 # 25991 # 26929 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.482 1_41 - 313 AAA_10 PF12846.2 304 0.00016 13.4 0.0 2 2 0.096 2.1 -0.1 0.0 193 236 207 248 193 262 0.71 # 25991 # 26929 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.482 1_52 - 340 AAA_10 PF12846.2 304 0.0006 11.6 0.0 1 1 4.5e-05 0.00099 10.9 0.0 3 22 173 192 171 208 0.88 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 ResIII PF04851.10 184 0.00017 13.8 0.0 1 1 4.3e-06 0.00028 13.0 0.0 11 44 159 190 131 201 0.75 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_51 - 599 TrwB_AAD_bind PF10412.4 386 5.6e-22 70.1 0.0 1 1 3.7e-23 1.2e-21 69.0 0.0 73 368 220 544 217 551 0.78 # 35050 # 36846 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.415 1_52 - 340 TrwB_AAD_bind PF10412.4 386 3.2e-05 14.9 0.0 1 1 2.1e-06 7.1e-05 13.8 0.0 6 36 162 192 157 207 0.81 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 Sigma54_activ_2 PF14532.1 138 0.00042 12.7 0.0 1 1 1.3e-05 0.00089 11.7 0.0 10 42 160 192 156 213 0.85 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_51 - 599 T4SS-DNA_transf PF02534.9 469 7e-93 303.9 0.0 1 1 1.5e-94 1e-92 303.4 0.0 24 456 127 582 100 590 0.86 # 35050 # 36846 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.415 1_14 - 223 GTP_EFTU PF00009.22 188 2.3e-06 19.5 0.1 1 1 5.6e-08 3.7e-06 18.8 0.1 15 111 15 121 11 220 0.73 # 10160 # 10828 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_41 - 313 AAA_25 PF13481.1 194 0.00032 12.4 0.0 1 1 7e-06 0.00046 11.9 0.0 33 67 117 156 92 245 0.64 # 25991 # 26929 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.482 1_52 - 340 AAA_28 PF13521.1 163 2.8e-05 16.4 0.0 1 1 7.6e-07 5e-05 15.6 0.0 2 32 174 209 173 236 0.84 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_52 - 340 AAA_5 PF07728.9 139 0.00043 12.4 0.0 1 1 1.1e-05 0.0007 11.7 0.0 1 29 173 203 173 251 0.87 # 36872 # 37891 # -1 # ID=1_52;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.413 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d580a667-ed85-4f7d-b994-935c151689e1 # Target file: checkm_output/bins/pm45/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm45/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d580a667-ed85-4f7d-b994-935c151689e1 checkm_output/bins/pm45/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:06:07 2020 # [ok]