#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_13                 -            402 MipZ                 PF09140.6    261   8.6e-07   20.0   0.0   1   2    0.0027      0.12    3.1   0.0     3    50   111   163   109   193 0.73 # 9745 # 10950 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456
1_13                 -            402 MipZ                 PF09140.6    261   8.6e-07   20.0   0.0   2   2   8.7e-07     4e-05   14.6   0.0    87   136   233   282   220   296 0.87 # 9745 # 10950 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456
1_13                 -            402 CbiA                 PF01656.18   195     7e-19   59.8   0.0   1   1   2.8e-20   1.3e-18   58.9   0.0     1   142   111   292   111   327 0.76 # 9745 # 10950 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456
1_24                 -            129 Ribosomal_S20p       PF01649.13    84   0.00013   14.2   0.1   1   1   4.8e-06   0.00022   13.4   0.1     6    59    56   109    53   118 0.75 # 19464 # 19850 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.442
1_13                 -            402 AAA_31               PF13614.1    157   4.4e-05   15.3   0.0   1   1   5.5e-06   0.00025   12.8   0.0   108   147   235   273   230   279 0.86 # 9745 # 10950 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/3157535f-e585-468d-aa8d-cc191edab5c4
# Target file:     checkm_output/bins/pm427/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pm427/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3157535f-e585-468d-aa8d-cc191edab5c4 checkm_output/bins/pm427/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 17:05:53 2020
# [ok]