# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_18 - 263 MipZ PF09140.6 261 1e-10 31.5 0.0 1 2 1.4e-06 2.4e-05 13.9 0.0 2 39 11 48 10 60 0.92 # 16277 # 17065 # 1 # ID=1_18;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.431 1_18 - 263 MipZ PF09140.6 261 1e-10 31.5 0.0 2 2 4.1e-07 7.4e-06 15.6 0.0 61 127 95 162 86 165 0.82 # 16277 # 17065 # 1 # ID=1_18;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.431 1_18 - 263 VirC1 PF07015.6 231 0.00016 11.2 0.0 1 2 0.0036 0.065 2.7 0.0 2 37 10 45 9 55 0.79 # 16277 # 17065 # 1 # ID=1_18;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.431 1_18 - 263 VirC1 PF07015.6 231 0.00016 11.2 0.0 2 2 0.00025 0.0044 6.5 0.0 82 117 132 167 108 192 0.82 # 16277 # 17065 # 1 # ID=1_18;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.431 1_18 - 263 CbiA PF01656.18 195 7e-19 58.4 0.0 1 1 5e-20 9e-19 58.1 0.0 1 161 12 204 12 229 0.80 # 16277 # 17065 # 1 # ID=1_18;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.431 1_18 - 263 AAA_31 PF13614.1 157 1.4e-07 22.1 0.0 1 1 3.1e-08 5.5e-07 20.1 0.0 1 135 10 151 10 171 0.82 # 16277 # 17065 # 1 # ID=1_18;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.431 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4930db9c-6b9f-4545-922e-a92163761849 # Target file: checkm_output/bins/pm390/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm390/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4930db9c-6b9f-4545-922e-a92163761849 checkm_output/bins/pm390/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:05:29 2020 # [ok]