# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_29 - 372 ATP_bind_3 PF01171.15 182 0.00028 14.2 0.0 1 2 5.2e-05 0.0098 9.2 0.0 1 59 52 110 52 129 0.78 # 14396 # 15511 # 1 # ID=4_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 4_29 - 372 ATP_bind_3 PF01171.15 182 0.00028 14.2 0.0 2 2 0.005 0.94 2.7 0.0 134 161 232 260 207 262 0.72 # 14396 # 15511 # 1 # ID=4_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 1 5 0.019 3.5 1.5 8.8 39 98 89 152 77 158 0.72 # 12736 # 13776 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 2 5 0.00084 0.16 5.9 3.1 50 100 146 196 143 199 0.89 # 12736 # 13776 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 3 5 2.6e-06 0.00048 13.9 12.2 19 100 216 294 201 297 0.85 # 12736 # 13776 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 4 5 0.00031 0.057 7.3 2.1 62 105 284 327 282 330 0.90 # 12736 # 13776 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 5 5 0.0059 1.1 3.1 1.6 82 105 304 327 296 345 0.51 # 12736 # 13776 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 262 MipZ PF09140.6 261 3.4e-10 33.2 0.0 1 2 6.6e-10 1.2e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 10202 # 10987 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_14 - 262 MipZ PF09140.6 261 3.4e-10 33.2 0.0 2 2 0.00031 0.058 6.2 0.0 89 122 117 150 89 166 0.74 # 10202 # 10987 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 9_1 - 442 3HCDH_N PF02737.13 180 5.6e-11 36.2 0.4 1 2 3.1e-06 0.00058 13.3 0.1 2 34 6 38 5 72 0.91 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 3HCDH_N PF02737.13 180 5.6e-11 36.2 0.4 2 2 1.2e-08 2.3e-06 21.1 0.0 2 75 161 233 160 249 0.79 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 GIDA PF01134.17 392 6e-08 25.6 1.4 1 3 7.7e-08 1.4e-05 17.8 1.0 2 46 6 54 5 69 0.89 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 GIDA PF01134.17 392 6e-08 25.6 1.4 2 3 0.025 4.6 -0.3 0.0 103 150 84 129 65 138 0.82 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 GIDA PF01134.17 392 6e-08 25.6 1.4 3 3 0.0011 0.21 4.1 0.0 4 28 163 187 160 212 0.82 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_69 - 176 SSB PF00436.20 104 2.3e-41 133.7 0.3 1 1 1.5e-43 2.9e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 60958 # 61485 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_18 - 504 UvrD_C_2 PF13538.1 104 1.4e-10 35.0 0.0 1 1 3.5e-12 6.5e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 9_1 - 442 Pyr_redox_2 PF07992.9 201 9.9e-37 120.5 6.0 1 1 4.6e-37 8.6e-35 114.2 6.0 2 199 6 296 5 298 0.94 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_33 - 622 DUF87 PF01935.12 229 1.6e-08 28.4 0.0 1 1 4.3e-10 4e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 816 DUF87 PF01935.12 229 6.9e-08 26.3 0.2 1 1 1.5e-09 1.4e-07 25.3 0.2 24 154 452 587 432 660 0.71 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_18 - 504 AAA_22 PF13401.1 131 6.1e-05 17.0 0.0 1 2 8e-05 0.005 10.8 0.0 8 68 23 92 17 122 0.63 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_18 - 504 AAA_22 PF13401.1 131 6.1e-05 17.0 0.0 2 2 0.015 0.93 3.4 0.0 82 124 189 225 164 229 0.77 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_67 - 323 AAA_22 PF13401.1 131 0.00023 15.1 0.0 1 1 7.8e-06 0.00048 14.1 0.0 5 54 62 103 56 164 0.76 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_33 - 622 AAA_22 PF13401.1 131 0.00024 15.1 0.0 1 1 1.2e-05 0.00077 13.4 0.0 3 68 171 231 166 287 0.83 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_25 - 476 DNA_methylase PF00145.12 335 1.1e-10 34.9 0.0 1 2 2.1e-11 3.8e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 16372 # 17799 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_25 - 476 DNA_methylase PF00145.12 335 1.1e-10 34.9 0.0 2 2 0.0031 0.57 2.9 0.0 290 330 407 448 341 452 0.73 # 16372 # 17799 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_28 - 93 Ribosomal_L2_C PF03947.13 130 0.00093 12.8 0.0 1 1 6.3e-06 0.0012 12.5 0.0 74 111 44 80 24 82 0.86 # 19361 # 19639 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 1_67 - 323 AAA_3 PF07726.6 131 0.00013 15.4 0.0 1 1 1.1e-06 0.00021 14.7 0.0 3 114 65 188 63 212 0.80 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 9_1 - 442 NAD_binding_7 PF13241.1 103 9.6e-06 19.6 0.2 1 2 9.2e-05 0.017 9.2 0.0 8 40 4 36 1 94 0.71 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 NAD_binding_7 PF13241.1 103 9.6e-06 19.6 0.2 2 2 0.00026 0.049 7.7 0.0 11 53 162 231 157 269 0.69 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_67 - 323 AAA_17 PF13207.1 121 4.8e-05 18.0 0.0 1 1 5.5e-07 0.0001 16.9 0.0 3 27 65 89 64 166 0.90 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_33 - 622 MobB PF03205.9 140 0.00097 12.6 0.0 1 1 1.7e-05 0.0032 10.9 0.0 4 34 176 206 175 214 0.90 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_14 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 1 2 3e-07 5.6e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 10202 # 10987 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_14 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 2 2 0.029 5.4 -0.3 0.0 124 136 124 136 106 143 0.79 # 10202 # 10987 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_18 - 504 PhoH PF02562.11 205 4.8e-06 19.7 0.2 1 2 0.0013 0.24 4.3 0.0 22 45 22 45 4 61 0.78 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_18 - 504 PhoH PF02562.11 205 4.8e-06 19.7 0.2 2 2 7.5e-06 0.0014 11.7 0.0 122 168 196 240 193 255 0.83 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_67 - 323 T2SE PF00437.15 272 6.5e-05 15.7 0.0 1 1 1.6e-06 0.00015 14.5 0.0 105 148 40 81 9 100 0.77 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_33 - 622 T2SE PF00437.15 272 0.00034 13.3 0.0 1 1 5.9e-06 0.00054 12.6 0.0 116 162 163 206 124 227 0.78 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 9_1 - 442 NAD_binding_8 PF13450.1 68 4.5e-06 20.5 0.7 1 2 6.2e-06 0.0011 12.7 0.1 1 33 8 41 8 71 0.89 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 NAD_binding_8 PF13450.1 68 4.5e-06 20.5 0.7 2 2 0.0012 0.22 5.4 0.1 1 29 163 191 163 193 0.94 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 F420_oxidored PF03807.12 96 0.00088 13.5 6.8 1 2 5e-05 0.0094 10.2 0.2 3 31 7 32 5 65 0.84 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 F420_oxidored PF03807.12 96 0.00088 13.5 6.8 2 2 0.0017 0.31 5.3 0.5 2 33 161 189 160 249 0.90 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 FAD_binding_3 PF01494.14 356 2.3e-05 17.3 0.4 1 2 2e-06 0.00037 13.3 0.1 2 35 4 37 3 42 0.91 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 FAD_binding_3 PF01494.14 356 2.3e-05 17.3 0.4 2 2 0.006 1.1 1.9 0.0 6 37 163 194 160 271 0.71 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 4_29 - 372 TIGR02432 TIGR02432 189 7.5e-05 16.2 0.1 1 2 1.1e-05 0.002 11.5 0.0 1 58 52 109 52 119 0.85 # 14396 # 15511 # 1 # ID=4_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 4_29 - 372 TIGR02432 TIGR02432 189 7.5e-05 16.2 0.1 2 2 0.0084 1.6 2.1 0.0 140 165 235 260 207 262 0.76 # 14396 # 15511 # 1 # ID=4_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_67 - 323 Arch_ATPase PF01637.13 234 7.8e-05 16.2 0.0 1 1 7e-07 0.00013 15.5 0.0 4 44 45 85 43 94 0.91 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_67 - 323 AAA_16 PF13191.1 185 4.5e-05 17.3 0.8 1 1 2.2e-06 0.00014 15.7 0.0 7 48 47 85 42 102 0.79 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_54 - 816 AAA_16 PF13191.1 185 5.1e-05 17.1 0.2 1 1 4.8e-06 0.0003 14.6 0.2 20 63 447 490 439 659 0.64 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_27 - 206 AAA_16 PF13191.1 185 7.8e-05 16.5 0.1 1 1 1.9e-06 0.00012 15.9 0.1 27 68 11 54 3 168 0.79 # 18511 # 19128 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.519 3_9 - 462 AAA_23 PF13476.1 202 0.013 9.6 4.6 1 2 0.00034 0.063 7.3 1.3 106 198 122 233 62 244 0.68 # 8905 # 10290 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 3_9 - 462 AAA_23 PF13476.1 202 0.013 9.6 4.6 2 2 0.0055 1 3.4 0.1 144 191 349 403 303 437 0.61 # 8905 # 10290 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 2_16 - 347 AAA_13 PF13166.1 712 0.012 7.7 36.6 1 2 0.0019 0.35 2.9 28.3 283 457 85 259 71 272 0.58 # 12736 # 13776 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 AAA_13 PF13166.1 712 0.012 7.7 36.6 2 2 2.3e-05 0.0044 9.2 23.2 287 474 160 339 154 345 0.78 # 12736 # 13776 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 262 CbiA PF01656.18 195 2.2e-30 99.3 0.0 1 1 4.5e-32 2.8e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 10202 # 10987 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 8_3 - 248 CbiA PF01656.18 195 3.3e-20 66.1 0.0 1 1 6.1e-22 3.8e-20 65.9 0.0 65 194 69 198 15 199 0.78 # 2367 # 3110 # -1 # ID=8_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.485 1_54 - 816 CbiA PF01656.18 195 0.00073 12.7 0.0 1 1 2.5e-05 0.0016 11.7 0.0 3 49 455 517 454 593 0.60 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_18 - 504 AAA_14 PF13173.1 128 3e-05 17.7 1.3 1 2 2.5e-05 0.0047 10.6 0.1 11 46 28 62 18 156 0.76 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_18 - 504 AAA_14 PF13173.1 128 3e-05 17.7 1.3 2 2 0.0011 0.21 5.3 0.0 51 99 176 227 127 241 0.73 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 9_1 - 442 HI0933_like PF03486.9 409 4.7e-10 32.2 0.1 1 2 5.4e-06 0.001 11.4 0.0 2 35 5 38 4 82 0.90 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 HI0933_like PF03486.9 409 4.7e-10 32.2 0.1 2 2 3.2e-08 5.9e-06 18.7 0.0 81 164 172 252 167 271 0.91 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_67 - 323 AAA_29 PF13555.1 62 0.0022 11.3 1.0 1 1 2.7e-05 0.005 10.2 0.3 21 38 59 76 54 79 0.86 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 9_1 - 442 FAD_binding_2 PF00890.19 417 2.1e-05 17.3 3.0 1 2 2e-07 3.7e-05 16.4 0.2 2 41 6 45 5 69 0.89 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 FAD_binding_2 PF00890.19 417 2.1e-05 17.3 3.0 2 2 0.013 2.4 0.6 0.2 370 407 260 298 218 302 0.78 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_67 - 323 AAA PF00004.24 132 0.00063 13.7 0.1 1 1 7.4e-06 0.0014 12.6 0.1 2 33 65 96 64 149 0.83 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_18 - 504 UvrD_C PF13361.1 351 1.7e-10 34.6 0.0 1 1 1.7e-12 3.2e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 9_1 - 442 Thi4 PF01946.12 230 2.3e-06 20.6 0.2 1 2 1.5e-07 2.8e-05 17.1 0.0 20 57 6 43 1 73 0.84 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 Thi4 PF01946.12 230 2.3e-06 20.6 0.2 2 2 0.014 2.6 0.8 0.0 22 48 163 189 154 193 0.91 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 4_29 - 372 PAPS_reduct PF01507.14 174 6.5e-12 39.4 0.4 1 2 0.014 2.6 1.6 0.0 2 17 53 68 52 91 0.76 # 14396 # 15511 # 1 # ID=4_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 4_29 - 372 PAPS_reduct PF01507.14 174 6.5e-12 39.4 0.4 2 2 4.4e-13 8.2e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 14396 # 15511 # 1 # ID=4_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 9_1 - 442 Pyr_redox_3 PF13738.1 203 2.3e-10 34.6 0.4 1 2 7.2e-05 0.013 9.3 0.1 1 56 7 64 7 194 0.52 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 Pyr_redox_3 PF13738.1 203 2.3e-10 34.6 0.4 2 2 2.5e-07 4.6e-05 17.3 0.0 82 155 199 267 193 287 0.86 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_17 - 212 N6_Mtase PF02384.11 311 6.9e-07 22.3 0.0 1 1 5.9e-09 1.1e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 12546 # 13181 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_33 - 622 TraG-D_C PF12696.2 128 5.3e-15 49.2 0.0 1 1 1e-16 9.5e-15 48.4 0.0 1 124 471 595 471 599 0.83 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 816 TraG-D_C PF12696.2 128 1.7e-06 21.8 0.0 1 1 4e-08 3.7e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 9_1 - 442 NAD_binding_2 PF03446.10 163 0.00093 12.8 0.1 1 2 2.7e-05 0.0051 10.4 0.0 6 36 8 38 3 97 0.76 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 NAD_binding_2 PF03446.10 163 0.00093 12.8 0.1 2 2 0.055 10 -0.3 0.0 4 31 161 188 159 251 0.87 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_14 - 262 AAA_31 PF13614.1 157 2.4e-10 34.3 0.0 1 1 2.6e-12 4.9e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 10202 # 10987 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_69 - 176 AAA_33 PF13671.1 143 0.0011 12.7 0.0 1 1 8.6e-06 0.0016 12.1 0.0 26 102 33 104 23 109 0.75 # 60958 # 61485 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 9_1 - 442 NAD_Gly3P_dh_N PF01210.18 157 2.2e-05 18.0 0.1 1 2 4.7e-05 0.0087 9.6 0.1 3 73 7 74 5 93 0.63 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 NAD_Gly3P_dh_N PF01210.18 157 2.2e-05 18.0 0.1 2 2 0.00069 0.13 5.8 0.0 3 28 162 187 160 237 0.87 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 2-Hacid_dh_C PF02826.14 178 4e-07 23.1 1.0 1 2 7.3e-05 0.014 8.4 0.0 38 69 5 36 1 88 0.85 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 2-Hacid_dh_C PF02826.14 178 4e-07 23.1 1.0 2 2 3.1e-06 0.00058 12.8 0.2 38 67 160 189 151 252 0.88 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 XdhC_C PF13478.1 136 1.9e-06 22.0 0.1 1 2 3.5e-05 0.0065 10.6 0.0 2 47 7 53 6 81 0.75 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 XdhC_C PF13478.1 136 1.9e-06 22.0 0.1 2 2 0.0001 0.019 9.1 0.0 1 68 161 241 161 259 0.59 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 2_18 - 504 AAA_30 PF13604.1 196 9.1e-08 25.7 0.1 1 2 9.2e-07 0.00017 15.0 0.0 19 80 20 81 11 109 0.77 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_18 - 504 AAA_30 PF13604.1 196 9.1e-08 25.7 0.1 2 2 0.00017 0.032 7.5 0.0 115 133 211 229 174 278 0.75 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 9_1 - 442 ApbA PF02558.11 151 8.5e-05 15.8 1.5 1 2 2.8e-06 0.00053 13.2 0.0 2 31 7 36 6 81 0.86 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 ApbA PF02558.11 151 8.5e-05 15.8 1.5 2 2 0.022 4.1 0.6 0.1 2 27 162 187 161 194 0.90 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_33 - 622 FtsK_SpoIIIE PF01580.13 205 1.6e-07 24.8 0.0 1 2 3.8e-08 2.4e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 622 FtsK_SpoIIIE PF01580.13 205 1.6e-07 24.8 0.0 2 2 0.042 2.6 1.2 0.0 176 204 481 509 472 510 0.86 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 816 FtsK_SpoIIIE PF01580.13 205 1.4e-06 21.7 0.1 1 1 6.7e-08 4.1e-06 20.1 0.1 33 84 446 495 401 698 0.67 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_27 - 206 FtsK_SpoIIIE PF01580.13 205 0.0013 11.9 0.2 1 1 7.1e-05 0.0044 10.3 0.0 34 53 4 23 1 28 0.83 # 18511 # 19128 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.519 9_1 - 442 Lycopene_cycl PF05834.7 374 6.5e-05 15.7 1.1 1 2 1.1e-05 0.0021 10.7 0.1 3 36 7 38 5 43 0.90 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 Lycopene_cycl PF05834.7 374 6.5e-05 15.7 1.1 2 2 0.0018 0.33 3.5 0.1 96 142 212 257 197 271 0.74 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_67 - 323 ABC_tran PF00005.22 137 0.0013 12.8 0.0 1 1 1.3e-05 0.0025 11.9 0.0 11 46 61 96 55 117 0.85 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 9_1 - 442 UDPG_MGDP_dh_N PF03721.9 185 7.7e-06 19.2 1.4 1 2 0.00081 0.15 5.2 0.1 4 32 7 35 5 42 0.91 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 UDPG_MGDP_dh_N PF03721.9 185 7.7e-06 19.2 1.4 2 2 4.6e-06 0.00086 12.5 0.1 4 30 162 188 160 193 0.91 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 2_18 - 504 AAA_19 PF13245.1 76 2.9e-09 30.4 0.0 1 1 8.4e-11 7.8e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_67 - 323 AAA_19 PF13245.1 76 0.00028 14.4 0.1 1 1 7e-06 0.00065 13.3 0.1 10 35 61 86 51 112 0.76 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_54 - 816 AAA_10 PF12846.2 304 5.3e-59 193.9 0.2 1 1 9.5e-61 8.8e-59 193.1 0.2 1 296 451 729 451 738 0.93 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_33 - 622 AAA_10 PF12846.2 304 2e-18 60.6 0.2 1 1 5.7e-20 5.3e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 9_1 - 442 DAO PF01266.19 358 8.4e-13 41.6 1.3 1 3 5.6e-08 1e-05 18.3 0.0 2 41 6 45 5 110 0.82 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 DAO PF01266.19 358 8.4e-13 41.6 1.3 2 3 0.0004 0.074 5.6 0.1 4 31 163 190 160 193 0.92 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 DAO PF01266.19 358 8.4e-13 41.6 1.3 3 3 3.8e-07 7.1e-05 15.6 0.1 148 233 200 284 197 370 0.70 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 2_18 - 504 ResIII PF04851.10 184 2e-06 21.5 0.0 1 1 5.5e-08 5.1e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_33 - 622 ResIII PF04851.10 184 0.0002 15.0 0.0 1 1 4.2e-06 0.0004 14.0 0.0 23 57 170 206 129 214 0.74 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_16 - 347 DUF3584 PF12128.3 1201 0.031 5.3 51.1 1 2 0.0051 0.95 0.4 32.3 377 534 86 242 42 246 0.65 # 12736 # 13776 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 DUF3584 PF12128.3 1201 0.031 5.3 51.1 2 2 2e-05 0.0037 8.3 20.6 613 709 225 327 220 345 0.80 # 12736 # 13776 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_18 - 504 Viral_helicase1 PF01443.13 234 1.7e-10 34.6 0.0 1 3 1.4e-05 0.0027 11.0 0.0 2 49 23 73 22 87 0.67 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_18 - 504 Viral_helicase1 PF01443.13 234 1.7e-10 34.6 0.0 2 3 1.8e-05 0.0034 10.7 0.0 56 105 188 234 146 256 0.78 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_18 - 504 Viral_helicase1 PF01443.13 234 1.7e-10 34.6 0.0 3 3 5.2e-05 0.0097 9.2 0.0 176 227 404 462 344 467 0.75 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_33 - 622 DEAD PF00270.24 169 4.3e-05 16.8 0.0 1 1 4.4e-07 8.1e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 9_1 - 442 Pyr_redox PF00070.22 80 4.6e-26 84.9 0.8 1 2 0.00033 0.061 7.6 0.2 2 33 6 37 5 43 0.92 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 Pyr_redox PF00070.22 80 4.6e-26 84.9 0.8 2 2 2.4e-25 4.5e-23 75.3 0.0 1 78 160 235 160 238 0.95 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 1_33 - 622 DUF853 PF05872.7 504 1.6e-06 20.5 0.0 1 1 1.4e-08 2.5e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 622 TrwB_AAD_bind PF10412.4 386 3.7e-19 62.3 0.0 1 2 8.9e-13 8.2e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 622 TrwB_AAD_bind PF10412.4 386 3.7e-19 62.3 0.0 2 2 6.9e-10 6.4e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 816 TrwB_AAD_bind PF10412.4 386 4.2e-08 25.9 0.0 1 2 1.5e-05 0.0014 11.1 0.0 6 72 442 517 438 520 0.85 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_54 - 816 TrwB_AAD_bind PF10412.4 386 4.2e-08 25.9 0.0 2 2 5.6e-06 0.00052 12.4 0.1 232 301 643 712 613 731 0.66 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_18 - 504 AAA_11 PF13086.1 236 5.4e-07 23.2 0.1 1 1 1.9e-08 3.5e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_54 - 816 Guanylate_kin PF00625.16 183 0.00027 14.2 0.1 1 3 0.0039 0.72 3.0 0.0 3 26 452 475 450 503 0.86 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_54 - 816 Guanylate_kin PF00625.16 183 0.00027 14.2 0.1 2 3 0.0094 1.8 1.8 0.1 75 115 596 637 580 703 0.83 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_54 - 816 Guanylate_kin PF00625.16 183 0.00027 14.2 0.1 3 3 0.001 0.19 4.9 0.0 75 131 714 770 697 777 0.87 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 7_4 - 127 Kinesin-relat_1 PF12711.2 86 0.0011 13.1 6.7 1 2 0.0003 0.056 7.7 3.8 3 45 7 49 6 52 0.91 # 2523 # 2903 # -1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.580 7_4 - 127 Kinesin-relat_1 PF12711.2 86 0.0011 13.1 6.7 2 2 0.00029 0.055 7.7 0.1 4 42 46 86 45 92 0.63 # 2523 # 2903 # -1 # ID=7_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.580 1_33 - 622 T4SS-DNA_transf PF02534.9 469 4.5e-05 15.9 0.0 1 2 5.2e-07 9.6e-05 14.8 0.0 37 115 168 249 125 365 0.73 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 622 T4SS-DNA_transf PF02534.9 469 4.5e-05 15.9 0.0 2 2 0.097 18 -2.6 0.0 328 389 494 555 474 572 0.74 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 622 ArgK PF03308.11 267 0.0002 13.9 0.0 1 1 1.8e-06 0.00034 13.2 0.0 12 68 158 209 153 214 0.88 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 4_29 - 372 tRNA_Me_trans PF03054.11 356 7e-05 15.2 0.0 1 2 1.1e-06 0.00021 13.6 0.0 2 71 52 122 51 144 0.74 # 14396 # 15511 # 1 # ID=4_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 4_29 - 372 tRNA_Me_trans PF03054.11 356 7e-05 15.2 0.0 2 2 0.042 7.7 -1.4 0.0 193 224 274 305 236 311 0.83 # 14396 # 15511 # 1 # ID=4_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 9_1 - 442 TrkA_N PF02254.13 116 1.1e-05 19.2 0.7 1 2 3.1e-06 0.00057 13.7 0.0 2 31 7 36 6 40 0.91 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 9_1 - 442 TrkA_N PF02254.13 116 1.1e-05 19.2 0.7 2 2 0.011 2 2.3 0.0 3 31 163 191 162 227 0.82 # 182 # 1507 # 1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.455 2_18 - 504 UvrD-helicase PF00580.16 315 1e-16 54.9 3.9 1 2 2.9e-06 0.00054 13.1 0.1 2 38 8 44 7 64 0.81 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_18 - 504 UvrD-helicase PF00580.16 315 1e-16 54.9 3.9 2 2 3.4e-15 6.3e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 14063 # 15574 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_54 - 816 AAA_25 PF13481.1 194 0.00064 12.9 0.0 1 1 2.5e-05 0.0016 11.6 0.0 36 86 454 494 447 532 0.82 # 46904 # 49351 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_14 - 262 AAA_25 PF13481.1 194 0.00073 12.7 0.0 1 1 1.8e-05 0.0011 12.1 0.0 42 91 12 51 11 134 0.78 # 10202 # 10987 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_33 - 622 AAA_25 PF13481.1 194 0.00073 12.7 0.0 1 1 3.7e-05 0.0023 11.1 0.0 20 137 159 265 145 272 0.78 # 26394 # 28259 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_67 - 323 AAA_5 PF07728.9 139 1.8e-18 60.4 0.0 1 1 1.6e-20 2.9e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 59007 # 59975 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/fb6b0b24-071d-4a6e-8ada-8bcf65e359b9 # Target file: checkm_output/bins/pm362/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm362/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/fb6b0b24-071d-4a6e-8ada-8bcf65e359b9 checkm_output/bins/pm362/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:05:14 2020 # [ok]