# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_9 - 195 AAA_13 PF13166.1 712 0.00011 10.5 2.7 1 1 1.2e-05 0.00013 10.2 2.7 93 377 17 100 1 120 0.30 # 6363 # 6947 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_9 - 195 DUF3584 PF12128.3 1201 4.9e-05 10.5 8.8 1 1 6e-06 6.6e-05 10.1 8.8 601 687 14 102 4 116 0.48 # 6363 # 6947 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/6fe7cde3-62ce-443e-9ba8-f104ae0fe867 # Target file: checkm_output/bins/pm310/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm310/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6fe7cde3-62ce-443e-9ba8-f104ae0fe867 checkm_output/bins/pm310/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:04:38 2020 # [ok]