# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_34 - 231 OB_NTP_bind PF07717.11 114 0.00059 12.7 0.0 1 1 7.8e-06 0.00085 12.2 0.0 24 83 28 97 16 158 0.79 # 30980 # 31672 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 228 UPF0020 PF01170.13 180 1.6e-05 17.6 0.0 1 2 0.00028 0.03 6.9 0.0 103 121 17 35 4 89 0.71 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_85 - 228 UPF0020 PF01170.13 180 1.6e-05 17.6 0.0 2 2 7.3e-05 0.0079 8.8 0.0 28 54 163 189 160 221 0.66 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_60 - 730 Rad17 PF03215.10 519 3.5e-05 15.6 0.0 1 1 5.7e-07 6.2e-05 14.8 0.0 35 72 515 552 505 604 0.80 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_93 - 215 MipZ PF09140.6 261 2.6e-08 26.2 2.3 1 2 0.0008 0.088 4.8 0.5 7 25 8 26 2 38 0.71 # 83949 # 84593 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_93 - 215 MipZ PF09140.6 261 2.6e-08 26.2 2.3 2 2 9e-09 9.8e-07 21.1 0.1 70 133 45 108 25 125 0.84 # 83949 # 84593 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_77 - 176 SSB PF00436.20 104 7.1e-41 131.4 0.4 1 1 8.6e-43 9.4e-41 131.0 0.4 1 101 6 109 6 112 0.96 # 73124 # 73651 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.593 1_29 - 383 DUF87 PF01935.12 229 0.001 11.9 0.0 1 1 1.7e-05 0.0018 11.1 0.0 28 56 162 191 161 192 0.83 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_60 - 730 AAA_22 PF13401.1 131 5.2e-06 19.7 0.1 1 2 3.4e-05 0.0012 12.0 0.1 5 24 526 545 524 568 0.90 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_60 - 730 AAA_22 PF13401.1 131 5.2e-06 19.7 0.1 2 2 0.0058 0.21 4.8 0.0 56 122 626 688 621 693 0.67 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_29 - 383 AAA_22 PF13401.1 131 1.3e-05 18.4 0.0 1 1 9.1e-07 3.3e-05 17.1 0.0 4 26 157 179 152 233 0.73 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 518 AAA_22 PF13401.1 131 0.00029 14.0 0.0 1 1 1.9e-05 0.00069 12.8 0.0 6 28 227 249 222 330 0.77 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_29 - 383 ATP_bind_1 PF03029.12 238 2.1e-05 17.2 0.0 1 1 3e-07 3.2e-05 16.5 0.0 1 30 162 191 162 198 0.86 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_85 - 228 N6_N4_Mtase PF01555.13 231 7.6e-36 116.7 0.0 1 2 7.6e-15 8.2e-13 41.3 0.0 1 114 21 124 21 137 0.89 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_85 - 228 N6_N4_Mtase PF01555.13 231 7.6e-36 116.7 0.0 2 2 9.2e-25 1e-22 73.8 0.0 169 228 141 200 126 203 0.90 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_29 - 383 AAA_17 PF13207.1 121 1.3e-05 19.1 0.1 1 1 4.4e-06 0.00016 15.5 0.0 3 55 161 216 161 254 0.78 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 518 AAA_17 PF13207.1 121 2.6e-05 18.1 0.3 1 1 3.1e-06 0.00011 16.0 0.0 1 24 227 255 227 347 0.72 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_60 - 730 AAA_17 PF13207.1 121 4.8e-05 17.2 0.0 1 1 4.1e-06 0.00015 15.6 0.0 1 31 527 567 527 615 0.72 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_60 - 730 AAA_21 PF13304.1 303 3.2e-08 26.8 0.7 1 2 5.2e-06 0.00056 12.9 0.1 2 62 528 594 527 603 0.69 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_60 - 730 AAA_21 PF13304.1 303 3.2e-08 26.8 0.7 2 2 1.4e-05 0.0015 11.5 0.0 237 284 636 680 629 694 0.88 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_29 - 383 Miro PF08477.8 119 0.0012 12.4 0.0 1 1 4.3e-05 0.0047 10.5 0.0 3 25 161 183 161 208 0.77 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_29 - 383 MobB PF03205.9 140 2.3e-05 17.2 0.0 1 2 0.017 1.8 1.3 0.0 14 60 61 108 61 127 0.88 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_29 - 383 MobB PF03205.9 140 2.3e-05 17.2 0.0 2 2 3.4e-06 0.00037 13.2 0.0 5 29 162 185 160 195 0.83 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 518 T2SE PF00437.15 272 3e-41 134.1 0.0 1 1 9.6e-43 5.2e-41 133.3 0.0 10 271 97 373 90 374 0.85 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_29 - 383 T2SE PF00437.15 272 4.5e-35 113.8 0.0 1 1 1.2e-36 6.8e-35 113.2 0.0 120 269 149 306 126 309 0.87 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 518 G-alpha PF00503.15 389 0.00069 11.3 0.0 1 2 0.054 5.9 -1.6 0.0 234 272 70 113 29 117 0.80 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 518 G-alpha PF00503.15 389 0.00069 11.3 0.0 2 2 1.9e-05 0.0021 9.8 0.0 58 87 225 254 214 322 0.84 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_60 - 730 SMC_N PF02463.14 220 1.1e-08 27.6 0.1 1 2 0.00033 0.036 6.3 0.0 19 44 520 545 511 558 0.81 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_60 - 730 SMC_N PF02463.14 220 1.1e-08 27.6 0.1 2 2 4.4e-08 4.7e-06 19.0 0.0 137 209 636 702 567 709 0.90 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_93 - 215 VirC1 PF07015.6 231 0.00044 12.4 0.0 1 2 0.00073 0.08 5.0 0.0 3 29 3 29 1 36 0.81 # 83949 # 84593 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_93 - 215 VirC1 PF07015.6 231 0.00044 12.4 0.0 2 2 0.00052 0.056 5.5 0.0 87 190 77 181 59 194 0.70 # 83949 # 84593 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_60 - 730 AAA_16 PF13191.1 185 5e-05 16.3 1.0 1 1 6.3e-06 0.00023 14.2 1.0 24 51 525 552 517 688 0.68 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_14 - 518 AAA_16 PF13191.1 185 0.00011 15.3 0.0 1 1 9.6e-06 0.00035 13.6 0.0 8 51 213 252 212 301 0.78 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_29 - 383 AAA_16 PF13191.1 185 0.00067 12.7 0.0 1 1 4.4e-05 0.0016 11.5 0.0 28 56 161 192 149 283 0.77 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 518 AAA_23 PF13476.1 202 0.00015 15.2 0.2 1 1 1.5e-05 0.00053 13.4 0.0 20 38 226 244 208 249 0.84 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_29 - 383 AAA_23 PF13476.1 202 0.00024 14.5 0.0 1 1 1.1e-05 0.0004 13.7 0.0 19 40 157 178 142 205 0.86 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_60 - 730 AAA_23 PF13476.1 202 0.00056 13.3 0.0 1 1 2.5e-05 0.00092 12.6 0.0 20 53 526 559 502 613 0.79 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_29 - 383 AAA_18 PF13238.1 129 0.00026 14.3 0.0 1 1 9.3e-06 0.00051 13.4 0.0 2 19 161 182 161 235 0.71 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 518 AAA_18 PF13238.1 129 0.00042 13.7 0.0 1 1 2.1e-05 0.0012 12.2 0.0 1 18 228 245 228 316 0.86 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_93 - 215 CbiA PF01656.18 195 1.3e-09 30.7 0.1 1 1 1.8e-11 1.9e-09 30.2 0.1 1 145 4 124 4 173 0.79 # 83949 # 84593 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_60 - 730 AAA_14 PF13173.1 128 0.00032 13.6 0.0 1 1 1.9e-05 0.001 12.0 0.0 3 76 526 605 524 621 0.59 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_14 - 518 AAA_14 PF13173.1 128 0.00099 12.1 0.0 1 1 7.4e-05 0.004 10.1 0.0 5 30 228 254 225 286 0.80 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_60 - 730 AAA_29 PF13555.1 62 2.5e-05 16.8 0.1 1 1 2e-06 7.2e-05 15.4 0.1 23 49 525 551 515 559 0.75 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_29 - 383 AAA_29 PF13555.1 62 3e-05 16.6 0.0 1 1 2.4e-06 8.8e-05 15.1 0.0 26 43 160 177 151 189 0.85 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 518 AAA_29 PF13555.1 62 3.1e-05 16.5 0.0 1 1 1.7e-06 6.2e-05 15.6 0.0 21 40 224 242 217 254 0.83 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 518 AAA PF00004.24 132 0.00028 14.2 0.0 1 3 0.045 4.9 0.4 0.0 38 57 81 100 26 114 0.78 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 518 AAA PF00004.24 132 0.00028 14.2 0.0 2 3 0.00033 0.036 7.3 0.0 1 21 228 248 228 278 0.83 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 518 AAA PF00004.24 132 0.00028 14.2 0.0 3 3 0.017 1.9 1.8 0.0 9 66 442 508 436 515 0.64 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_60 - 730 DUF258 PF03193.11 161 5.9e-05 15.3 0.0 1 1 1e-06 0.00011 14.5 0.0 34 65 524 555 500 580 0.82 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_55 - 764 TraG-D_C PF12696.2 128 6.1e-07 22.4 0.1 1 1 1.2e-08 1.3e-06 21.3 0.1 1 88 437 524 437 553 0.83 # 52010 # 54301 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_60 - 730 NTPase_1 PF03266.10 168 0.00063 12.5 0.1 1 1 1.3e-05 0.0014 11.4 0.1 2 22 528 548 527 580 0.82 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_85 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 37.8 0.1 1 2 2.6e-07 2.8e-05 17.2 0.0 57 114 7 71 2 74 0.69 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_85 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 37.8 0.1 2 2 9.7e-08 1.1e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_14 - 518 AAA_30 PF13604.1 196 0.00035 13.2 0.0 1 1 5.8e-06 0.00063 12.4 0.0 4 44 211 251 209 276 0.84 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_26 - 195 DNA_pol3_delta PF06144.8 172 2.3e-06 20.3 0.0 1 1 3e-08 3.3e-06 19.7 0.0 35 99 92 152 74 179 0.80 # 22511 # 23095 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.403 1_29 - 383 FtsK_SpoIIIE PF01580.13 205 0.00095 11.7 0.0 1 1 1.6e-05 0.0017 10.8 0.0 41 60 160 179 130 190 0.87 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_60 - 730 ABC_tran PF00005.22 137 2.9e-32 104.9 0.0 1 1 1.5e-33 5.6e-32 103.9 0.0 1 137 515 664 515 664 0.86 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_14 - 518 ABC_tran PF00005.22 137 9.6e-05 15.7 0.1 1 1 8e-06 0.00029 14.2 0.0 12 37 226 251 217 288 0.81 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_29 - 383 ABC_tran PF00005.22 137 0.00022 14.6 0.0 1 1 1.1e-05 0.00041 13.7 0.0 16 34 162 180 152 224 0.85 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_85 - 228 Cons_hypoth95 PF03602.10 183 8.1e-06 18.3 0.0 1 2 0.00027 0.029 6.8 0.0 112 168 18 76 9 83 0.68 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_85 - 228 Cons_hypoth95 PF03602.10 183 8.1e-06 18.3 0.0 2 2 3.5e-05 0.0038 9.6 0.0 41 62 162 183 144 218 0.77 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_14 - 518 DAP3 PF10236.4 309 0.00069 11.6 0.0 1 1 1.2e-05 0.0013 10.7 0.0 21 42 223 244 215 253 0.86 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 518 AAA_19 PF13245.1 76 0.0001 15.1 0.0 1 1 2.6e-06 0.00029 13.7 0.0 10 46 226 259 218 268 0.79 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_42 - 1015 AAA_10 PF12846.2 304 1.2e-30 99.9 0.0 1 1 1.3e-31 2.9e-30 98.7 0.0 8 302 502 897 498 898 0.89 # 36770 # 39814 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.508 1_55 - 764 AAA_10 PF12846.2 304 3.4e-05 16.4 1.1 1 1 4.9e-06 0.00011 14.7 1.1 3 287 138 501 136 514 0.61 # 52010 # 54301 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_60 - 730 AAA_10 PF12846.2 304 5.2e-05 15.8 0.0 1 2 4.3e-05 0.00093 11.7 0.0 4 22 528 546 526 572 0.88 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_60 - 730 AAA_10 PF12846.2 304 5.2e-05 15.8 0.0 2 2 0.055 1.2 1.5 0.0 218 276 651 709 601 715 0.80 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_14 - 518 AAA_10 PF12846.2 304 0.00025 13.5 0.0 1 1 2.1e-05 0.00045 12.7 0.0 4 30 228 256 226 321 0.81 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_29 - 383 AAA_10 PF12846.2 304 0.00036 13.0 0.0 1 1 3.3e-05 0.00072 12.0 0.0 2 21 158 177 157 195 0.86 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_60 - 730 SbcCD_C PF13558.1 90 6.7e-05 15.8 0.2 1 1 5.4e-06 0.00059 12.8 0.1 20 86 623 676 606 680 0.75 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_65 - 283 Methyltransf_27 PF13708.1 194 1e-66 217.2 0.0 1 1 1.3e-68 1.4e-66 216.7 0.0 2 194 85 278 84 278 0.96 # 63612 # 64460 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_55 - 764 TrwB_AAD_bind PF10412.4 386 2.6e-06 19.3 0.2 1 2 9.3e-05 0.01 7.4 0.0 11 32 132 153 126 157 0.84 # 52010 # 54301 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_55 - 764 TrwB_AAD_bind PF10412.4 386 2.6e-06 19.3 0.2 2 2 3.1e-05 0.0034 9.0 0.1 247 332 440 525 427 542 0.88 # 52010 # 54301 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_52 - 411 TIGR00344 TIGR00344 847 0.00028 11.8 0.5 1 1 3.8e-06 0.00042 11.3 0.5 681 778 189 283 180 296 0.76 # 48079 # 49311 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.490 1_85 - 228 MethyltransfD12 PF02086.10 260 0.00037 13.0 0.0 1 2 0.014 1.6 1.1 0.0 175 188 18 31 8 91 0.80 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_85 - 228 MethyltransfD12 PF02086.10 260 0.00037 13.0 0.0 2 2 3.3e-05 0.0036 9.7 0.0 16 46 157 189 148 197 0.78 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_2 - 178 TIGR00922 TIGR00922 172 0.00087 11.9 0.0 1 1 9.5e-06 0.001 11.6 0.0 47 103 51 109 24 142 0.80 # 1428 # 1961 # 1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.436 1_29 - 383 AAA_25 PF13481.1 194 0.00024 13.5 0.0 1 1 1.2e-05 0.00043 12.7 0.0 25 55 149 179 124 203 0.83 # 24760 # 25908 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_60 - 730 AAA_25 PF13481.1 194 0.00033 13.1 0.0 1 1 2.9e-05 0.0011 11.4 0.0 29 51 521 543 500 555 0.84 # 57078 # 59267 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_14 - 518 AAA_25 PF13481.1 194 0.00034 13.1 0.0 1 2 0.00013 0.0048 9.3 0.0 25 65 217 260 200 270 0.72 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 518 AAA_25 PF13481.1 194 0.00034 13.1 0.0 2 2 0.058 2.1 0.7 0.0 153 190 297 337 292 340 0.74 # 10404 # 11957 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_85 - 228 Methyltransf_15 PF09445.5 164 0.00087 11.9 0.0 1 2 0.045 4.9 -0.3 0.0 53 79 4 29 2 32 0.90 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_85 - 228 Methyltransf_15 PF09445.5 164 0.00087 11.9 0.0 2 2 4.2e-05 0.0046 9.5 0.0 3 31 166 194 164 209 0.86 # 77406 # 78089 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3a846055-2ee9-455a-9d31-e31d3affed6f # Target file: checkm_output/bins/pm309/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm309/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3a846055-2ee9-455a-9d31-e31d3affed6f checkm_output/bins/pm309/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:04:40 2020 # [ok]