# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_76 - 231 OB_NTP_bind PF07717.11 114 0.00064 12.6 0.0 1 1 1e-05 0.0011 11.8 0.0 24 82 28 96 16 121 0.76 # 66756 # 67448 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_26 - 228 UPF0020 PF01170.13 180 1.8e-05 17.3 0.0 1 2 0.00039 0.042 6.4 0.0 104 123 18 37 5 89 0.71 # 22281 # 22964 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_26 - 228 UPF0020 PF01170.13 180 1.8e-05 17.3 0.0 2 2 6.2e-05 0.0065 9.0 0.0 28 54 163 189 158 221 0.67 # 22281 # 22964 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_18 - 215 cobW PF02492.14 178 0.00052 12.5 0.8 1 1 1.2e-05 0.0013 11.2 0.8 3 46 3 48 1 130 0.69 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 Thymidylate_kin PF02223.12 186 0.00054 12.3 0.3 1 2 2.2e-05 0.0024 10.2 0.0 6 29 11 34 9 47 0.91 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 Thymidylate_kin PF02223.12 186 0.00054 12.3 0.3 2 2 0.042 4.5 -0.4 0.0 115 164 128 185 108 209 0.53 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_51 - 730 Rad17 PF03215.10 519 3.4e-05 15.6 0.0 1 1 5.7e-07 6e-05 14.8 0.0 35 72 515 552 505 604 0.80 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_18 - 215 MipZ PF09140.6 261 9.6e-16 50.6 3.3 1 3 1.9e-11 2e-09 29.8 0.2 2 53 2 52 1 61 0.88 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 MipZ PF09140.6 261 9.6e-16 50.6 3.3 2 3 3.3e-08 3.5e-06 19.2 0.2 84 145 64 125 59 134 0.90 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 MipZ PF09140.6 261 9.6e-16 50.6 3.3 3 3 0.015 1.6 0.7 0.0 231 256 184 209 171 211 0.76 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 YhjQ PF06564.7 244 0.00058 12.2 0.8 1 2 3.3e-05 0.0035 9.7 0.2 6 36 5 35 1 39 0.87 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 YhjQ PF06564.7 244 0.00058 12.2 0.8 2 2 0.015 1.6 0.9 0.0 99 160 62 124 49 131 0.63 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_34 - 176 SSB PF00436.20 104 1.5e-40 130.3 0.2 1 1 1.9e-42 2e-40 129.9 0.2 1 101 6 109 6 112 0.95 # 26723 # 27250 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.602 1_81 - 383 DUF87 PF01935.12 229 0.00065 12.5 0.0 1 1 1.1e-05 0.0012 11.7 0.0 28 56 162 191 161 192 0.88 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_51 - 730 AAA_22 PF13401.1 131 5.1e-06 19.7 0.1 1 2 3.4e-05 0.0012 12.0 0.1 5 24 526 545 524 568 0.90 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_51 - 730 AAA_22 PF13401.1 131 5.1e-06 19.7 0.1 2 2 0.0058 0.2 4.8 0.0 56 122 626 688 621 693 0.67 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_81 - 383 AAA_22 PF13401.1 131 1e-05 18.7 0.0 1 1 7.4e-07 2.6e-05 17.4 0.0 4 46 157 196 152 233 0.76 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_95 - 518 AAA_22 PF13401.1 131 0.00028 14.0 0.0 1 1 1.9e-05 0.00067 12.8 0.0 6 28 227 249 222 330 0.77 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_81 - 383 ATP_bind_1 PF03029.12 238 4.9e-05 15.9 0.0 1 1 7.2e-07 7.6e-05 15.3 0.0 1 23 162 184 162 197 0.86 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_18 - 215 SRP54 PF00448.17 196 2.8e-11 36.2 0.3 1 1 5e-13 5.3e-11 35.3 0.3 6 98 4 93 1 98 0.79 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_26 - 228 N6_N4_Mtase PF01555.13 231 8.1e-37 119.9 0.0 1 1 3.4e-36 3.6e-34 111.2 0.0 1 228 21 200 21 203 0.89 # 22281 # 22964 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_81 - 383 AAA_17 PF13207.1 121 2.2e-05 18.3 0.1 1 1 9.4e-06 0.00025 14.9 0.0 3 47 161 208 161 251 0.76 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_95 - 518 AAA_17 PF13207.1 121 2.5e-05 18.1 0.2 1 1 4.1e-06 0.00011 16.0 0.0 1 24 227 255 227 347 0.72 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_51 - 730 AAA_17 PF13207.1 121 4.6e-05 17.3 0.0 1 1 5.3e-06 0.00014 15.7 0.0 1 31 527 567 527 616 0.72 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_18 - 215 AAA_17 PF13207.1 121 0.00041 14.2 0.1 1 1 2.1e-05 0.00056 13.8 0.1 9 76 11 85 2 183 0.69 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_51 - 730 AAA_21 PF13304.1 303 3.1e-08 26.8 0.7 1 2 5.2e-06 0.00055 12.9 0.1 2 62 528 594 527 603 0.69 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_51 - 730 AAA_21 PF13304.1 303 3.1e-08 26.8 0.7 2 2 1.4e-05 0.0015 11.5 0.0 237 284 636 680 629 694 0.88 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_81 - 383 MobB PF03205.9 140 2e-05 17.3 0.0 1 2 0.033 1.8 1.3 0.0 14 60 61 108 61 127 0.88 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_81 - 383 MobB PF03205.9 140 2e-05 17.3 0.0 2 2 6.2e-06 0.00033 13.4 0.0 5 26 162 183 160 193 0.90 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_18 - 215 MobB PF03205.9 140 0.00016 14.4 0.2 1 1 6.1e-06 0.00032 13.4 0.2 5 39 4 39 1 88 0.70 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 ArsA_ATPase PF02374.10 305 1.2e-08 27.3 3.9 1 3 1.6e-08 1.7e-06 20.2 0.8 6 38 5 38 1 39 0.85 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 ArsA_ATPase PF02374.10 305 1.2e-08 27.3 3.9 2 3 0.0001 0.011 7.7 0.0 96 135 46 87 35 89 0.83 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 ArsA_ATPase PF02374.10 305 1.2e-08 27.3 3.9 3 3 0.095 10 -2.0 0.0 73 108 133 167 111 187 0.54 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_95 - 518 T2SE PF00437.15 272 2.5e-41 134.3 0.1 1 1 9.6e-43 5.1e-41 133.3 0.0 10 271 97 373 90 374 0.85 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_81 - 383 T2SE PF00437.15 272 8.4e-36 116.2 0.0 1 1 2.4e-37 1.3e-35 115.6 0.0 120 269 149 306 127 309 0.88 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_18 - 215 SKI PF01202.17 158 0.00071 12.4 0.4 1 2 0.0009 0.095 5.5 0.2 2 16 11 25 10 31 0.89 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 SKI PF01202.17 158 0.00071 12.4 0.4 2 2 0.0013 0.14 5.0 0.0 87 150 31 95 24 109 0.72 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_95 - 518 G-alpha PF00503.15 389 0.00067 11.3 0.0 1 2 0.054 5.7 -1.6 0.0 234 272 70 113 29 117 0.79 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_95 - 518 G-alpha PF00503.15 389 0.00067 11.3 0.0 2 2 1.9e-05 0.002 9.8 0.0 58 87 225 254 214 324 0.84 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_18 - 215 Zeta_toxin PF06414.7 201 0.00012 14.1 0.0 1 1 2e-06 0.00021 13.4 0.0 20 109 4 94 1 103 0.79 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_51 - 730 SMC_N PF02463.14 220 1e-08 27.6 0.1 1 2 0.00033 0.035 6.3 0.0 19 44 520 545 511 558 0.81 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_51 - 730 SMC_N PF02463.14 220 1e-08 27.6 0.1 2 2 4.4e-08 4.6e-06 19.0 0.0 137 209 636 702 567 709 0.90 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_18 - 215 VirC1 PF07015.6 231 2.8e-08 26.1 0.1 1 1 3.3e-10 3.5e-08 25.8 0.1 8 200 7 199 1 209 0.72 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 Fer4_NifH PF00142.13 273 0.00012 14.3 1.4 1 2 2.4e-06 0.00025 13.2 0.3 8 37 9 38 1 47 0.85 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 Fer4_NifH PF00142.13 273 0.00012 14.3 1.4 2 2 0.031 3.3 -0.3 0.0 189 210 67 88 40 147 0.59 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_51 - 730 AAA_16 PF13191.1 185 4.9e-05 16.4 1.0 1 1 6.3e-06 0.00022 14.2 1.0 24 51 525 552 517 688 0.68 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_95 - 518 AAA_16 PF13191.1 185 0.0001 15.3 0.0 1 1 9.6e-06 0.00034 13.6 0.0 8 51 213 252 212 301 0.78 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_81 - 383 AAA_16 PF13191.1 185 0.0003 13.8 0.0 1 1 1.8e-05 0.00065 12.7 0.0 27 52 160 188 148 282 0.82 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_95 - 518 AAA_23 PF13476.1 202 0.00014 15.2 0.2 1 1 1.5e-05 0.00051 13.4 0.0 20 38 226 244 208 249 0.84 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_81 - 383 AAA_23 PF13476.1 202 0.00024 14.5 0.0 1 1 1.1e-05 0.00039 13.8 0.0 19 40 157 178 142 209 0.83 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_51 - 730 AAA_23 PF13476.1 202 0.00055 13.3 0.0 1 1 2.5e-05 0.0009 12.6 0.0 20 53 526 559 502 613 0.79 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_81 - 383 AAA_18 PF13238.1 129 1.6e-05 18.2 0.0 1 1 9e-07 3.2e-05 17.3 0.0 2 42 161 197 161 230 0.83 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_95 - 518 AAA_18 PF13238.1 129 0.00039 13.7 0.0 1 1 3.2e-05 0.0011 12.2 0.0 1 18 228 245 228 316 0.86 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_18 - 215 AAA_18 PF13238.1 129 0.00047 13.5 0.1 1 1 2.9e-05 0.001 12.4 0.1 8 42 11 45 9 130 0.73 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 CbiA PF01656.18 195 5e-18 58.2 0.0 1 1 6.5e-20 6.9e-18 57.7 0.0 2 148 4 138 3 182 0.72 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_51 - 730 AAA_14 PF13173.1 128 0.00031 13.6 0.0 1 1 1.9e-05 0.001 12.0 0.0 3 76 526 605 524 621 0.59 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_95 - 518 AAA_14 PF13173.1 128 0.00084 12.3 0.0 1 1 7.4e-05 0.0039 10.1 0.0 5 30 228 254 225 286 0.80 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_51 - 730 AAA_29 PF13555.1 62 2.5e-05 16.8 0.1 1 1 2e-06 7e-05 15.4 0.1 23 49 525 551 515 559 0.75 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_95 - 518 AAA_29 PF13555.1 62 3e-05 16.5 0.0 1 1 1.7e-06 6.1e-05 15.6 0.0 21 40 224 242 217 254 0.83 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_81 - 383 AAA_29 PF13555.1 62 4e-05 16.1 0.0 1 1 3.4e-06 0.00012 14.6 0.0 26 44 160 178 151 186 0.83 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_95 - 518 AAA PF00004.24 132 0.00027 14.2 0.1 1 3 0.064 6.8 -0.1 0.0 38 57 81 100 52 110 0.81 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_95 - 518 AAA PF00004.24 132 0.00027 14.2 0.1 2 3 0.00033 0.035 7.3 0.0 1 21 228 248 228 278 0.83 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_95 - 518 AAA PF00004.24 132 0.00027 14.2 0.1 3 3 0.017 1.8 1.8 0.0 9 66 442 508 436 515 0.64 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_51 - 730 DUF258 PF03193.11 161 5.8e-05 15.3 0.0 1 1 1e-06 0.00011 14.5 0.0 34 65 524 555 500 580 0.82 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_56 - 764 TraG-D_C PF12696.2 128 3.3e-07 23.2 0.2 1 1 6.9e-09 7.3e-07 22.1 0.2 1 88 437 524 437 554 0.82 # 46099 # 48390 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.503 1_18 - 215 AAA_31 PF13614.1 157 1.3e-09 31.1 0.2 1 2 1e-09 1.1e-07 24.9 0.1 2 42 2 42 1 70 0.86 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 AAA_31 PF13614.1 157 1.3e-09 31.1 0.2 2 2 0.0022 0.24 4.3 0.0 106 134 67 95 60 109 0.82 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_51 - 730 NTPase_1 PF03266.10 168 0.00065 12.4 0.1 1 1 1.3e-05 0.0014 11.4 0.1 2 22 528 548 527 580 0.82 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_18 - 215 AAA_33 PF13671.1 143 0.00013 14.8 0.1 1 2 7.8e-06 0.00082 12.3 0.1 9 85 11 94 3 182 0.74 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 AAA_33 PF13671.1 143 0.00013 14.8 0.1 2 2 0.027 2.9 0.8 0.0 75 96 145 166 134 208 0.73 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 KTI12 PF08433.5 270 0.00016 13.9 0.1 1 2 3.3e-06 0.00035 12.8 0.0 11 49 11 49 1 64 0.86 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 215 KTI12 PF08433.5 270 0.00016 13.9 0.1 2 2 0.079 8.4 -1.6 0.0 222 222 113 113 58 163 0.50 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_26 - 228 Methyltransf_26 PF13659.1 117 1.9e-11 37.1 0.0 1 2 4.2e-07 4.5e-05 16.5 0.0 57 114 7 71 2 74 0.72 # 22281 # 22964 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_26 - 228 Methyltransf_26 PF13659.1 117 1.9e-11 37.1 0.0 2 2 9.7e-08 1e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 22281 # 22964 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_95 - 518 AAA_30 PF13604.1 196 0.00034 13.2 0.0 1 1 5.8e-06 0.00061 12.4 0.0 4 44 211 251 209 276 0.84 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_84 - 195 DNA_pol3_delta PF06144.8 172 2.2e-06 20.3 0.0 1 1 3e-08 3.2e-06 19.7 0.0 35 99 92 152 74 179 0.80 # 75333 # 75917 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.405 1_51 - 730 ABC_tran PF00005.22 137 2.8e-32 104.9 0.0 1 1 1.5e-33 5.4e-32 103.9 0.0 1 137 515 664 515 664 0.86 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_95 - 518 ABC_tran PF00005.22 137 9e-05 15.8 0.0 1 1 8e-06 0.00028 14.2 0.0 12 37 226 251 217 289 0.81 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_81 - 383 ABC_tran PF00005.22 137 0.00012 15.4 0.0 1 1 6.5e-06 0.00023 14.5 0.0 16 35 162 181 152 211 0.87 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_26 - 228 Cons_hypoth95 PF03602.10 183 2.3e-05 16.9 0.0 1 2 0.00065 0.069 5.5 0.0 114 146 20 54 10 82 0.65 # 22281 # 22964 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_26 - 228 Cons_hypoth95 PF03602.10 183 2.3e-05 16.9 0.0 2 2 4e-05 0.0043 9.4 0.0 41 62 162 183 145 218 0.78 # 22281 # 22964 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_95 - 518 DAP3 PF10236.4 309 0.00066 11.6 0.0 1 1 1.2e-05 0.0013 10.7 0.0 21 42 223 244 215 253 0.86 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_95 - 518 AAA_19 PF13245.1 76 0.0001 15.1 0.0 1 1 5.3e-06 0.00028 13.7 0.0 10 46 226 259 218 268 0.79 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_18 - 215 AAA_19 PF13245.1 76 0.00023 13.9 0.6 1 1 1.1e-05 0.00057 12.7 0.4 20 56 11 45 3 64 0.81 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_68 - 1015 AAA_10 PF12846.2 304 1.2e-30 99.9 0.0 1 1 1.3e-31 2.8e-30 98.7 0.0 8 302 502 897 498 898 0.89 # 58614 # 61658 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.509 1_56 - 764 AAA_10 PF12846.2 304 2.7e-05 16.7 1.0 1 1 3.9e-06 8.2e-05 15.1 1.0 2 287 137 501 136 514 0.62 # 46099 # 48390 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.503 1_51 - 730 AAA_10 PF12846.2 304 6.7e-05 15.4 0.0 1 2 4.3e-05 0.0009 11.7 0.0 4 22 528 546 526 572 0.88 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_51 - 730 AAA_10 PF12846.2 304 6.7e-05 15.4 0.0 2 2 0.076 1.6 1.0 0.0 218 272 651 701 602 715 0.81 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_95 - 518 AAA_10 PF12846.2 304 0.00024 13.6 0.0 1 1 2.1e-05 0.00044 12.7 0.0 4 30 228 256 226 320 0.81 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_81 - 383 AAA_10 PF12846.2 304 0.00056 12.3 0.0 1 1 5e-05 0.0011 11.4 0.0 2 21 158 177 157 196 0.83 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_51 - 730 SbcCD_C PF13558.1 90 6.5e-05 15.8 0.2 1 1 5.4e-06 0.00057 12.8 0.1 20 86 623 676 606 680 0.75 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_18 - 215 DUF2075 PF09848.4 352 8.7e-06 17.8 0.1 1 1 9.3e-08 9.8e-06 17.7 0.1 5 95 4 90 1 137 0.75 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_46 - 283 Methyltransf_27 PF13708.1 194 9.7e-67 217.2 0.0 1 1 1.2e-68 1.3e-66 216.8 0.0 2 194 85 278 84 278 0.96 # 35942 # 36790 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_56 - 764 TrwB_AAD_bind PF10412.4 386 1e-06 20.5 0.3 1 2 9.3e-05 0.0099 7.4 0.0 11 32 132 153 126 157 0.84 # 46099 # 48390 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.503 1_56 - 764 TrwB_AAD_bind PF10412.4 386 1e-06 20.5 0.3 2 2 1.3e-05 0.0014 10.2 0.1 247 332 440 525 427 555 0.88 # 46099 # 48390 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.503 1_26 - 228 MethyltransfD12 PF02086.10 260 0.00033 13.1 0.0 1 2 0.011 1.1 1.5 0.0 174 188 17 31 8 90 0.84 # 22281 # 22964 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_26 - 228 MethyltransfD12 PF02086.10 260 0.00033 13.1 0.0 2 2 4e-05 0.0042 9.5 0.0 20 46 163 189 148 197 0.78 # 22281 # 22964 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_81 - 383 RNA_helicase PF00910.17 107 0.0001 15.5 0.0 1 1 1.9e-06 0.0002 14.5 0.0 2 28 161 187 160 205 0.83 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_18 - 215 AAA_25 PF13481.1 194 3.2e-05 16.4 0.5 1 1 3.4e-06 9e-05 14.9 0.3 41 149 9 85 2 109 0.65 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_81 - 383 AAA_25 PF13481.1 194 0.00021 13.7 0.0 1 1 1.4e-05 0.00037 12.9 0.0 24 58 148 182 124 207 0.78 # 72520 # 73668 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_95 - 518 AAA_25 PF13481.1 194 0.0003 13.2 0.1 1 2 0.00017 0.0046 9.3 0.0 25 65 217 260 200 270 0.72 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_95 - 518 AAA_25 PF13481.1 194 0.0003 13.2 0.1 2 2 0.077 2 0.7 0.0 153 190 297 337 292 340 0.74 # 84866 # 86419 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468 1_51 - 730 AAA_25 PF13481.1 194 0.00032 13.1 0.0 1 1 3.9e-05 0.001 11.4 0.0 29 51 521 543 500 555 0.84 # 41134 # 43323 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_18 - 215 APS_kinase PF01583.15 157 3e-06 20.0 0.1 1 1 5.8e-08 6.2e-06 18.9 0.1 11 43 10 42 2 53 0.88 # 13970 # 14614 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5acc8c49-32bc-4d5d-aa08-0e1cb3880a64 # Target file: checkm_output/bins/pm307/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm307/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5acc8c49-32bc-4d5d-aa08-0e1cb3880a64 checkm_output/bins/pm307/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:04:38 2020 # [ok]