# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 21_3 - 252 Mg_chelatase PF01078.16 207 0.0013 12.2 0.0 1 1 1.7e-05 0.0022 11.4 0.0 22 42 99 119 94 129 0.88 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 26_2 - 266 Mg_chelatase PF01078.16 207 0.0014 12.1 0.0 1 1 2.1e-05 0.0027 11.1 0.0 23 42 98 117 84 124 0.89 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_5 - 409 ATP_bind_3 PF01171.15 182 4.6e-06 20.5 0.0 1 1 2.9e-08 7.6e-06 19.8 0.0 2 41 32 72 31 97 0.84 # 2584 # 3810 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 21_3 - 252 Rad17 PF03215.10 519 0.0005 13.1 0.0 1 1 2.2e-06 0.00059 12.8 0.0 35 67 91 121 80 210 0.84 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 26_2 - 266 IstB_IS21 PF01695.12 178 3.3e-77 252.2 0.7 1 1 1.3e-78 7e-77 251.1 0.0 1 177 51 227 51 228 0.99 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 IstB_IS21 PF01695.12 178 6.8e-58 189.3 0.0 1 1 1.8e-59 9.3e-58 188.8 0.0 3 178 55 230 53 230 0.99 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 9_7 - 96 IstB_IS21 PF01695.12 178 1.7e-15 51.1 0.0 1 1 4.6e-17 2.4e-15 50.6 0.0 134 174 42 82 36 85 0.92 # 5571 # 5858 # -1 # ID=9_7;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 18_4 - 78 IstB_IS21 PF01695.12 178 6.6e-13 42.7 0.0 1 1 1.5e-14 7.8e-13 42.5 0.0 1 56 11 66 11 69 0.96 # 1140 # 1373 # -1 # ID=18_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.496 32_1 - 87 IstB_IS21 PF01695.12 178 1.4e-12 41.6 0.0 1 1 2.9e-14 1.5e-12 41.5 0.0 45 74 41 70 24 82 0.89 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 7_3 - 400 MipZ PF09140.6 261 3.5e-08 27.1 0.1 1 2 0.0004 0.11 5.8 0.0 2 48 110 161 109 186 0.76 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 7_3 - 400 MipZ PF09140.6 261 3.5e-08 27.1 0.1 2 2 3.8e-08 1e-05 19.0 0.0 88 135 234 281 216 288 0.87 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 7_3 - 400 YhjQ PF06564.7 244 0.0013 12.3 0.7 1 3 0.076 20 -1.3 0.0 175 199 28 53 2 95 0.53 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 7_3 - 400 YhjQ PF06564.7 244 0.0013 12.3 0.7 2 3 0.038 10 -0.4 0.0 9 46 116 159 110 169 0.63 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 7_3 - 400 YhjQ PF06564.7 244 0.0013 12.3 0.7 3 3 3.7e-05 0.0098 9.5 0.0 106 183 235 311 215 322 0.78 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 3_5 - 1757 UvrD_C_2 PF13538.1 104 3.9e-07 24.5 0.7 1 2 0.037 4.9 1.7 0.0 6 44 1227 1265 1223 1294 0.76 # 3450 # 8720 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599 3_5 - 1757 UvrD_C_2 PF13538.1 104 3.9e-07 24.5 0.7 2 2 7.9e-08 1e-05 19.9 0.2 3 102 1341 1444 1339 1446 0.77 # 3450 # 8720 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599 15_2 - 950 UvrD_C_2 PF13538.1 104 4.1e-07 24.4 1.0 1 1 5.2e-08 6.9e-06 20.5 1.0 46 104 451 553 409 553 0.73 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 1_32 - 431 DUF87 PF01935.12 229 0.00054 14.1 0.2 1 1 7.3e-06 0.002 12.3 0.0 24 45 153 174 152 180 0.92 # 26555 # 27847 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 26_2 - 266 AAA_22 PF13401.1 131 8.4e-07 23.5 0.3 1 2 0.00015 0.0068 10.8 0.0 5 21 98 114 94 134 0.85 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 AAA_22 PF13401.1 131 8.4e-07 23.5 0.3 2 2 0.00022 0.0098 10.3 0.1 77 121 147 195 132 203 0.72 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 AAA_22 PF13401.1 131 2.7e-06 21.9 1.0 1 1 5.5e-07 2.4e-05 18.8 0.8 4 58 99 158 94 201 0.65 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 15_2 - 950 AAA_22 PF13401.1 131 3.3e-05 18.3 0.0 1 2 0.00092 0.041 8.3 0.0 6 28 141 163 135 210 0.82 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 AAA_22 PF13401.1 131 3.3e-05 18.3 0.0 2 2 0.0033 0.15 6.5 0.0 74 124 301 349 266 355 0.73 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 32_1 - 87 AAA_22 PF13401.1 131 0.00068 14.1 0.0 1 1 1.9e-05 0.00084 13.8 0.0 5 22 44 61 40 81 0.83 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 1_32 - 431 AAA_22 PF13401.1 131 0.00078 13.9 0.0 1 1 0.00021 0.0095 10.4 0.0 9 63 157 232 151 280 0.68 # 26555 # 27847 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 8_6 - 436 AAA_22 PF13401.1 131 0.0024 12.3 1.0 1 1 0.00079 0.035 8.5 0.0 12 85 266 351 264 415 0.78 # 4047 # 5354 # -1 # ID=8_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.559 16_5 - 87 Rad60-SLD PF11976.3 72 0.00028 14.8 0.1 1 1 1.5e-06 0.00041 14.3 0.1 12 39 41 68 33 77 0.83 # 2835 # 3095 # -1 # ID=16_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.418 26_2 - 266 AAA_3 PF07726.6 131 0.0022 11.9 0.0 1 1 1.4e-05 0.0038 11.1 0.0 2 75 100 171 99 222 0.74 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 AAA_17 PF13207.1 121 4.7e-07 25.0 0.0 1 1 1.2e-08 1.1e-06 23.8 0.0 3 53 103 157 101 231 0.68 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 26_2 - 266 AAA_17 PF13207.1 121 2.8e-05 19.2 0.0 1 1 1.7e-06 0.00015 16.9 0.0 2 64 100 156 99 200 0.57 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_2 - 674 AAA_17 PF13207.1 121 0.00071 14.7 0.0 1 1 1.9e-05 0.0017 13.5 0.0 3 28 121 150 119 284 0.73 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 3_2 - 674 MobB PF03205.9 140 0.0029 11.6 0.0 1 1 2.4e-05 0.0063 10.5 0.0 7 34 124 151 120 157 0.89 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 7_3 - 400 ArsA_ATPase PF02374.10 305 0.0015 11.9 0.0 1 1 4.9e-05 0.0065 9.8 0.0 5 42 112 156 109 173 0.74 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 26_2 - 266 ArsA_ATPase PF02374.10 305 0.0018 11.6 0.0 1 1 2.1e-05 0.0027 11.0 0.0 6 38 102 134 98 169 0.91 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 15_2 - 950 PhoH PF02562.11 205 1.7e-07 25.0 0.0 1 2 0.0044 0.3 4.6 0.0 22 37 142 157 131 166 0.83 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 PhoH PF02562.11 205 1.7e-07 25.0 0.0 2 2 4.9e-07 3.3e-05 17.5 0.0 122 173 317 369 309 394 0.83 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 32_1 - 87 PhoH PF02562.11 205 3.2e-06 20.8 0.0 1 1 5.5e-08 3.6e-06 20.6 0.0 18 51 42 76 29 80 0.83 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 26_2 - 266 PhoH PF02562.11 205 4e-06 20.5 0.0 1 1 1.4e-07 9.3e-06 19.3 0.0 15 47 93 125 80 149 0.87 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 PhoH PF02562.11 205 3.4e-05 17.4 0.0 1 1 1.1e-06 7.6e-05 16.3 0.0 16 49 96 129 82 248 0.85 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 32_1 - 87 Ras PF00071.17 162 0.0019 11.9 0.0 1 1 8.9e-06 0.0024 11.6 0.0 2 28 46 72 45 84 0.85 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 26_2 - 266 AFG1_ATPase PF03969.11 362 3.8e-06 20.2 0.0 1 1 1.9e-08 5e-06 19.8 0.0 63 227 98 258 53 263 0.80 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 T2SE PF00437.15 272 1.3e-06 21.8 0.0 1 1 7.8e-09 2.1e-06 21.1 0.0 103 149 30 120 8 130 0.72 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_2 - 674 Zeta_toxin PF06414.7 201 0.00042 13.7 0.0 1 2 8.9e-05 0.0079 9.6 0.0 21 49 122 151 114 179 0.86 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 3_2 - 674 Zeta_toxin PF06414.7 201 0.00042 13.7 0.0 2 2 0.075 6.6 0.0 0.0 54 92 215 254 212 274 0.85 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 15_2 - 950 Zeta_toxin PF06414.7 201 0.0005 13.5 0.1 1 1 2.9e-05 0.0026 11.2 0.0 12 46 134 168 125 175 0.74 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 33_1 - 392 Zeta_toxin PF06414.7 201 0.00082 12.8 0.0 1 1 2.2e-05 0.0019 11.6 0.0 98 135 333 370 319 372 0.93 # 181 # 1356 # -1 # ID=33_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.500 1_8 - 364 RNA_pol_Rpb2_45 PF10385.4 66 0.00094 13.3 0.2 1 1 1.1e-05 0.003 11.7 0.2 10 38 294 322 286 332 0.82 # 7464 # 8555 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 7_3 - 400 VirC1 PF07015.6 231 4e-05 17.0 0.0 1 2 0.0061 1.6 2.0 0.0 6 28 113 135 110 163 0.81 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 7_3 - 400 VirC1 PF07015.6 231 4e-05 17.0 0.0 2 2 3.1e-06 0.00084 12.7 0.0 51 136 210 297 206 344 0.87 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 2_5 - 409 TIGR02432 TIGR02432 189 8.5e-07 23.0 0.0 1 1 4.9e-09 1.3e-06 22.4 0.0 2 43 32 73 31 101 0.83 # 2584 # 3810 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 1_32 - 431 Arch_ATPase PF01637.13 234 0.00014 15.8 0.0 1 1 2.5e-06 0.00034 14.6 0.0 11 129 143 253 138 265 0.63 # 26555 # 27847 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 26_2 - 266 Arch_ATPase PF01637.13 234 0.0009 13.2 0.0 1 1 3.3e-05 0.0044 11.0 0.0 18 120 95 192 81 196 0.61 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 AAA_16 PF13191.1 185 7.9e-07 23.5 0.4 1 1 3.5e-08 1.9e-06 22.3 0.2 25 104 100 168 76 195 0.70 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 15_2 - 950 AAA_16 PF13191.1 185 8.5e-06 20.1 0.0 1 1 9.6e-07 5.1e-05 17.6 0.0 23 173 138 338 118 347 0.56 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 3_2 - 674 AAA_16 PF13191.1 185 1e-05 19.9 0.0 1 1 8.7e-07 4.7e-05 17.7 0.0 21 60 114 154 109 194 0.81 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 26_2 - 266 AAA_16 PF13191.1 185 1.9e-05 19.0 1.5 1 2 0.067 3.6 1.8 0.0 127 173 25 88 3 93 0.61 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 AAA_16 PF13191.1 185 1.9e-05 19.0 1.5 2 2 1.1e-05 0.0006 14.1 0.7 23 51 96 124 88 195 0.82 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 32_1 - 87 AAA_16 PF13191.1 185 0.00015 16.1 0.0 1 1 3.5e-06 0.00019 15.7 0.0 18 41 37 60 29 64 0.84 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 21_3 - 252 AAA_23 PF13476.1 202 0.00051 14.7 0.1 1 1 4.6e-06 0.0012 13.4 0.0 22 39 102 119 90 127 0.89 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 21_3 - 252 AAA_18 PF13238.1 129 0.00019 16.0 0.0 1 1 2.7e-06 0.00036 15.1 0.0 2 33 103 146 102 206 0.56 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 26_2 - 266 AAA_18 PF13238.1 129 0.0014 13.3 0.3 1 1 2.9e-05 0.0039 11.8 0.2 1 19 100 118 100 160 0.82 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_6 - 640 adh_short PF00106.20 167 1.1e-08 29.5 0.0 1 1 2.7e-10 3.6e-08 27.8 0.1 1 144 278 416 278 433 0.78 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 6_7 - 342 adh_short PF00106.20 167 0.00017 15.8 0.0 1 1 3.2e-06 0.00042 14.5 0.0 1 86 16 96 16 145 0.74 # 3727 # 4752 # 1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 7_3 - 400 CbiA PF01656.18 195 7.3e-22 72.0 0.0 1 1 9.1e-24 1.2e-21 71.3 0.0 1 144 111 294 111 321 0.74 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 26_2 - 266 CbiA PF01656.18 195 0.00018 15.2 0.0 1 1 1.9e-06 0.00025 14.8 0.0 9 63 107 171 100 249 0.67 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_6 - 640 Polysacc_synt_2 PF02719.10 294 5.2e-131 430.1 0.0 1 1 5.4e-133 7.2e-131 429.7 0.0 1 293 280 573 280 574 0.99 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 6_7 - 342 Polysacc_synt_2 PF02719.10 294 6.3e-22 72.0 0.0 1 1 2e-23 2.6e-21 70.0 0.0 2 268 19 301 18 307 0.82 # 3727 # 4752 # 1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 26_2 - 266 AAA_14 PF13173.1 128 8.3e-08 26.5 0.0 1 1 3.7e-09 3.3e-07 24.6 0.0 3 96 98 197 96 206 0.72 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 15_2 - 950 AAA_14 PF13173.1 128 4.9e-07 24.0 0.0 1 2 6.8e-05 0.0061 10.8 0.0 4 45 141 180 138 206 0.85 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 AAA_14 PF13173.1 128 4.9e-07 24.0 0.0 2 2 0.00016 0.014 9.6 0.0 30 101 278 353 263 360 0.66 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 21_3 - 252 AAA_14 PF13173.1 128 1.7e-05 19.1 0.0 1 1 3.4e-07 3e-05 18.2 0.0 2 69 99 168 98 240 0.74 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 32_1 - 87 AAA_29 PF13555.1 62 0.00031 14.6 0.0 1 1 3.2e-06 0.00042 14.1 0.0 16 39 36 59 29 64 0.85 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 21_3 - 252 AAA_29 PF13555.1 62 0.00038 14.3 0.0 1 1 6.1e-06 0.00081 13.2 0.0 20 42 98 118 90 121 0.80 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 26_2 - 266 AAA PF00004.24 132 1.2e-08 29.5 0.0 1 1 3.9e-10 3.4e-08 28.1 0.0 1 74 100 174 100 202 0.73 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 AAA PF00004.24 132 1.5e-05 19.5 0.0 1 1 2.8e-07 2.5e-05 18.8 0.0 1 68 102 170 102 200 0.72 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 32_1 - 87 AAA PF00004.24 132 0.00048 14.6 0.0 1 1 6.9e-06 0.00061 14.3 0.0 1 30 46 75 46 83 0.78 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 26_2 - 266 Bac_DnaA PF00308.13 219 6.5e-12 39.8 0.0 1 1 1.2e-13 1.1e-11 39.1 0.0 36 139 99 199 71 212 0.87 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 Bac_DnaA PF00308.13 219 4e-06 20.9 0.0 1 1 7.8e-08 6.9e-06 20.1 0.0 37 136 102 199 91 206 0.88 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 32_1 - 87 Bac_DnaA PF00308.13 219 0.00038 14.4 0.0 1 1 5e-06 0.00045 14.2 0.0 37 64 46 73 36 80 0.85 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 15_2 - 950 UvrD_C PF13361.1 351 3.4e-07 24.3 0.0 1 2 0.0068 1.8 2.1 0.1 2 32 381 411 380 465 0.66 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 UvrD_C PF13361.1 351 3.4e-07 24.3 0.0 2 2 4.5e-08 1.2e-05 19.2 0.0 293 347 476 553 471 556 0.70 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 5_6 - 640 KR PF08659.5 181 2e-05 18.6 0.0 1 2 0.094 25 -1.3 0.0 20 57 196 233 193 247 0.79 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 5_6 - 640 KR PF08659.5 181 2e-05 18.6 0.0 2 2 3.8e-07 0.0001 16.3 0.0 3 95 280 370 279 434 0.73 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 2_5 - 409 PAPS_reduct PF01507.14 174 5e-20 66.3 0.2 1 2 5.6e-12 1.5e-09 32.2 0.0 3 52 33 87 31 115 0.90 # 2584 # 3810 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 2_5 - 409 PAPS_reduct PF01507.14 174 5e-20 66.3 0.2 2 2 5.9e-12 1.6e-09 32.1 0.1 99 160 162 234 122 249 0.88 # 2584 # 3810 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 21_3 - 252 Sigma54_activat PF00158.21 168 3.5e-05 17.6 0.0 1 1 5.1e-07 6.7e-05 16.7 0.0 20 66 97 143 82 150 0.78 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 26_2 - 266 Sigma54_activat PF00158.21 168 0.00089 13.0 0.1 1 1 0.00031 0.041 7.6 0.1 19 42 94 117 82 191 0.79 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 32_1 - 87 DUF258 PF03193.11 161 0.00048 13.6 0.0 1 1 4.1e-06 0.00055 13.4 0.0 35 54 43 62 33 80 0.81 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 21_3 - 252 DUF258 PF03193.11 161 0.00099 12.6 0.0 1 1 1e-05 0.0014 12.1 0.0 32 74 96 146 72 213 0.76 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_2 - 674 TraG-D_C PF12696.2 128 3.5e-20 66.5 0.0 1 1 2.4e-22 6.3e-20 65.6 0.0 1 127 351 473 351 474 0.86 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 2_5 - 409 Asn_synthase PF00733.16 255 7.5e-05 16.6 0.0 1 1 5.3e-07 0.00014 15.7 0.0 19 58 31 70 13 329 0.88 # 2584 # 3810 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 6_6 - 427 NAD_binding_2 PF03446.10 163 1.7e-07 25.5 0.0 1 1 3.3e-09 8.7e-07 23.2 0.0 2 103 8 130 7 139 0.80 # 2354 # 3634 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 7_3 - 400 AAA_31 PF13614.1 157 1.3e-07 25.9 0.1 1 2 0.00019 0.052 7.8 0.0 3 44 111 158 109 210 0.86 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 7_3 - 400 AAA_31 PF13614.1 157 1.3e-07 25.9 0.1 2 2 7e-07 0.00019 15.7 0.0 108 148 235 274 233 279 0.87 # 944 # 2143 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 26_2 - 266 NTPase_1 PF03266.10 168 0.0008 13.4 0.0 1 2 0.00058 0.15 6.0 0.0 2 17 100 115 99 129 0.80 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 NTPase_1 PF03266.10 168 0.0008 13.4 0.0 2 2 0.001 0.27 5.2 0.0 83 107 147 170 136 197 0.76 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 AAA_33 PF13671.1 143 0.00084 13.5 0.0 1 1 7.6e-06 0.002 12.3 0.0 2 40 100 143 100 169 0.64 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 KTI12 PF08433.5 270 0.0017 11.8 0.0 1 1 1.2e-05 0.0031 11.0 0.0 4 82 100 170 99 199 0.78 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 6_6 - 427 NAD_Gly3P_dh_N PF01210.18 157 1.2e-05 19.4 0.0 1 2 2.7e-07 7.3e-05 16.8 0.0 1 84 9 92 9 114 0.83 # 2354 # 3634 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 6_6 - 427 NAD_Gly3P_dh_N PF01210.18 157 1.2e-05 19.4 0.0 2 2 0.088 23 -1.1 0.0 67 88 377 398 372 413 0.80 # 2354 # 3634 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 3_5 - 1757 AAA_30 PF13604.1 196 1.1e-43 143.4 13.5 1 2 3.8e-05 0.0025 11.7 3.8 7 147 420 552 416 562 0.84 # 3450 # 8720 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599 3_5 - 1757 AAA_30 PF13604.1 196 1.1e-43 143.4 13.5 2 2 3.4e-43 2.3e-41 135.8 1.1 1 187 968 1157 968 1161 0.94 # 3450 # 8720 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599 15_2 - 950 AAA_30 PF13604.1 196 0.00016 15.5 0.3 1 2 0.0013 0.085 6.7 0.0 7 35 133 156 127 189 0.72 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 AAA_30 PF13604.1 196 0.00016 15.5 0.3 2 2 0.0021 0.14 6.0 0.0 90 133 306 353 286 414 0.85 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 21_3 - 252 AAA_30 PF13604.1 196 0.00084 13.2 0.0 1 1 2.9e-05 0.0019 12.1 0.0 20 119 101 188 82 197 0.82 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_2 - 674 AAA_30 PF13604.1 196 0.0015 12.4 0.0 1 1 4.7e-05 0.0031 11.4 0.0 21 57 120 156 112 162 0.85 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 6_6 - 427 ApbA PF02558.11 151 0.0011 12.7 0.0 1 2 8.4e-05 0.022 8.5 0.0 1 93 10 103 10 109 0.72 # 2354 # 3634 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 6_6 - 427 ApbA PF02558.11 151 0.0011 12.7 0.0 2 2 0.011 3 1.5 0.0 61 99 367 411 339 412 0.77 # 2354 # 3634 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 21_3 - 252 FtsK_SpoIIIE PF01580.13 205 0.00087 13.1 0.0 1 1 5.6e-06 0.0015 12.3 0.0 38 64 98 125 74 129 0.78 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 1_9 - 581 KH_4 PF13083.1 73 0.00037 14.4 0.3 1 2 3.4e-05 0.009 10.0 0.0 24 64 286 327 273 334 0.80 # 8575 # 10317 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.378 1_9 - 581 KH_4 PF13083.1 73 0.00037 14.4 0.3 2 2 0.019 5.1 1.2 0.1 38 46 432 440 428 441 0.90 # 8575 # 10317 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.378 26_2 - 266 AAA_35 PF14516.1 331 0.0011 11.9 0.2 1 3 0.0049 1.3 1.8 0.1 237 272 10 42 5 59 0.79 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 AAA_35 PF14516.1 331 0.0011 11.9 0.2 2 3 0.0042 1.1 2.0 0.0 21 75 87 141 75 153 0.77 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 AAA_35 PF14516.1 331 0.0011 11.9 0.2 3 3 0.00079 0.21 4.4 0.1 122 161 153 192 144 199 0.90 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_6 - 640 CoA_binding_3 PF13727.1 175 5.4e-15 49.9 0.2 1 2 0.094 25 -1.1 6.2 31 79 28 81 10 88 0.62 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 5_6 - 640 CoA_binding_3 PF13727.1 175 5.4e-15 49.9 0.2 2 2 2e-17 5.4e-15 49.9 0.2 4 175 67 235 65 235 0.86 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 21_3 - 252 ABC_tran PF00005.22 137 0.0004 15.0 0.1 1 1 9.7e-06 0.00086 13.9 0.0 12 42 100 130 95 240 0.76 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 32_1 - 87 ABC_tran PF00005.22 137 0.00047 14.8 0.1 1 1 2.3e-05 0.0021 12.7 0.0 10 29 42 61 36 68 0.87 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 1_32 - 431 ABC_tran PF00005.22 137 0.0009 13.8 0.0 1 1 2.1e-05 0.0019 12.8 0.0 6 35 147 176 144 225 0.82 # 26555 # 27847 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 1_32 - 431 ATP-synt_ab PF00006.20 215 6.8e-72 235.7 0.0 1 1 4e-74 1.1e-71 235.1 0.0 1 215 138 349 138 349 1.00 # 26555 # 27847 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 6_7 - 342 NAD_binding_4 PF07993.7 249 9.4e-12 38.6 0.1 1 1 1.4e-13 1.8e-11 37.7 0.1 1 200 20 197 20 244 0.76 # 3727 # 4752 # 1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 5_6 - 640 NAD_binding_4 PF07993.7 249 1.8e-06 21.3 0.1 1 2 3e-06 0.0004 13.6 0.1 1 140 282 413 282 419 0.74 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 5_6 - 640 NAD_binding_4 PF07993.7 249 1.8e-06 21.3 0.1 2 2 0.00055 0.073 6.2 0.0 164 203 413 453 408 482 0.84 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 6_6 - 427 UDPG_MGDP_dh_N PF03721.9 185 1.3e-53 175.4 0.1 1 2 4.2e-55 1.1e-52 172.4 0.0 2 182 9 184 8 190 0.96 # 2354 # 3634 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 6_6 - 427 UDPG_MGDP_dh_N PF03721.9 185 1.3e-53 175.4 0.1 2 2 0.073 19 -1.2 0.0 146 164 276 294 269 299 0.85 # 2354 # 3634 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 26_2 - 266 RuvB_N PF05496.7 234 2.8e-05 17.5 0.1 1 1 2.2e-07 5.7e-05 16.5 0.1 48 119 95 176 73 187 0.73 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 AAA_19 PF13245.1 76 2.1e-07 24.9 0.1 1 1 1.5e-08 7.7e-07 23.1 0.0 13 52 100 135 87 150 0.83 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_5 - 1757 AAA_19 PF13245.1 76 2.6e-07 24.7 1.4 1 1 2.2e-08 1.2e-06 22.5 0.3 7 76 981 1047 974 1047 0.74 # 3450 # 8720 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599 21_3 - 252 AAA_19 PF13245.1 76 0.00047 14.2 0.2 1 1 7.7e-05 0.0041 11.2 0.0 11 58 101 142 94 153 0.71 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 15_2 - 950 AAA_19 PF13245.1 76 0.0011 13.0 0.0 1 1 6.5e-05 0.0034 11.4 0.0 9 35 137 164 132 188 0.77 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 32_1 - 87 AAA_19 PF13245.1 76 0.0013 12.8 0.0 1 1 3.2e-05 0.0017 12.4 0.0 10 30 44 63 38 73 0.79 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 5_6 - 640 RmlD_sub_bind PF04321.12 287 2.5e-09 30.7 0.0 1 1 6.6e-10 8.8e-08 25.6 0.0 2 156 279 453 278 478 0.83 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 6_7 - 342 RmlD_sub_bind PF04321.12 287 2.9e-07 23.9 0.0 1 1 7.3e-09 9.7e-07 22.2 0.0 2 138 17 178 16 211 0.86 # 3727 # 4752 # 1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 6_7 - 342 NAD_binding_10 PF13460.1 183 1.5e-07 25.9 0.0 1 1 2.3e-09 6.2e-07 23.8 0.0 2 115 19 156 19 177 0.72 # 3727 # 4752 # 1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 3_2 - 674 AAA_10 PF12846.2 304 5.1e-10 33.5 0.0 1 1 1.6e-10 8.7e-09 29.4 0.0 3 294 119 423 118 430 0.69 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 26_2 - 266 AAA_10 PF12846.2 304 0.00028 14.6 0.0 1 1 1e-05 0.00055 13.7 0.0 2 35 98 131 97 173 0.88 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 AAA_10 PF12846.2 304 0.00052 13.8 0.0 1 1 1.2e-05 0.00066 13.4 0.0 3 35 101 133 99 240 0.71 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 1_32 - 431 AAA_10 PF12846.2 304 0.00072 13.3 0.1 1 1 4.3e-05 0.0023 11.7 0.1 5 48 156 205 153 424 0.74 # 26555 # 27847 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.392 32_1 - 87 AAA_10 PF12846.2 304 0.0015 12.3 0.0 1 1 3.2e-05 0.0017 12.1 0.0 1 24 43 66 43 74 0.86 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 15_2 - 950 AAA_12 PF13087.1 200 0.00019 15.2 0.0 1 2 9.5e-05 0.025 8.2 0.1 3 90 365 451 364 466 0.77 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 AAA_12 PF13087.1 200 0.00019 15.2 0.0 2 2 0.0011 0.29 4.7 0.0 144 196 471 553 436 556 0.68 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 6_7 - 342 3Beta_HSD PF01073.14 280 1.1e-23 77.6 0.1 1 1 1.2e-25 1.6e-23 77.0 0.1 1 231 19 251 19 282 0.82 # 3727 # 4752 # 1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 5_6 - 640 3Beta_HSD PF01073.14 280 7.1e-09 29.0 0.1 1 1 8.7e-11 1.2e-08 28.3 0.1 1 122 281 413 281 425 0.80 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 21_3 - 252 ResIII PF04851.10 184 0.00023 15.3 0.0 1 1 1.8e-06 0.00049 14.2 0.0 12 45 87 119 80 146 0.76 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 15_2 - 950 Viral_helicase1 PF01443.13 234 4.2e-12 40.3 1.9 1 3 0.0014 0.18 5.5 0.0 2 23 143 166 142 204 0.79 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 Viral_helicase1 PF01443.13 234 4.2e-12 40.3 1.9 2 3 1.3e-10 1.8e-08 28.5 0.2 35 202 288 490 270 498 0.82 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 Viral_helicase1 PF01443.13 234 4.2e-12 40.3 1.9 3 3 0.0042 0.56 3.9 0.1 212 232 532 552 524 554 0.75 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 3_5 - 1757 Viral_helicase1 PF01443.13 234 0.002 12.0 0.0 1 2 0.00073 0.097 6.4 0.0 1 23 988 1011 988 1147 0.79 # 3450 # 8720 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599 3_5 - 1757 Viral_helicase1 PF01443.13 234 0.002 12.0 0.0 2 2 0.0097 1.3 2.7 0.0 166 234 1382 1447 1331 1447 0.61 # 3450 # 8720 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599 15_2 - 950 DUF2075 PF09848.4 352 2.3e-07 24.3 2.0 1 3 0.00041 0.11 5.7 0.0 5 25 143 163 141 214 0.78 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 DUF2075 PF09848.4 352 2.3e-07 24.3 2.0 2 3 3.1e-05 0.0081 9.4 0.0 76 224 307 455 245 465 0.79 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 DUF2075 PF09848.4 352 2.3e-07 24.3 2.0 3 3 0.00021 0.055 6.7 0.0 316 349 521 553 510 556 0.77 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 26_2 - 266 TIP49 PF06068.8 398 0.0011 11.9 0.1 1 2 0.00014 0.036 7.0 0.0 52 71 99 118 96 135 0.77 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 TIP49 PF06068.8 398 0.0011 11.9 0.1 2 2 0.0031 0.81 2.5 0.0 295 357 181 238 158 250 0.73 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 6_7 - 342 Epimerase PF01370.16 236 4.6e-54 177.6 0.1 1 1 4.3e-56 5.8e-54 177.3 0.1 1 236 18 263 18 263 0.96 # 3727 # 4752 # 1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.343 5_6 - 640 Epimerase PF01370.16 236 7.1e-15 49.3 0.0 1 1 6.8e-16 9e-14 45.7 0.0 1 215 280 486 280 505 0.82 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 26_2 - 266 DEAD PF00270.24 169 0.0012 12.7 0.1 1 1 6.6e-05 0.0088 9.8 0.1 13 64 96 144 83 203 0.68 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 DEAD PF00270.24 169 0.0017 12.1 0.2 1 2 0.00028 0.038 7.8 0.0 11 33 96 118 81 144 0.77 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 21_3 - 252 DEAD PF00270.24 169 0.0017 12.1 0.2 2 2 0.015 2 2.1 0.1 114 158 154 198 122 200 0.65 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 21_3 - 252 DUF815 PF05673.8 250 0.00045 13.5 0.0 1 1 3.2e-06 0.00085 12.6 0.0 54 121 100 174 82 187 0.75 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 3_2 - 674 TrwB_AAD_bind PF10412.4 386 4.5e-149 490.5 0.0 1 1 2.1e-151 5.5e-149 490.2 0.0 2 386 104 493 103 493 0.99 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 3_5 - 1757 AAA_11 PF13086.1 236 0.00051 13.9 3.2 1 1 2.7e-06 0.00073 13.4 0.0 2 75 969 1039 968 1059 0.80 # 3450 # 8720 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599 21_3 - 252 Sigma54_activ_2 PF14532.1 138 9.4e-07 23.3 0.0 1 1 1.4e-08 1.9e-06 22.3 0.0 20 127 98 222 82 232 0.73 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 26_2 - 266 Sigma54_activ_2 PF14532.1 138 0.00081 13.8 0.0 1 1 2.4e-05 0.0032 11.8 0.0 17 111 93 201 82 223 0.69 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_2 - 674 T4SS-DNA_transf PF02534.9 469 1.6e-09 31.1 0.0 1 1 1.8e-11 4.7e-09 29.6 0.0 264 360 314 407 130 432 0.82 # 713 # 2734 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 5_6 - 640 DapB_N PF01113.15 124 0.0002 15.6 0.0 1 2 0.0056 1.5 3.1 0.0 2 36 142 175 141 198 0.85 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 5_6 - 640 DapB_N PF01113.15 124 0.0002 15.6 0.0 2 2 3.9e-05 0.01 10.1 0.0 3 58 280 336 278 366 0.78 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 26_2 - 266 ArgK PF03308.11 267 0.00029 14.0 0.0 1 1 2.3e-06 0.0006 12.9 0.0 27 66 95 134 81 136 0.85 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 15_2 - 950 Pox_A32 PF04665.7 241 0.0011 12.5 0.0 1 1 9.1e-06 0.0024 11.4 0.0 6 34 132 160 127 173 0.86 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 21_3 - 252 RNA_helicase PF00910.17 107 4e-05 18.1 0.0 1 1 3.2e-07 8.4e-05 17.0 0.0 2 71 103 183 102 187 0.77 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 6_6 - 427 TrkA_N PF02254.13 116 0.00091 13.5 1.2 1 2 0.00041 0.055 7.8 0.0 2 40 11 48 10 85 0.88 # 2354 # 3634 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 6_6 - 427 TrkA_N PF02254.13 116 0.00091 13.5 1.2 2 2 0.017 2.3 2.6 0.2 65 112 189 237 175 240 0.82 # 2354 # 3634 # 1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 5_6 - 640 TrkA_N PF02254.13 116 0.0017 12.7 0.0 1 2 0.00019 0.026 8.8 0.0 1 46 143 189 143 205 0.83 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 5_6 - 640 TrkA_N PF02254.13 116 0.0017 12.7 0.0 2 2 0.049 6.5 1.1 0.0 2 33 281 314 280 327 0.74 # 4133 # 6052 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.442 32_1 - 87 AAA_24 PF13479.1 213 0.00095 13.1 0.0 1 1 9.7e-06 0.0013 12.6 0.0 3 23 43 63 41 76 0.82 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 26_2 - 266 AAA_24 PF13479.1 213 0.0019 12.1 0.0 1 1 2.7e-05 0.0036 11.2 0.0 5 23 99 117 95 151 0.86 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 15_2 - 950 UvrD-helicase PF00580.16 315 2e-10 34.7 0.6 1 2 3.6e-05 0.0096 9.5 0.0 9 34 135 160 128 166 0.77 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 15_2 - 950 UvrD-helicase PF00580.16 315 2e-10 34.7 0.6 2 2 3.8e-09 1e-06 22.5 0.1 253 296 311 354 284 358 0.87 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 26_2 - 266 NACHT PF05729.7 166 0.00036 14.5 0.4 1 1 9.1e-05 0.0081 10.1 0.4 3 21 100 118 98 218 0.88 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 15_2 - 950 NACHT PF05729.7 166 0.0011 12.9 0.2 1 1 7.9e-05 0.007 10.3 0.0 3 27 142 166 140 200 0.81 # 545 # 3394 # -1 # ID=15_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.511 32_1 - 87 NACHT PF05729.7 166 0.002 12.1 0.3 1 1 8.4e-05 0.0074 10.2 0.1 3 18 46 61 44 69 0.86 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 26_2 - 266 AAA_25 PF13481.1 194 1.8e-06 21.8 0.1 1 1 4.1e-08 3.6e-06 20.8 0.1 22 65 81 130 60 186 0.70 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 32_1 - 87 AAA_25 PF13481.1 194 0.00023 14.9 0.0 1 1 3.2e-06 0.00028 14.6 0.0 31 55 41 65 31 70 0.86 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 21_3 - 252 AAA_25 PF13481.1 194 0.00056 13.6 0.1 1 1 2.8e-05 0.0025 11.5 0.0 23 56 89 122 70 146 0.80 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 26_2 - 266 AAA_28 PF13521.1 163 0.00013 16.2 1.0 1 2 1.6e-05 0.0014 12.9 0.1 2 47 100 150 99 162 0.68 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 26_2 - 266 AAA_28 PF13521.1 163 0.00013 16.2 1.0 2 2 0.014 1.2 3.3 0.0 95 135 144 178 131 200 0.71 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 21_3 - 252 AAA_28 PF13521.1 163 0.00018 15.8 0.0 1 1 3.3e-06 0.0003 15.1 0.0 3 74 103 181 101 185 0.64 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 32_1 - 87 AAA_28 PF13521.1 163 0.0027 11.9 0.0 1 1 5.2e-05 0.0046 11.2 0.0 1 23 45 67 45 81 0.80 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 21_3 - 252 AAA_5 PF07728.9 139 4.2e-05 17.6 0.0 1 1 1e-06 9e-05 16.5 0.0 1 92 101 189 101 200 0.73 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 26_2 - 266 AAA_5 PF07728.9 139 0.00022 15.3 2.4 1 1 6.8e-06 0.0006 13.8 0.7 1 19 99 117 99 192 0.84 # 1226 # 2023 # 1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 32_1 - 87 AAA_5 PF07728.9 139 0.002 12.1 0.0 1 1 3.1e-05 0.0028 11.7 0.0 1 16 45 60 45 66 0.89 # 3 # 263 # 1 # ID=32_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 21_3 - 252 APS_kinase PF01583.15 157 0.0026 11.7 0.1 1 1 2.2e-05 0.0059 10.5 0.0 5 34 102 131 99 145 0.87 # 1910 # 2665 # 1 # ID=21_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4e5bf61b-6b95-4439-b383-b759ffe142b3 # Target file: checkm_output/bins/pm274/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm274/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4e5bf61b-6b95-4439-b383-b759ffe142b3 checkm_output/bins/pm274/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:04:17 2020 # [ok]