# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_16 - 584 Thymidylate_kin PF02223.12 186 5.7e-06 18.8 0.1 1 2 0.00041 0.045 6.1 0.0 3 47 15 59 13 73 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Thymidylate_kin PF02223.12 186 5.7e-06 18.8 0.1 2 2 3.3e-05 0.0036 9.7 0.0 5 54 336 384 333 409 0.84 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 IstB_IS21 PF01695.12 178 7e-11 34.8 0.1 1 2 1.4e-06 0.00015 14.2 0.0 50 84 11 45 2 50 0.90 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 IstB_IS21 PF01695.12 178 7e-11 34.8 0.1 2 2 2.1e-07 2.3e-05 16.9 0.0 50 83 330 363 313 384 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 MipZ PF09140.6 261 7.5e-08 24.7 2.8 1 2 5.9e-05 0.0063 8.6 0.0 8 39 15 46 10 63 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 MipZ PF09140.6 261 7.5e-08 24.7 2.8 2 2 3e-06 0.00033 12.8 0.6 9 39 335 365 329 464 0.63 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 YhjQ PF06564.7 244 2.9e-09 29.6 0.1 1 3 2e-07 2.2e-05 16.9 0.0 10 52 16 58 11 154 0.64 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 YhjQ PF06564.7 244 2.9e-09 29.6 0.1 2 3 5.5e-05 0.0059 8.9 0.0 10 48 335 373 328 400 0.84 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 YhjQ PF06564.7 244 2.9e-09 29.6 0.1 3 3 0.069 7.5 -1.2 0.0 98 128 471 501 426 562 0.71 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 3HCDH_N PF02737.13 180 0.00059 12.5 0.0 1 1 4e-05 0.0022 10.7 0.0 5 35 338 368 336 409 0.75 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 3HCDH_N PF02737.13 180 0.0034 10.0 6.4 1 2 0.0095 0.51 2.9 2.4 1 30 99 128 99 134 0.93 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 3HCDH_N PF02737.13 180 0.0034 10.0 6.4 2 2 0.00018 0.0098 8.6 0.1 2 39 272 309 271 348 0.73 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 GIDA PF01134.17 392 2.8e-08 26.0 6.6 1 3 3.5e-10 3.7e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 GIDA PF01134.17 392 2.8e-08 26.0 6.6 2 3 0.038 4.1 -0.9 0.0 3 31 273 301 271 315 0.84 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 GIDA PF01134.17 392 2.8e-08 26.0 6.6 3 3 0.018 2 0.1 0.1 349 385 393 429 387 433 0.77 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_40 - 145 SSB PF00436.20 104 3.5e-32 103.4 0.2 1 1 3.8e-34 4.1e-32 103.2 0.2 2 103 7 111 6 112 0.96 # 21995 # 22429 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 3_5 - 565 Pyr_redox_2 PF07992.9 201 8.6e-44 142.8 0.0 1 1 3.2e-45 3.5e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_49 - 388 DUF87 PF01935.12 229 0.0001 15.2 0.0 1 1 1.8e-06 0.0002 14.2 0.0 28 45 157 174 155 188 0.89 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 NB-ARC PF00931.17 287 1.1e-06 20.7 0.1 1 2 0.0013 0.14 3.9 0.0 21 36 10 25 3 36 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NB-ARC PF00931.17 287 1.1e-06 20.7 0.1 2 2 8.4e-07 9.1e-05 14.4 0.0 17 53 325 360 314 403 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_10 - 331 AAA_22 PF13401.1 131 5.5e-17 55.2 0.0 1 1 3.7e-18 1e-16 54.3 0.0 7 126 64 190 59 194 0.94 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_49 - 388 AAA_22 PF13401.1 131 3.2e-06 20.3 0.0 1 1 2.9e-07 7.7e-06 19.1 0.0 4 30 152 178 149 243 0.84 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_22 PF13401.1 131 4e-05 16.8 0.3 1 2 0.034 0.9 2.7 0.0 7 68 11 67 8 127 0.72 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_22 PF13401.1 131 4e-05 16.8 0.3 2 2 0.00014 0.0039 10.4 0.1 3 64 326 379 323 451 0.60 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_62 - 1017 AAA_22 PF13401.1 131 0.00017 14.7 0.0 1 1 3.4e-05 0.00091 12.4 0.0 8 70 492 558 486 594 0.69 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 2_16 - 584 ATP_bind_1 PF03029.12 238 4.1e-05 16.2 2.7 1 2 0.002 0.11 5.0 0.1 2 37 14 49 13 53 0.90 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ATP_bind_1 PF03029.12 238 4.1e-05 16.2 2.7 2 2 6e-05 0.0033 10.0 0.2 2 37 333 368 332 371 0.95 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 ATP_bind_1 PF03029.12 238 0.00088 11.8 0.0 1 1 2.6e-05 0.0014 11.2 0.0 1 25 157 181 157 191 0.84 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_5 - 565 DFP PF04127.10 185 0.00084 12.0 2.4 1 2 0.00039 0.043 6.4 0.4 28 51 105 128 99 156 0.83 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DFP PF04127.10 185 0.00084 12.0 2.4 2 2 0.0014 0.15 4.7 0.1 32 53 281 302 276 336 0.77 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 SRP54 PF00448.17 196 9e-09 28.0 3.1 1 2 2.2e-05 0.0024 10.3 0.0 2 38 9 45 8 68 0.93 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 SRP54 PF00448.17 196 9e-09 28.0 3.1 2 2 2.1e-07 2.3e-05 16.9 0.1 4 38 330 364 327 401 0.92 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 NAD_binding_7 PF13241.1 103 3.7e-07 23.4 1.2 1 2 5.4e-05 0.0058 9.9 0.2 9 38 99 128 96 184 0.89 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_7 PF13241.1 103 3.7e-07 23.4 1.2 2 2 1.4e-05 0.0015 11.8 0.1 8 41 270 306 264 380 0.74 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_62 - 1017 AAA_17 PF13207.1 121 5e-05 17.2 0.1 1 1 7.8e-06 0.00042 14.2 0.0 3 27 492 522 492 582 0.70 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 2_16 - 584 AAA_17 PF13207.1 121 0.00016 15.5 0.9 1 2 0.019 1 3.2 0.6 3 20 12 29 11 145 0.78 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_17 PF13207.1 121 0.00016 15.5 0.9 2 2 0.00019 0.01 9.7 0.0 6 32 334 362 331 456 0.57 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 Miro PF08477.8 119 0.001 12.6 0.0 1 1 2.1e-05 0.0023 11.5 0.0 4 28 157 186 156 220 0.72 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 MobB PF03205.9 140 7.7e-06 18.7 0.1 1 2 0.00038 0.021 7.6 0.0 4 38 12 45 9 88 0.79 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 MobB PF03205.9 140 7.7e-06 18.7 0.1 2 2 0.00018 0.0095 8.7 0.0 4 49 331 376 329 413 0.82 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 MobB PF03205.9 140 0.00055 12.7 0.0 1 1 2.1e-05 0.0011 11.7 0.0 4 25 156 177 154 190 0.85 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 ArsA_ATPase PF02374.10 305 1.6e-131 430.9 0.0 1 3 5e-92 2.7e-90 295.4 0.0 2 300 9 292 8 296 0.97 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ArsA_ATPase PF02374.10 305 1.6e-131 430.9 0.0 2 3 2.9e-34 1.6e-32 105.7 0.0 5 158 331 472 327 483 0.92 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ArsA_ATPase PF02374.10 305 1.6e-131 430.9 0.0 3 3 7e-10 3.8e-08 25.7 0.0 200 299 483 581 473 583 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_13 - 125 ArsA_ATPase PF02374.10 305 2.3e-12 39.5 0.0 1 1 4.6e-14 2.5e-12 39.4 0.0 200 300 24 123 8 124 0.93 # 10637 # 11011 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.533 2_16 - 584 PhoH PF02562.11 205 2.7e-08 26.3 0.6 1 2 2.6e-05 0.0028 9.9 0.1 21 63 10 52 2 110 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 PhoH PF02562.11 205 2.7e-08 26.3 0.6 2 2 2e-06 0.00022 13.5 0.0 12 47 318 355 308 379 0.79 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 T2SE PF00437.15 272 3.1e-23 75.0 0.0 1 1 4.6e-25 5e-23 74.3 0.0 11 269 24 303 15 306 0.78 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_5 - 565 NAD_binding_8 PF13450.1 68 3.8e-05 16.7 1.2 1 2 3.5e-07 3.8e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_8 PF13450.1 68 3.8e-05 16.7 1.2 2 2 0.041 4.4 0.5 0.2 1 25 274 298 274 303 0.81 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 F420_oxidored PF03807.12 96 0.0076 9.7 4.1 1 2 0.0023 0.25 4.9 1.2 2 31 100 126 99 131 0.87 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 F420_oxidored PF03807.12 96 0.0076 9.7 4.1 2 2 0.0075 0.81 3.3 0.1 1 34 271 300 271 323 0.87 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_49 - 388 SMC_N PF02463.14 220 0.0012 11.0 0.0 1 1 2.1e-05 0.0023 10.2 0.0 26 50 154 178 147 195 0.81 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 VirC1 PF07015.6 231 0.00011 14.3 1.1 1 2 0.001 0.11 4.5 0.0 9 40 15 46 10 61 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 VirC1 PF07015.6 231 0.00011 14.3 1.1 2 2 7.5e-05 0.0081 8.2 0.2 5 44 330 369 327 379 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Fer4_NifH PF00142.13 273 6e-13 41.5 0.1 1 2 1.5e-09 1.6e-07 23.7 0.0 5 58 13 65 10 89 0.81 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Fer4_NifH PF00142.13 273 6e-13 41.5 0.1 2 2 8.3e-07 8.9e-05 14.7 0.0 5 62 332 388 329 406 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Arch_ATPase PF01637.13 234 0.00089 12.0 0.0 1 2 0.0084 0.91 2.1 0.0 22 128 10 124 2 149 0.59 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Arch_ATPase PF01637.13 234 0.00089 12.0 0.0 2 2 0.00019 0.021 7.5 0.0 15 62 322 366 313 469 0.59 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_16 PF13191.1 185 1.6e-08 27.8 1.3 1 2 4.1e-05 0.0015 11.5 0.3 23 130 7 101 3 261 0.79 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_16 PF13191.1 185 1.6e-08 27.8 1.3 2 2 9.5e-06 0.00034 13.6 0.0 17 83 320 385 312 461 0.61 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_10 - 331 AAA_16 PF13191.1 185 2.2e-05 17.5 0.0 1 1 8.8e-06 0.00032 13.7 0.0 8 103 45 145 43 186 0.62 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_49 - 388 AAA_16 PF13191.1 185 0.00097 12.1 0.0 1 1 5.3e-05 0.0019 11.2 0.0 26 50 154 178 140 211 0.85 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_49 - 388 AAA_23 PF13476.1 202 2.1e-06 21.2 0.0 1 1 8.3e-08 4.5e-06 20.1 0.0 19 44 152 177 140 225 0.86 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_23 PF13476.1 202 5.7e-05 16.5 0.0 1 2 0.06 3.3 1.0 0.1 24 37 13 26 11 43 0.81 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_23 PF13476.1 202 5.7e-05 16.5 0.0 2 2 1.3e-05 0.00071 12.9 0.0 18 47 326 355 312 493 0.78 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_62 - 1017 AAA_18 PF13238.1 129 9e-05 15.8 1.2 1 1 7.4e-06 0.0004 13.7 0.0 2 19 492 509 492 568 0.77 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 2_16 - 584 AAA_18 PF13238.1 129 0.0041 10.5 1.9 1 2 0.01 0.55 3.6 0.1 2 21 12 31 11 63 0.78 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_18 PF13238.1 129 0.0041 10.5 1.9 2 2 0.0022 0.12 5.7 0.2 3 23 332 357 331 447 0.81 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 CbiA PF01656.18 195 2.6e-29 95.0 0.0 1 2 2.3e-16 2.5e-14 46.1 0.0 4 161 13 240 10 264 0.70 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 CbiA PF01656.18 195 2.6e-29 95.0 0.0 2 2 1.4e-16 1.6e-14 46.8 0.0 4 157 332 528 329 557 0.76 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 KaiC PF06745.8 227 0.00034 12.8 0.3 1 2 0.0013 0.068 5.2 0.0 24 60 13 48 8 114 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 KaiC PF06745.8 227 0.00034 12.8 0.3 2 2 0.0016 0.088 4.9 0.2 21 57 329 364 322 494 0.70 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 KaiC PF06745.8 227 0.00091 11.4 0.0 1 1 2.9e-05 0.0016 10.6 0.0 14 59 147 191 137 201 0.76 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_5 - 565 HI0933_like PF03486.9 409 2.4e-08 25.8 3.7 1 2 1.2e-06 0.00013 13.5 2.5 2 33 99 130 98 138 0.91 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 HI0933_like PF03486.9 409 2.4e-08 25.8 3.7 2 2 7.2e-06 0.00078 10.9 0.0 82 164 284 366 276 385 0.83 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_49 - 388 AAA_29 PF13555.1 62 9.6e-06 18.1 0.1 1 1 4.4e-07 2.4e-05 16.9 0.1 26 43 155 172 147 175 0.84 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_29 PF13555.1 62 1e-05 18.0 1.0 1 2 0.006 0.32 3.6 0.0 26 40 11 25 5 33 0.83 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_29 PF13555.1 62 1e-05 18.0 1.0 2 2 1.2e-05 0.00064 12.3 0.2 22 45 327 349 319 359 0.82 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 FAD_binding_2 PF00890.19 417 4.6e-06 18.6 4.7 1 3 4.3e-08 4.6e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 FAD_binding_2 PF00890.19 417 4.6e-06 18.6 4.7 2 3 0.034 3.7 -0.8 0.1 143 204 311 369 297 388 0.72 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 FAD_binding_2 PF00890.19 417 4.6e-06 18.6 4.7 3 3 0.074 8 -1.9 0.0 376 402 388 408 377 424 0.82 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 AAA PF00004.24 132 1.1e-05 18.7 1.1 1 2 0.003 0.33 4.2 0.0 2 22 12 32 11 88 0.76 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA PF00004.24 132 1.1e-05 18.7 1.1 2 2 7.4e-06 0.0008 12.7 0.4 2 23 331 352 330 517 0.84 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 Pyr_redox_3 PF13738.1 203 1.4e-17 57.4 0.1 1 2 4.4e-14 4.8e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 Pyr_redox_3 PF13738.1 203 1.4e-17 57.4 0.1 2 2 9e-07 9.7e-05 15.5 0.0 93 147 320 375 309 430 0.76 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_10 - 331 TniB PF05621.6 302 2.3e-201 659.8 5.7 1 1 2.6e-203 2.8e-201 659.6 5.7 1 287 1 287 1 300 0.98 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 2_16 - 584 DUF258 PF03193.11 161 3e-05 16.3 0.0 1 2 0.0018 0.2 3.9 0.0 37 52 10 25 2 123 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 DUF258 PF03193.11 161 3e-05 16.3 0.0 2 2 2.4e-05 0.0026 10.0 0.0 34 59 326 351 307 396 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 Ribosomal_S5 PF00333.15 67 3.3e-05 16.6 0.1 1 2 0.00091 0.098 5.5 0.0 26 45 84 103 76 114 0.83 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_49 - 388 Ribosomal_S5 PF00333.15 67 3.3e-05 16.6 0.1 2 2 0.00012 0.013 8.4 0.0 21 54 242 274 230 278 0.91 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_19 - 696 TraG-D_C PF12696.2 128 0.00015 14.7 0.1 1 1 2.4e-06 0.00026 13.9 0.1 3 94 437 524 435 556 0.78 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_16 - 584 AAA_31 PF13614.1 157 3.1e-12 39.7 0.2 1 2 1.5e-08 1.6e-06 21.1 0.0 4 127 11 145 9 155 0.74 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_31 PF13614.1 157 3.1e-12 39.7 0.2 2 2 6.3e-06 0.00068 12.6 0.0 9 43 335 369 329 413 0.74 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NTPase_1 PF03266.10 168 3.4e-05 16.6 1.9 1 3 0.0016 0.17 4.6 0.1 2 29 11 38 10 52 0.82 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NTPase_1 PF03266.10 168 3.4e-05 16.6 1.9 2 3 0.052 5.6 -0.4 0.0 107 148 179 219 174 248 0.69 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NTPase_1 PF03266.10 168 3.4e-05 16.6 1.9 3 3 5.5e-05 0.006 9.3 0.2 4 30 332 358 330 362 0.91 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_33 PF13671.1 143 0.0013 11.6 0.8 1 2 0.073 7.9 -0.6 0.0 3 31 12 45 11 88 0.71 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_33 PF13671.1 143 0.0013 11.6 0.8 2 2 7.1e-05 0.0077 9.1 0.3 1 41 329 377 329 475 0.68 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_30 PF13604.1 196 2.6e-06 20.2 0.9 1 2 0.0054 0.58 2.7 0.0 22 54 12 44 3 83 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_30 PF13604.1 196 2.6e-06 20.2 0.9 2 2 9.1e-07 9.8e-05 15.0 0.2 10 54 319 363 316 381 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 FtsK_SpoIIIE PF01580.13 205 0.00011 14.7 0.0 1 1 1.9e-06 0.00021 13.8 0.0 41 59 155 173 129 184 0.85 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 ABC_tran PF00005.22 137 1.5e-05 18.3 0.0 1 2 0.0089 0.48 3.7 0.0 14 111 11 111 8 119 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ABC_tran PF00005.22 137 1.5e-05 18.3 0.0 2 2 5.3e-05 0.0029 10.9 0.0 13 49 329 365 322 459 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 ABC_tran PF00005.22 137 0.00015 15.1 0.0 1 1 5.3e-06 0.00029 14.2 0.0 16 33 157 174 149 217 0.83 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_5 - 565 K_oxygenase PF13434.1 341 6.1e-06 18.3 0.0 1 3 0.0039 0.43 2.4 0.0 187 220 94 125 59 130 0.79 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 K_oxygenase PF13434.1 341 6.1e-06 18.3 0.0 2 3 3.3e-06 0.00036 12.5 0.0 132 231 218 308 202 332 0.82 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 K_oxygenase PF13434.1 341 6.1e-06 18.3 0.0 3 3 0.057 6.2 -1.4 0.0 132 160 346 369 314 377 0.67 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 RuvB_N PF05496.7 234 3.2e-07 22.6 0.1 1 2 0.016 1.8 0.5 0.0 52 72 10 30 5 49 0.76 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 RuvB_N PF05496.7 234 3.2e-07 22.6 0.1 2 2 3.8e-08 4.1e-06 19.0 0.0 51 119 328 400 300 407 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_19 PF13245.1 76 2.4e-09 29.9 1.9 1 2 7.2e-06 0.00039 13.2 0.0 12 50 11 44 4 50 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_19 PF13245.1 76 2.4e-09 29.9 1.9 2 2 4.8e-06 0.00026 13.8 0.2 4 45 320 358 318 378 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_62 - 1017 AAA_19 PF13245.1 76 0.00056 12.7 0.0 1 1 3.2e-05 0.0017 11.1 0.0 14 31 492 508 481 518 0.90 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_62 - 1017 AAA_10 PF12846.2 304 9.5e-41 133.1 0.0 1 1 7.3e-42 2e-40 132.1 0.0 5 297 492 884 489 889 0.91 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 2_19 - 696 AAA_10 PF12846.2 304 2.5e-10 33.2 0.1 1 1 1.3e-11 3.5e-10 32.7 0.1 2 292 134 503 133 514 0.76 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_49 - 388 AAA_10 PF12846.2 304 1.5e-06 20.8 0.0 1 1 3.3e-07 8.9e-06 18.3 0.0 3 27 154 178 152 196 0.74 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_10 PF12846.2 304 8.6e-06 18.3 0.9 1 2 0.00048 0.013 7.9 0.0 3 56 10 65 8 99 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_10 PF12846.2 304 8.6e-06 18.3 0.9 2 2 0.00038 0.01 8.2 0.1 3 44 329 372 327 420 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 adh_short_C2 PF13561.1 241 0.0003 13.6 0.0 1 2 0.00089 0.096 5.4 0.0 1 32 18 61 17 131 0.64 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 adh_short_C2 PF13561.1 241 0.0003 13.6 0.0 2 2 0.00055 0.059 6.1 0.0 5 45 340 381 336 463 0.73 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 FAD_oxidored PF12831.2 428 3.2e-06 19.4 3.6 1 1 2.9e-08 3.2e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DAO PF01266.19 358 4.6e-09 28.6 11.7 1 3 1.4e-08 1.5e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DAO PF01266.19 358 4.6e-09 28.6 11.7 2 3 0.032 3.4 -0.6 0.1 3 31 273 301 271 307 0.75 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DAO PF01266.19 358 4.6e-09 28.6 11.7 3 3 9.4e-07 0.0001 14.3 0.5 152 208 314 372 307 433 0.74 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_62 - 1017 DUF2075 PF09848.4 352 0.00042 12.3 0.0 1 1 1.1e-05 0.0012 10.8 0.0 5 22 492 509 489 533 0.86 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 3_5 - 565 NAD_binding_9 PF13454.1 156 3.1e-05 16.8 2.8 1 3 0.0081 0.88 2.3 0.1 1 41 101 135 101 162 0.81 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_9 PF13454.1 156 3.1e-05 16.8 2.8 2 3 0.034 3.6 0.3 0.0 134 155 218 241 202 242 0.72 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_9 PF13454.1 156 3.1e-05 16.8 2.8 3 3 6.6e-06 0.00072 12.4 0.1 112 155 321 366 311 367 0.85 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 Pyr_redox PF00070.22 80 3.9e-20 65.1 6.0 1 2 1.4e-06 0.00015 15.2 1.5 1 31 99 129 99 131 0.96 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 Pyr_redox PF00070.22 80 3.9e-20 65.1 6.0 2 2 6.2e-18 6.7e-16 51.6 0.2 1 74 271 345 271 354 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_30 - 287 Methyltransf_27 PF13708.1 194 2.1e-69 225.9 0.0 1 1 3.3e-71 3.5e-69 225.2 0.0 2 194 89 282 88 282 0.98 # 17465 # 18325 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.524 2_19 - 696 TrwB_AAD_bind PF10412.4 386 1.4e-06 20.2 0.4 1 3 1.6e-05 0.0017 9.9 0.0 16 36 134 154 125 162 0.88 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_19 - 696 TrwB_AAD_bind PF10412.4 386 1.4e-06 20.2 0.4 2 3 9.3e-05 0.01 7.4 0.1 93 140 235 281 229 303 0.80 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_19 - 696 TrwB_AAD_bind PF10412.4 386 1.4e-06 20.2 0.4 3 3 0.083 8.9 -2.3 0.0 293 323 482 512 405 546 0.58 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 3_10 - 331 AAA_32 PF13654.1 509 0.0001 14.0 0.0 1 2 8.6e-06 0.00092 10.9 0.0 8 81 34 112 26 124 0.86 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 3_10 - 331 AAA_32 PF13654.1 509 0.0001 14.0 0.0 2 2 0.01 1.1 0.8 0.0 472 504 255 287 242 290 0.90 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 2_16 - 584 ArgK PF03308.11 267 4.1e-07 22.0 0.3 1 2 1e-05 0.0011 10.7 0.1 34 71 13 50 9 54 0.93 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ArgK PF03308.11 267 4.1e-07 22.0 0.3 2 2 4.2e-05 0.0045 8.7 0.0 34 71 332 369 307 389 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 PIF1 PF05970.9 364 0.00017 13.6 0.1 1 2 0.00051 0.055 5.3 0.0 20 56 6 42 2 49 0.83 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 PIF1 PF05970.9 364 0.00017 13.6 0.1 2 2 0.00056 0.06 5.2 0.0 13 58 318 363 308 379 0.83 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 GTP_EFTU PF00009.22 188 0.0012 11.3 0.0 1 1 2e-05 0.0021 10.5 0.0 8 34 157 183 155 195 0.87 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 Gtr1_RagA PF04670.7 232 0.0012 11.0 0.4 1 2 0.018 2 0.5 0.1 2 16 11 25 10 27 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Gtr1_RagA PF04670.7 232 0.0012 11.0 0.4 2 2 0.00015 0.017 7.3 0.1 3 19 331 347 329 376 0.88 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 RNA_helicase PF00910.17 107 0.00084 12.6 0.2 1 2 0.037 2 1.7 0.0 2 18 12 28 11 50 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 RNA_helicase PF00910.17 107 0.00084 12.6 0.2 2 2 0.00039 0.021 8.1 0.0 2 25 331 354 330 378 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 RNA_helicase PF00910.17 107 0.0012 12.1 0.0 1 1 4.9e-05 0.0027 10.9 0.0 3 26 157 180 156 197 0.81 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_5 - 565 AlaDh_PNT_C PF01262.16 168 2.6e-05 16.9 3.1 1 2 0.00051 0.056 6.0 0.8 15 50 92 127 89 130 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 AlaDh_PNT_C PF01262.16 168 2.6e-05 16.9 3.1 2 2 2.1e-05 0.0023 10.5 0.1 16 58 265 307 257 339 0.84 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 AAA_24 PF13479.1 213 0.0064 9.1 4.4 1 2 0.0031 0.33 3.5 0.2 10 50 15 65 10 146 0.62 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_24 PF13479.1 213 0.0064 9.1 4.4 2 2 0.00059 0.063 5.8 0.7 7 22 331 346 328 352 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NACHT PF05729.7 166 0.00021 14.0 2.4 1 2 0.029 1.5 1.4 0.1 2 19 10 27 9 40 0.79 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NACHT PF05729.7 166 0.00021 14.0 2.4 2 2 3.2e-05 0.0017 11.0 0.3 4 28 331 355 329 406 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 NACHT PF05729.7 166 0.00037 13.2 0.0 1 1 1.3e-05 0.00071 12.3 0.0 4 29 156 181 154 188 0.83 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_25 PF13481.1 194 6e-11 35.1 3.5 1 2 4.3e-05 0.0023 10.3 0.3 37 79 12 44 8 126 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_25 PF13481.1 194 6e-11 35.1 3.5 2 2 1.7e-09 9.1e-08 24.7 0.2 23 151 316 449 295 496 0.63 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 AAA_25 PF13481.1 194 6.2e-06 18.7 0.0 1 1 2.6e-07 1.4e-05 17.6 0.0 24 53 143 172 120 178 0.86 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_5 PF07728.9 139 0.00036 13.3 0.1 1 2 0.014 1.5 1.6 0.0 2 31 11 43 10 66 0.76 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_5 PF07728.9 139 0.00036 13.3 0.1 2 2 8.6e-05 0.0093 8.7 0.0 3 46 331 374 330 431 0.78 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 APS_kinase PF01583.15 157 1.8e-06 20.7 0.2 1 2 1.9e-05 0.0021 10.8 0.0 4 37 10 43 7 52 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 APS_kinase PF01583.15 157 1.8e-06 20.7 0.2 2 2 0.00018 0.02 7.6 0.1 6 37 331 362 327 387 0.83 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/04cba007-613d-430d-b04a-b348831ee9a8 # Target file: checkm_output/bins/pm2089/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2089/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/04cba007-613d-430d-b04a-b348831ee9a8 checkm_output/bins/pm2089/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:03:32 2020 # [ok]