#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_2                  -            488 KaiC                 PF06745.8    227   4.6e-06   15.7   0.0   1   1   6.5e-07   7.9e-06   15.0   0.0    18    53   153   188   149   191 0.93 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637
1_2                  -            488 FtsK_SpoIIIE         PF01580.13   205   4.7e-05   12.8   0.0   1   1   7.4e-06   8.8e-05   11.9   0.0    20    62   134   179   126   181 0.82 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637
1_2                  -            488 AAA_10               PF12846.2    304   1.2e-11   34.4   0.0   1   2   1.1e-09   1.3e-08   24.5   0.0     3    68   156   225   154   267 0.83 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637
1_2                  -            488 AAA_10               PF12846.2    304   1.2e-11   34.4   0.0   2   2   0.00012    0.0014    7.9   0.0   196   293   337   433   323   440 0.73 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637
1_9                  -            562 DUF3584              PF12128.3   1201     0.013    2.6  21.2   1   2   9.7e-05    0.0012    6.1   1.9   599   657   321   379   313   387 0.82 # 6836 # 8521 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512
1_9                  -            562 DUF3584              PF12128.3   1201     0.013    2.6  21.2   2   2    0.0012     0.015    2.4  11.1   608   674   399   465   390   470 0.87 # 6836 # 8521 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512
1_2                  -            488 TrwB_AAD_bind        PF10412.4    386   1.8e-05   13.3   0.0   1   1   2.2e-06   2.7e-05   12.8   0.0    14    54   153   194   144   202 0.86 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/f382e3ac-aacb-4417-9172-94fb5b6ab8da
# Target file:     checkm_output/bins/pm2086/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pm2086/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f382e3ac-aacb-4417-9172-94fb5b6ab8da checkm_output/bins/pm2086/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 17:03:27 2020
# [ok]