# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_11 - 209 AAA_31 PF13614.1 157 9.5e-05 12.7 0.0 1 1 8.5e-06 0.00014 12.2 0.0 91 129 65 104 39 111 0.86 # 8645 # 9271 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_6 - 427 VirE PF05272.6 198 3.1e-49 157.4 0.0 1 1 2.6e-50 4.2e-49 157.0 0.0 1 198 129 323 129 323 0.90 # 4725 # 6005 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/21e02e46-9dd7-459f-a20a-0ae2af02dd04 # Target file: checkm_output/bins/pm2020/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2020/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/21e02e46-9dd7-459f-a20a-0ae2af02dd04 checkm_output/bins/pm2020/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:48 2020 # [ok]