# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_16 - 347 Mg_chelatase PF01078.16 207 3.5e-05 16.9 0.1 1 1 4.5e-07 8.7e-05 15.6 0.0 20 44 122 146 105 158 0.80 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 IstB_IS21 PF01695.12 178 1.7e-65 213.6 0.0 1 1 6.6e-67 4.3e-65 212.3 0.0 2 177 56 233 55 234 0.96 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_16 - 347 IstB_IS21 PF01695.12 178 1.2e-05 18.6 0.0 1 1 4.4e-07 2.8e-05 17.4 0.0 28 70 105 147 90 171 0.79 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 2_2 - 1051 IstB_IS21 PF01695.12 178 2.5e-05 17.6 0.0 1 1 8.2e-07 5.3e-05 16.5 0.0 46 83 439 476 420 524 0.85 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 7_3 - 209 MipZ PF09140.6 261 3.3e-21 69.3 0.5 1 2 3.6e-12 2.3e-10 33.8 0.0 2 53 2 52 1 60 0.89 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 7_3 - 209 MipZ PF09140.6 261 3.3e-21 69.3 0.5 2 2 4.7e-12 3.1e-10 33.4 0.0 87 140 65 118 58 128 0.92 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 5_5 - 216 MipZ PF09140.6 261 5.6e-17 55.5 0.6 1 2 8.8e-16 5.7e-14 45.6 0.4 2 143 2 123 1 132 0.85 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 5_5 - 216 MipZ PF09140.6 261 5.6e-17 55.5 0.6 2 2 0.028 1.8 1.3 0.0 214 235 177 198 171 209 0.82 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 4_7 - 402 MipZ PF09140.6 261 3.5e-06 20.1 0.0 1 2 0.008 0.52 3.1 0.0 3 50 111 163 109 193 0.73 # 5241 # 6446 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467 4_7 - 402 MipZ PF09140.6 261 3.5e-06 20.1 0.0 2 2 2.5e-06 0.00016 14.6 0.0 86 136 232 282 220 296 0.87 # 5241 # 6446 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467 7_3 - 209 YhjQ PF06564.7 244 4.5e-05 16.7 0.3 1 2 1.8e-06 0.00035 13.8 0.3 4 38 3 37 1 50 0.89 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 7_3 - 209 YhjQ PF06564.7 244 4.5e-05 16.7 0.3 2 2 0.029 5.7 0.0 0.0 108 144 69 103 44 113 0.78 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_61 - 186 SSB PF00436.20 104 6.9e-41 132.2 0.2 1 1 8.7e-43 8.4e-41 131.9 0.2 1 99 6 105 6 113 0.95 # 51876 # 52433 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.625 3_24 - 181 SSB PF00436.20 104 1.3e-40 131.3 0.2 1 1 1.7e-42 1.6e-40 131.0 0.2 1 99 6 105 6 113 0.96 # 23362 # 23904 # -1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.632 1_11 - 1754 UvrD_C_2 PF13538.1 104 1.6e-07 25.3 0.2 1 1 5.7e-09 1.1e-06 22.6 0.0 3 102 1340 1443 1336 1445 0.77 # 8557 # 13818 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.623 3_16 - 347 AAA_2 PF07724.9 171 5.6e-07 23.5 0.0 1 1 7.6e-09 1.5e-06 22.1 0.0 5 105 126 220 122 226 0.85 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_31 - 880 DUF87 PF01935.12 229 5.2e-06 20.2 0.0 1 2 0.056 11 -0.4 0.2 113 171 312 362 304 396 0.60 # 30825 # 33464 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_31 - 880 DUF87 PF01935.12 229 5.2e-06 20.2 0.0 2 2 1.8e-07 3.5e-05 17.5 0.0 26 222 484 674 479 681 0.82 # 30825 # 33464 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 3_1 - 260 AAA_22 PF13401.1 131 2.4e-06 21.6 0.0 1 2 1.7e-05 0.0008 13.4 0.1 4 28 101 125 98 148 0.75 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_1 - 260 AAA_22 PF13401.1 131 2.4e-06 21.6 0.0 2 2 0.0033 0.16 6.0 0.0 77 101 151 178 124 201 0.64 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_16 - 347 AAA_22 PF13401.1 131 2.2e-05 18.5 3.5 1 3 3.4e-05 0.0017 12.4 0.1 7 26 127 146 118 153 0.87 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_16 - 347 AAA_22 PF13401.1 131 2.2e-05 18.5 3.5 2 3 0.019 0.94 3.5 0.0 71 117 167 223 152 238 0.66 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_16 - 347 AAA_22 PF13401.1 131 2.2e-05 18.5 3.5 3 3 0.067 3.2 1.7 0.3 37 112 245 327 207 338 0.72 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 2_2 - 1051 AAA_22 PF13401.1 131 0.00014 15.8 0.2 1 1 1.1e-05 0.00053 14.0 0.2 6 131 442 576 436 576 0.77 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 1_11 - 1754 AAA_22 PF13401.1 131 0.00048 14.1 0.0 1 2 0.023 1.1 3.2 0.0 89 121 505 536 468 538 0.72 # 8557 # 13818 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.623 1_11 - 1754 AAA_22 PF13401.1 131 0.00048 14.1 0.0 2 2 0.0016 0.076 7.0 0.0 3 28 986 1011 983 1065 0.79 # 8557 # 13818 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.623 3_7 - 307 Methyltransf_11 PF08241.7 95 3.5e-06 21.3 0.0 1 1 4e-08 7.7e-06 20.2 0.0 49 95 183 229 139 229 0.83 # 5193 # 6113 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 6_6 - 478 DNA_methylase PF00145.12 335 4.3e-79 259.8 0.0 1 1 4.4e-81 8.6e-79 258.8 0.0 1 331 96 457 96 460 0.86 # 4427 # 5860 # -1 # ID=6_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.481 5_5 - 216 SRP54 PF00448.17 196 2.1e-07 24.4 0.2 1 1 3.3e-09 3.2e-07 23.8 0.2 6 98 4 93 1 106 0.87 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 7_3 - 209 SRP54 PF00448.17 196 4.9e-07 23.2 0.1 1 1 3e-08 2.9e-06 20.7 0.1 4 98 2 91 1 134 0.80 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 13_3 - 79 AAA_15 PF13175.1 415 1.3e-09 31.4 0.0 1 1 6.7e-12 1.3e-09 31.4 0.0 2 46 5 48 4 66 0.89 # 1079 # 1315 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 10_1 - 120 N6_N4_Mtase PF01555.13 231 6.4e-22 72.0 0.0 1 1 1.2e-23 7.6e-22 71.7 0.0 169 227 34 92 14 96 0.92 # 3 # 362 # 1 # ID=10_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.644 9_1 - 120 N6_N4_Mtase PF01555.13 231 6.4e-22 72.0 0.0 1 1 1.2e-23 7.6e-22 71.7 0.0 169 227 34 92 14 96 0.92 # 3 # 362 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.642 15_2 - 155 N6_N4_Mtase PF01555.13 231 3e-11 37.1 0.0 1 1 5.2e-13 3.3e-11 36.9 0.0 1 113 21 130 21 150 0.85 # 252 # 716 # 1 # ID=15_2;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 3_16 - 347 AAA_17 PF13207.1 121 4.6e-08 27.8 0.0 1 1 3.3e-09 1.6e-07 26.0 0.0 1 55 126 181 126 324 0.69 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 7_3 - 209 AAA_17 PF13207.1 121 4.2e-05 18.2 0.0 1 1 1.7e-06 8.2e-05 17.3 0.0 9 77 11 84 9 205 0.76 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 3_1 - 260 AAA_17 PF13207.1 121 0.00075 14.2 0.0 1 1 2.6e-05 0.0013 13.4 0.0 2 26 104 131 103 216 0.74 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_12 - 771 AAA_17 PF13207.1 121 0.0032 12.2 0.7 1 1 0.00017 0.0084 10.8 0.1 3 37 189 221 187 355 0.74 # 13818 # 16130 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 13_3 - 79 AAA_21 PF13304.1 303 5.9e-06 20.2 0.0 1 1 3.4e-08 6.5e-06 20.1 0.0 2 24 27 49 26 70 0.82 # 1079 # 1315 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 7_3 - 209 MobB PF03205.9 140 0.00011 15.7 0.1 1 1 1.6e-06 0.00031 14.3 0.0 10 42 11 41 1 46 0.79 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 7_3 - 209 ArsA_ATPase PF02374.10 305 6e-08 25.8 0.4 1 1 2.3e-09 2.3e-07 24.0 0.1 3 48 3 48 1 69 0.85 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 5_5 - 216 ArsA_ATPase PF02374.10 305 3.3e-05 16.9 1.0 1 2 3.8e-05 0.0037 10.1 0.5 7 38 7 38 1 47 0.87 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 5_5 - 216 ArsA_ATPase PF02374.10 305 3.3e-05 16.9 1.0 2 2 0.0011 0.1 5.4 0.0 100 135 50 87 37 90 0.87 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 3_1 - 260 PhoH PF02562.11 205 6.2e-07 22.7 0.1 1 1 1e-08 9.7e-07 22.0 0.1 14 56 96 138 84 163 0.80 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_16 - 347 PhoH PF02562.11 205 0.0011 12.0 0.0 1 1 2.4e-05 0.0023 11.0 0.0 19 40 124 145 103 153 0.77 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 AFG1_ATPase PF03969.11 362 0.00059 12.5 0.0 1 1 5.8e-06 0.0011 11.6 0.0 64 214 103 251 81 258 0.78 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_16 - 347 T2SE PF00437.15 272 0.00072 12.3 0.0 1 1 6.4e-06 0.0012 11.5 0.0 101 152 100 148 25 151 0.82 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_16 - 347 SKI PF01202.17 158 0.00076 13.2 0.2 1 2 0.093 18 -1.0 0.1 102 148 56 105 44 118 0.65 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_16 - 347 SKI PF01202.17 158 0.00076 13.2 0.2 2 2 1.8e-05 0.0036 11.0 0.0 1 37 133 171 133 179 0.88 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 13_3 - 79 G-alpha PF00503.15 389 0.00048 12.7 0.0 1 1 2.7e-06 0.00053 12.5 0.0 62 107 28 73 17 77 0.85 # 1079 # 1315 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 3_16 - 347 Zeta_toxin PF06414.7 201 5.1e-05 16.3 0.0 1 1 6e-07 0.00012 15.1 0.0 14 52 122 159 109 183 0.80 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 13_3 - 79 SMC_N PF02463.14 220 2.8e-11 36.9 0.0 1 1 1.6e-13 3.1e-11 36.7 0.0 2 76 4 75 3 77 0.87 # 1079 # 1315 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 7_3 - 209 VirC1 PF07015.6 231 5.3e-09 29.3 0.0 1 1 1.2e-10 1.2e-08 28.2 0.0 3 172 2 164 1 206 0.75 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 5_5 - 216 VirC1 PF07015.6 231 7.3e-09 28.8 0.1 1 1 1.1e-10 1.1e-08 28.3 0.1 6 150 5 144 1 212 0.77 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 5_5 - 216 Fer4_NifH PF00142.13 273 2.7e-05 17.3 0.2 1 1 7e-07 6.8e-05 16.0 0.1 8 39 9 40 1 49 0.85 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 7_3 - 209 Fer4_NifH PF00142.13 273 0.00014 14.9 0.0 1 1 4.6e-06 0.00044 13.3 0.0 8 38 9 39 2 46 0.89 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_12 - 771 AAA_16 PF13191.1 185 5.5e-06 20.3 0.0 1 1 5.6e-07 2.7e-05 18.0 0.0 20 56 181 218 179 254 0.78 # 13818 # 16130 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 3_16 - 347 AAA_16 PF13191.1 185 1.8e-05 18.6 1.1 1 1 1.1e-06 5.2e-05 17.1 0.2 25 81 125 182 101 325 0.81 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 AAA_16 PF13191.1 185 2.9e-05 18.0 2.4 1 1 4.8e-06 0.00023 15.0 0.1 23 51 100 128 86 149 0.80 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_2 - 1051 AAA_16 PF13191.1 185 5.9e-05 17.0 0.8 1 1 4.9e-06 0.00024 15.0 0.1 20 120 436 539 428 601 0.65 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 13_3 - 79 AAA_23 PF13476.1 202 6.9e-12 39.9 0.0 1 1 3.6e-14 6.9e-12 39.9 0.0 1 51 6 56 6 74 0.89 # 1079 # 1315 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 3_16 - 347 AAA_18 PF13238.1 129 5.7e-06 20.5 0.2 1 1 1.9e-07 3.6e-05 17.9 0.0 1 75 127 225 127 261 0.62 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 7_3 - 209 CbiA PF01656.18 195 4.7e-22 72.2 0.0 1 1 1.9e-23 9.2e-22 71.2 0.0 1 154 3 137 3 178 0.78 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 5_5 - 216 CbiA PF01656.18 195 1.8e-21 70.2 0.0 1 1 4.8e-23 2.3e-21 69.9 0.0 2 144 4 128 3 184 0.78 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 4_7 - 402 CbiA PF01656.18 195 2.1e-18 60.2 0.0 1 1 1e-19 4.9e-18 59.0 0.0 1 142 111 292 111 327 0.75 # 5241 # 6446 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467 3_1 - 260 CbiA PF01656.18 195 0.0019 11.5 0.0 1 1 5e-05 0.0024 11.1 0.0 3 42 105 145 104 254 0.75 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_16 - 347 KaiC PF06745.8 227 1e-05 18.6 0.0 1 2 1.9e-06 0.00037 13.5 0.0 10 37 115 142 105 147 0.88 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_16 - 347 KaiC PF06745.8 227 1e-05 18.6 0.0 2 2 0.0035 0.68 2.8 0.0 122 160 192 231 160 253 0.84 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 AAA_14 PF13173.1 128 6.9e-07 23.1 0.0 1 1 5.1e-08 3.3e-06 20.9 0.0 3 97 102 203 100 219 0.64 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_16 - 347 AAA_14 PF13173.1 128 0.00032 14.5 0.0 1 1 1e-05 0.00066 13.4 0.0 3 99 125 233 123 259 0.71 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 2_2 - 1051 AAA_14 PF13173.1 128 0.0014 12.4 0.0 1 1 6.3e-05 0.0041 10.9 0.0 3 71 441 515 439 578 0.71 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 13_3 - 79 AAA_29 PF13555.1 62 1.4e-08 28.1 0.0 1 1 8.6e-11 1.7e-08 27.8 0.0 2 50 5 51 4 57 0.83 # 1079 # 1315 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 3_16 - 347 AAA PF00004.24 132 1.5e-32 106.4 0.0 1 2 0.062 6 0.9 0.0 76 99 32 55 21 83 0.80 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_16 - 347 AAA PF00004.24 132 1.5e-32 106.4 0.0 2 2 1.8e-33 1.7e-31 103.0 0.0 1 130 127 251 127 253 0.94 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 AAA PF00004.24 132 4.1e-08 27.3 0.0 1 1 8.2e-10 7.9e-08 26.4 0.0 1 70 104 175 104 207 0.82 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_1 - 260 Bac_DnaA PF00308.13 219 1e-08 28.9 0.0 1 1 7.8e-11 1.5e-08 28.4 0.0 36 136 103 201 90 209 0.84 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_28 - 134 CobU PF02283.11 167 0.00075 12.8 0.2 1 1 7.1e-06 0.0014 11.9 0.0 64 112 80 129 59 133 0.70 # 29365 # 29766 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 3_1 - 260 DUF258 PF03193.11 161 0.00041 13.4 0.0 1 1 3.7e-06 0.00071 12.6 0.0 26 59 92 125 80 153 0.82 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_12 - 771 TraG-D_C PF12696.2 128 1.4e-19 64.1 0.0 1 1 1.6e-21 3e-19 63.0 0.0 1 127 419 541 419 542 0.88 # 13818 # 16130 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 5_5 - 216 AAA_31 PF13614.1 157 4.5e-09 30.3 0.2 1 2 1.4e-07 9e-06 19.5 0.0 3 42 3 42 1 47 0.89 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 5_5 - 216 AAA_31 PF13614.1 157 4.5e-09 30.3 0.2 2 2 0.00094 0.061 7.1 0.0 107 137 68 97 58 108 0.77 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 7_3 - 209 AAA_31 PF13614.1 157 8.2e-06 19.7 0.0 1 1 7.6e-07 4.9e-05 17.1 0.0 2 42 2 42 1 55 0.88 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 4_7 - 402 AAA_31 PF13614.1 157 0.0002 15.2 0.0 1 1 1.7e-05 0.0011 12.8 0.0 108 147 235 273 231 279 0.86 # 5241 # 6446 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467 3_1 - 260 NTPase_1 PF03266.10 168 0.00045 13.8 0.1 1 2 0.0015 0.29 4.6 0.1 2 30 104 132 103 143 0.82 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_1 - 260 NTPase_1 PF03266.10 168 0.00045 13.8 0.1 2 2 0.0003 0.058 6.9 0.0 87 108 155 176 141 202 0.77 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_16 - 347 AAA_33 PF13671.1 143 2.9e-07 24.3 0.0 1 1 9.4e-09 9.1e-07 22.7 0.0 2 91 127 248 127 267 0.71 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 2_2 - 1051 AAA_33 PF13671.1 143 0.00028 14.6 0.6 1 1 3.2e-05 0.0031 11.2 0.6 3 99 444 608 443 622 0.56 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 10_1 - 120 Methyltransf_26 PF13659.1 117 7.7e-06 19.8 0.1 1 1 2.2e-07 1e-05 19.4 0.1 4 45 60 100 57 115 0.80 # 3 # 362 # 1 # ID=10_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.644 9_1 - 120 Methyltransf_26 PF13659.1 117 7.7e-06 19.8 0.1 1 1 2.2e-07 1e-05 19.4 0.1 4 45 60 100 57 115 0.80 # 3 # 362 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.642 15_2 - 155 Methyltransf_26 PF13659.1 117 1.6e-05 18.8 0.0 1 1 6.1e-07 2.9e-05 17.9 0.0 62 113 12 70 3 75 0.70 # 252 # 716 # 1 # ID=15_2;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 3_7 - 307 Methyltransf_26 PF13659.1 117 0.00069 13.5 0.0 1 1 2e-05 0.00096 13.0 0.0 92 113 188 229 92 233 0.80 # 5193 # 6113 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_11 - 1754 AAA_30 PF13604.1 196 5.4e-45 147.2 5.7 1 2 1.4e-06 9.1e-05 15.9 1.0 9 126 424 536 422 561 0.86 # 8557 # 13818 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.623 1_11 - 1754 AAA_30 PF13604.1 196 5.4e-45 147.2 5.7 2 2 5e-42 3.2e-40 131.6 0.3 2 186 971 1158 970 1162 0.94 # 8557 # 13818 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.623 2_2 - 1051 AAA_30 PF13604.1 196 6.7e-07 22.9 0.1 1 1 2e-08 1.3e-06 22.0 0.1 4 104 428 524 425 539 0.78 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 2_4 - 900 AAA_30 PF13604.1 196 8.7e-05 16.0 0.0 1 1 3.5e-06 0.00022 14.6 0.0 95 135 370 406 355 409 0.85 # 5681 # 8380 # 1 # ID=2_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.446 2_2 - 1051 FtsK_SpoIIIE PF01580.13 205 4.6e-06 20.1 0.0 1 1 8.3e-08 8e-06 19.3 0.0 25 88 427 486 405 492 0.77 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 1_31 - 880 FtsK_SpoIIIE PF01580.13 205 0.00022 14.6 0.0 1 1 5.4e-06 0.00053 13.3 0.0 39 63 480 506 466 508 0.85 # 30825 # 33464 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 13_3 - 79 DUF2813 PF11398.3 373 3.3e-05 16.9 0.0 1 1 2.1e-07 4e-05 16.6 0.0 11 50 12 52 3 57 0.79 # 1079 # 1315 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 3_16 - 347 ABC_tran PF00005.22 137 0.00076 13.6 0.0 1 1 3.9e-05 0.0025 12.0 0.0 8 35 121 148 117 176 0.92 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 ABC_tran PF00005.22 137 0.001 13.2 0.2 1 1 6.1e-05 0.0039 11.3 0.1 8 31 98 121 95 132 0.86 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 13_3 - 79 ABC_tran PF00005.22 137 0.0011 13.2 0.0 1 1 1.8e-05 0.0011 13.1 0.0 15 42 28 55 17 75 0.78 # 1079 # 1315 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 10_1 - 120 Cons_hypoth95 PF03602.10 183 0.0013 12.0 0.0 1 1 1.4e-05 0.0013 11.9 0.0 19 71 34 84 27 113 0.73 # 3 # 362 # 1 # ID=10_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.644 9_1 - 120 Cons_hypoth95 PF03602.10 183 0.0013 12.0 0.0 1 1 1.4e-05 0.0013 11.9 0.0 19 71 34 84 27 113 0.73 # 3 # 362 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.642 2_2 - 1051 DAP3 PF10236.4 309 0.00063 12.5 0.0 1 1 1.2e-05 0.0012 11.6 0.0 25 59 442 476 436 516 0.86 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 13_3 - 79 DAP3 PF10236.4 309 0.0017 11.1 0.0 1 1 2e-05 0.002 10.9 0.0 11 41 12 42 3 47 0.81 # 1079 # 1315 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.540 3_16 - 347 RuvB_N PF05496.7 234 6e-05 16.0 0.0 1 1 6.7e-07 0.00013 14.9 0.0 51 78 125 152 86 195 0.79 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 2_2 - 1051 AAA_19 PF13245.1 76 5.5e-14 45.6 0.1 1 1 3.2e-15 1.2e-13 44.5 0.1 2 63 433 492 432 508 0.84 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_16 - 347 AAA_19 PF13245.1 76 2.1e-06 21.3 0.0 1 1 1.8e-07 6.9e-06 19.6 0.0 10 34 125 148 115 186 0.78 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 1_11 - 1754 AAA_19 PF13245.1 76 3.9e-06 20.4 0.4 1 1 1e-07 3.9e-06 20.4 0.4 8 74 984 1047 976 1051 0.71 # 8557 # 13818 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.623 7_3 - 209 AAA_19 PF13245.1 76 0.0011 12.6 0.1 1 1 0.00048 0.019 8.6 0.0 20 48 11 35 9 44 0.84 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 3_1 - 260 AAA_19 PF13245.1 76 0.0013 12.3 0.2 1 1 0.00013 0.0051 10.5 0.0 11 35 103 126 95 157 0.81 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_31 - 880 AAA_10 PF12846.2 304 4.1e-46 151.6 0.0 1 1 2e-47 6.6e-46 150.9 0.0 1 294 481 773 481 779 0.86 # 30825 # 33464 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_12 - 771 AAA_10 PF12846.2 304 4.1e-09 30.1 0.0 1 1 3.7e-08 1.2e-06 22.0 0.0 3 296 187 494 186 499 0.63 # 13818 # 16130 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 3_1 - 260 AAA_10 PF12846.2 304 7.2e-05 16.1 0.2 1 2 0.086 2.8 1.1 0.0 106 155 28 69 4 89 0.61 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_1 - 260 AAA_10 PF12846.2 304 7.2e-05 16.1 0.2 2 2 2.6e-05 0.00085 12.6 0.1 3 35 103 135 101 172 0.84 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 7_3 - 209 AAA_10 PF12846.2 304 0.0003 14.1 0.0 1 1 1.5e-05 0.00049 13.4 0.0 11 39 11 39 3 67 0.90 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 2_2 - 1051 AAA_10 PF12846.2 304 0.00068 12.9 0.0 1 1 6.2e-05 0.002 11.4 0.0 2 35 441 474 440 485 0.90 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 7_9 - 132 AAA_10 PF12846.2 304 0.0015 11.8 0.0 1 2 0.00041 0.013 8.7 0.0 241 264 12 35 9 45 0.89 # 6280 # 6675 # -1 # ID=7_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.551 7_9 - 132 AAA_10 PF12846.2 304 0.0015 11.8 0.0 2 2 0.08 2.6 1.2 0.0 209 235 104 128 68 130 0.72 # 6280 # 6675 # -1 # ID=7_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.551 2_4 - 900 AAA_12 PF13087.1 200 3.5e-14 46.4 0.2 1 1 9.8e-16 1.9e-13 44.1 0.2 20 198 444 625 439 627 0.82 # 5681 # 8380 # 1 # ID=2_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.446 5_5 - 216 DAO PF01266.19 358 0.0018 11.0 0.0 1 1 1.2e-05 0.0023 10.6 0.0 14 111 21 137 16 192 0.84 # 3974 # 4621 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_2 - 1051 ResIII PF04851.10 184 0.00012 15.7 0.0 1 1 3e-06 0.00029 14.5 0.0 25 80 440 498 425 564 0.69 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_16 - 347 ResIII PF04851.10 184 0.00056 13.6 0.0 1 1 1.2e-05 0.0012 12.5 0.0 22 48 119 147 96 191 0.80 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_7 - 307 Methyltransf_31 PF13847.1 152 0.00053 13.4 0.0 1 1 4.8e-06 0.00093 12.7 0.0 66 113 185 234 180 269 0.82 # 5193 # 6113 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 7_9 - 132 Zot PF05707.7 193 0.00051 13.4 0.0 1 1 4.7e-06 0.00092 12.5 0.0 98 127 5 35 1 46 0.82 # 6280 # 6675 # -1 # ID=7_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.551 2_2 - 1051 Viral_helicase1 PF01443.13 234 0.001 12.5 0.0 1 1 1.3e-05 0.0024 11.2 0.0 2 70 444 513 443 521 0.61 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_16 - 347 TIP49 PF06068.8 398 6.9e-05 15.5 0.1 1 1 7.4e-07 0.00014 14.4 0.0 42 79 115 151 103 176 0.82 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 2_2 - 1051 Adeno_IVa2 PF02456.10 370 0.0011 11.4 0.0 1 1 1.1e-05 0.002 10.6 0.0 91 127 444 478 428 488 0.85 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 2_2 - 1051 DEAD PF00270.24 169 0.0013 12.1 0.0 1 1 2e-05 0.0038 10.6 0.0 4 64 430 488 427 551 0.75 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 1_53 - 292 Methyltransf_27 PF13708.1 194 3.1e-63 206.6 0.0 1 1 2.1e-65 4.1e-63 206.2 0.0 5 194 95 287 91 287 0.93 # 45719 # 46594 # -1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_12 - 771 TrwB_AAD_bind PF10412.4 386 1.9e-148 488.0 0.0 1 1 2.5e-150 2.4e-148 487.6 0.0 2 386 172 561 171 561 0.99 # 13818 # 16130 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 1_31 - 880 TrwB_AAD_bind PF10412.4 386 3e-05 16.6 0.2 1 1 8e-07 7.8e-05 15.2 0.0 16 91 482 553 474 569 0.71 # 30825 # 33464 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 2_4 - 900 AAA_11 PF13086.1 236 2.9e-13 43.7 0.2 1 1 1.6e-14 7.8e-13 42.3 0.2 190 233 366 408 246 410 0.79 # 5681 # 8380 # 1 # ID=2_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.446 2_2 - 1051 AAA_11 PF13086.1 236 1e-09 32.2 0.3 1 1 3.5e-11 1.7e-09 31.4 0.3 3 134 427 590 425 647 0.63 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 1_11 - 1754 AAA_11 PF13086.1 236 2.7e-05 17.7 2.7 1 1 2.8e-06 0.00013 15.4 0.0 2 75 971 1041 970 1066 0.81 # 8557 # 13818 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.623 3_16 - 347 AAA_11 PF13086.1 236 0.00027 14.4 0.0 1 1 1.2e-05 0.00056 13.3 0.0 14 42 121 153 95 343 0.73 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 Sigma54_activ_2 PF14532.1 138 0.00077 13.4 0.0 1 1 6.3e-06 0.0012 12.7 0.0 9 64 87 144 84 229 0.70 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_12 - 771 T4SS-DNA_transf PF02534.9 469 2.7e-08 26.6 0.0 1 2 0.08 16 -2.3 0.0 130 199 262 330 253 360 0.69 # 13818 # 16130 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 1_12 - 771 T4SS-DNA_transf PF02534.9 469 2.7e-08 26.6 0.0 2 2 3.3e-10 6.5e-08 25.3 0.0 274 393 392 507 361 559 0.74 # 13818 # 16130 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 2_2 - 1051 ArgK PF03308.11 267 0.00039 13.1 0.0 1 1 4.6e-06 0.00089 11.9 0.0 27 64 438 475 425 478 0.87 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 1_31 - 880 Pox_A32 PF04665.7 241 0.00015 15.0 0.0 1 1 1.5e-06 0.0003 14.0 0.0 6 40 474 508 470 523 0.82 # 30825 # 33464 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 3_7 - 307 Methyltransf_23 PF13489.1 161 0.00084 12.9 0.0 1 1 7.1e-06 0.0014 12.2 0.0 74 115 186 231 80 253 0.63 # 5193 # 6113 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_16 - 347 RNA_helicase PF00910.17 107 3.7e-05 17.7 0.0 1 1 4.5e-07 8.8e-05 16.5 0.0 1 106 127 232 127 233 0.82 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_12 - 137 tRNA_anti-codon PF01336.20 75 7.3e-05 16.5 0.0 1 2 0.023 4.4 1.1 0.0 43 62 61 80 51 83 0.80 # 10149 # 10559 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 3_12 - 137 tRNA_anti-codon PF01336.20 75 7.3e-05 16.5 0.0 2 2 1.9e-06 0.00036 14.2 0.0 3 68 71 129 69 135 0.82 # 10149 # 10559 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 AAA_24 PF13479.1 213 0.0011 12.4 0.1 1 1 3.1e-05 0.003 11.0 0.1 5 23 126 144 124 154 0.84 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 AAA_24 PF13479.1 213 0.0026 11.2 0.1 1 1 6.1e-05 0.0059 10.0 0.1 5 23 103 121 99 127 0.85 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_12 - 137 BOF PF04076.8 103 5.9e-22 71.3 0.3 1 1 4.2e-24 8.1e-22 70.9 0.2 9 102 40 134 29 135 0.85 # 10149 # 10559 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 2_2 - 1051 UvrD-helicase PF00580.16 315 2.5e-07 24.1 1.5 1 1 1.8e-09 3.6e-07 23.6 1.5 12 169 439 613 427 963 0.82 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_1 - 260 NACHT PF05729.7 166 0.00025 14.6 0.0 1 1 2.1e-06 0.0004 13.9 0.0 3 49 104 151 102 200 0.81 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_1 - 260 AAA_25 PF13481.1 194 1.4e-06 21.7 0.1 1 1 8.9e-08 4.3e-06 20.1 0.1 9 60 72 128 68 201 0.77 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_16 - 347 AAA_25 PF13481.1 194 3.8e-05 17.0 0.3 1 1 2.5e-06 0.00012 15.3 0.1 28 56 120 147 97 176 0.83 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 2_2 - 1051 AAA_25 PF13481.1 194 5.1e-05 16.6 0.0 1 1 2.3e-06 0.00011 15.5 0.0 31 98 438 504 424 549 0.66 # 1445 # 4597 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 7_3 - 209 AAA_25 PF13481.1 194 0.00026 14.3 0.1 1 1 1.2e-05 0.0006 13.1 0.0 42 87 10 44 3 90 0.78 # 2544 # 3170 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 3_16 - 347 AAA_28 PF13521.1 163 1.3e-05 19.0 0.1 1 1 3.6e-07 3.5e-05 17.7 0.0 1 51 126 177 126 257 0.86 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 AAA_28 PF13521.1 163 0.00049 13.9 0.0 1 1 1e-05 0.00097 13.0 0.0 1 49 103 156 103 171 0.73 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_16 - 347 AAA_5 PF07728.9 139 3e-06 20.9 3.4 1 1 1.2e-07 1.2e-05 19.0 0.3 2 37 127 162 126 245 0.64 # 16698 # 17738 # -1 # ID=3_16;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.433 3_1 - 260 AAA_5 PF07728.9 139 3.5e-05 17.4 0.0 1 1 9.1e-07 8.9e-05 16.1 0.0 1 74 103 172 103 177 0.80 # 299 # 1078 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d6a4b65f-0281-424b-b10f-242871a09ab7 # Target file: checkm_output/bins/pm202/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm202/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d6a4b65f-0281-424b-b10f-242871a09ab7 checkm_output/bins/pm202/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:49 2020 # [ok]