# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 574 DUF3584 PF12128.3 1201 0.053 -0.0 23.2 1 1 0.0099 0.079 -0.6 23.2 353 502 296 441 290 453 0.61 # 1605 # 3326 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/40e92ae1-7234-4162-bc0c-54f3918da95f # Target file: checkm_output/bins/pm2015/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2015/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/40e92ae1-7234-4162-bc0c-54f3918da95f checkm_output/bins/pm2015/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:45 2020 # [ok]