# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_16 - 358 Mg_chelatase PF01078.16 207 0.00014 14.5 0.0 1 1 1.8e-06 0.00025 13.6 0.0 14 84 19 89 6 102 0.79 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_3 - 188 Methyltransf_12 PF08242.7 99 1.7e-05 18.7 0.0 1 1 2e-07 2.9e-05 18.0 0.0 1 99 55 144 55 144 0.86 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_12 - 228 UPF0020 PF01170.13 180 1.9e-05 17.7 0.0 1 2 0.00029 0.042 6.8 0.0 103 119 17 33 4 88 0.73 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_12 - 228 UPF0020 PF01170.13 180 1.9e-05 17.7 0.0 2 2 6.2e-05 0.0089 9.0 0.0 28 54 163 189 158 221 0.67 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 6_4 - 232 cobW PF02492.14 178 0.00073 12.4 0.0 1 1 1.7e-05 0.0012 11.7 0.0 3 21 39 57 37 80 0.85 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_2 - 341 cobW PF02492.14 178 0.0012 11.8 0.0 1 1 2.8e-05 0.002 11.0 0.0 4 30 5 31 3 53 0.72 # 365 # 1387 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_3 - 188 RrnaAD PF00398.15 262 4.9e-09 28.9 0.0 1 1 4.4e-11 6.3e-09 28.6 0.0 9 113 29 128 24 148 0.89 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 2_16 - 358 ABC_ATPase PF09818.4 448 0.00087 11.3 1.2 1 2 0.0019 0.27 3.1 0.0 240 264 22 47 14 50 0.87 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 ABC_ATPase PF09818.4 448 0.00087 11.3 1.2 2 2 0.00015 0.022 6.7 0.3 378 418 172 212 131 222 0.90 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 Rad17 PF03215.10 519 3.2e-06 19.4 0.0 1 1 3.1e-08 4.4e-06 19.0 0.0 32 96 14 79 8 102 0.79 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_15 - 389 MipZ PF09140.6 261 6.2e-06 18.8 0.4 1 2 3.5e-06 0.00051 12.6 0.0 2 47 108 153 107 157 0.87 # 10541 # 11707 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_15 - 389 MipZ PF09140.6 261 6.2e-06 18.8 0.4 2 2 0.0011 0.16 4.4 0.0 88 134 224 270 197 292 0.84 # 10541 # 11707 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 8_6 - 147 SSB PF00436.20 104 4.6e-27 87.4 0.5 1 1 4.1e-29 5.9e-27 87.1 0.5 26 101 2 80 1 83 0.93 # 4454 # 4894 # -1 # ID=8_6;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.594 1_3 - 188 Methyltransf_18 PF12847.2 112 4.2e-10 33.6 0.0 1 1 6.3e-12 9e-10 32.6 0.0 4 109 53 146 50 148 0.89 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 3_2 - 341 UvrD_C_2 PF13538.1 104 0.00011 15.8 0.0 1 1 1.5e-06 0.00022 14.8 0.0 37 103 247 329 224 330 0.65 # 365 # 1387 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 4_2 - 877 DUF87 PF01935.12 229 2.3e-07 24.3 0.0 1 1 1.4e-08 6.6e-07 22.8 0.0 26 222 482 669 468 676 0.76 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 6_4 - 232 DUF87 PF01935.12 229 0.00032 13.9 0.0 1 2 5.1e-05 0.0024 11.1 0.1 26 44 39 57 21 59 0.91 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 232 DUF87 PF01935.12 229 0.00032 13.9 0.0 2 2 0.081 3.9 0.6 0.0 136 184 128 196 95 215 0.65 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_7 - 107 DUF87 PF01935.12 229 0.00064 13.0 0.0 1 1 2.1e-05 0.001 12.3 0.0 25 50 74 99 72 103 0.91 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 6_4 - 232 NB-ARC PF00931.17 287 0.00087 11.6 0.1 1 1 1.9e-05 0.0014 10.9 0.1 18 37 35 54 24 65 0.87 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 NB-ARC PF00931.17 287 0.0011 11.3 0.0 1 1 3.9e-05 0.0028 9.9 0.0 12 37 20 45 15 49 0.82 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 Septin PF00735.13 281 0.00019 13.9 0.0 1 1 2.5e-06 0.00036 13.0 0.0 7 92 30 117 26 131 0.83 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 AAA_22 PF13401.1 131 2.8e-06 20.9 0.0 1 1 1.4e-07 5.1e-06 20.1 0.0 3 57 26 81 24 189 0.84 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 AAA_22 PF13401.1 131 3.4e-05 17.4 0.7 1 1 6.8e-06 0.00025 14.7 0.7 3 25 35 57 31 207 0.82 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_2 - 341 AAA_22 PF13401.1 131 4.8e-05 16.9 0.0 1 1 9.5e-06 0.00034 14.2 0.0 8 111 5 155 4 167 0.75 # 365 # 1387 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 4_7 - 107 AAA_22 PF13401.1 131 0.0014 12.2 0.0 1 1 6.6e-05 0.0024 11.5 0.0 3 27 71 95 66 103 0.86 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 3_3 - 522 AAA_15 PF13175.1 415 4.8e-17 55.4 0.1 1 2 5.1e-09 2.4e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 522 AAA_15 PF13175.1 415 4.8e-17 55.4 0.1 2 2 5e-11 2.4e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 2_16 - 358 AAA_15 PF13175.1 415 1.2e-06 21.1 0.0 1 2 0.0013 0.062 5.7 0.0 19 42 23 47 5 103 0.80 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 AAA_15 PF13175.1 415 1.2e-06 21.1 0.0 2 2 5e-06 0.00024 13.6 0.0 372 411 152 191 143 193 0.93 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 AAA_15 PF13175.1 415 0.00035 13.1 0.0 1 2 0.00012 0.0058 9.1 0.0 25 46 34 60 9 93 0.72 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 232 AAA_15 PF13175.1 415 0.00035 13.1 0.0 2 2 0.017 0.81 2.0 0.0 372 414 164 205 140 205 0.89 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_12 - 228 N6_N4_Mtase PF01555.13 231 9.1e-37 120.1 0.0 1 2 1.2e-15 1.7e-13 44.0 0.0 1 114 21 124 21 137 0.89 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_12 - 228 N6_N4_Mtase PF01555.13 231 9.1e-37 120.1 0.0 2 2 5.4e-25 7.8e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_16 - 358 AAA_17 PF13207.1 121 9.8e-07 23.1 0.0 1 1 3.2e-08 2.3e-06 21.9 0.0 2 60 30 118 29 182 0.54 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 AAA_17 PF13207.1 121 4e-05 17.9 0.2 1 1 8.7e-07 6.3e-05 17.2 0.2 2 19 39 56 38 219 0.85 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_3 - 522 AAA_21 PF13304.1 303 8.9e-14 45.5 0.1 1 2 2.1e-06 0.0001 15.7 0.0 2 24 27 49 27 76 0.83 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 522 AAA_21 PF13304.1 303 8.9e-14 45.5 0.1 2 2 6.2e-10 3e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 6_4 - 232 AAA_21 PF13304.1 303 3.4e-13 43.6 0.0 1 2 5.6e-06 0.00027 14.3 0.1 1 22 38 59 38 71 0.87 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 232 AAA_21 PF13304.1 303 3.4e-13 43.6 0.0 2 2 9.3e-10 4.5e-08 26.8 0.0 234 301 141 205 134 206 0.96 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 AAA_21 PF13304.1 303 1.3e-10 35.1 0.0 1 2 1.1e-07 5.1e-06 20.0 0.0 1 59 29 96 29 112 0.69 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 AAA_21 PF13304.1 303 1.3e-10 35.1 0.0 2 2 1.3e-05 0.00064 13.1 0.0 234 298 129 191 118 197 0.88 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_12 - 76 ADH_zinc_N_2 PF13602.1 127 2.7e-05 18.5 0.0 1 1 1.9e-07 2.7e-05 18.5 0.0 80 122 26 66 6 71 0.85 # 7793 # 8020 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.592 2_16 - 358 Miro PF08477.8 119 0.00017 15.5 0.0 1 1 2.9e-06 0.00042 14.3 0.0 2 30 30 61 30 93 0.76 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 MobB PF03205.9 140 0.00038 13.6 0.0 1 1 9.6e-06 0.00069 12.8 0.0 3 20 39 56 37 108 0.84 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_2 - 877 MobB PF03205.9 140 0.00089 12.4 0.1 1 1 5.4e-05 0.0039 10.3 0.0 4 37 483 515 481 523 0.79 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 4_13 - 121 CTP_transf_2 PF01467.21 157 0.0012 12.3 0.0 1 1 9.7e-06 0.0014 12.1 0.0 32 64 7 38 2 93 0.70 # 7983 # 8345 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_15 - 389 ArsA_ATPase PF02374.10 305 2.5e-06 20.1 0.4 1 2 1.7e-06 0.00024 13.6 0.1 9 36 115 142 109 151 0.89 # 10541 # 11707 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_15 - 389 ArsA_ATPase PF02374.10 305 2.5e-06 20.1 0.4 2 2 0.0011 0.16 4.3 0.0 123 136 231 244 221 251 0.84 # 10541 # 11707 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 4_7 - 107 T2SE PF00437.15 272 0.0011 11.3 0.0 1 1 8e-06 0.0012 11.2 0.0 107 154 54 98 24 103 0.79 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_7 - 107 Zeta_toxin PF06414.7 201 0.0016 10.9 0.1 1 1 1.7e-05 0.0024 10.4 0.1 14 39 70 95 59 102 0.80 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 3_3 - 522 SMC_N PF02463.14 220 3.6e-11 36.1 0.0 1 2 4.2e-11 2e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 522 SMC_N PF02463.14 220 3.6e-11 36.1 0.0 2 2 0.0071 0.34 3.5 0.0 163 204 281 321 253 330 0.85 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 6_4 - 232 SMC_N PF02463.14 220 4.1e-09 29.4 0.0 1 1 7e-09 3.4e-07 23.1 0.0 24 212 36 216 24 220 0.76 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 SMC_N PF02463.14 220 6.5e-08 25.4 0.2 1 1 2.6e-08 1.2e-06 21.2 0.2 24 209 27 203 16 211 0.66 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_15 - 389 VirC1 PF07015.6 231 9.5e-05 14.9 0.1 1 2 0.00028 0.04 6.3 0.0 4 42 109 147 107 154 0.91 # 10541 # 11707 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_15 - 389 VirC1 PF07015.6 231 9.5e-05 14.9 0.1 2 2 0.0003 0.043 6.2 0.1 84 139 235 290 222 312 0.77 # 10541 # 11707 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_16 - 358 Arch_ATPase PF01637.13 234 0.00034 13.8 0.0 1 1 3.5e-06 0.0005 13.2 0.0 8 39 17 46 11 62 0.80 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 AAA_16 PF13191.1 185 2.7e-07 24.2 0.1 1 1 1.8e-08 6.5e-07 22.9 0.1 14 48 18 50 15 84 0.78 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 AAA_16 PF13191.1 185 8.8e-06 19.2 0.4 1 1 5.6e-07 2e-05 18.0 0.4 18 56 30 69 23 200 0.73 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_7 - 1275 AAA_16 PF13191.1 185 0.00023 14.6 0.0 1 1 1.9e-05 0.00069 13.0 0.0 14 64 46 96 38 111 0.76 # 4006 # 7830 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.414 4_7 - 107 AAA_16 PF13191.1 185 0.00029 14.2 0.1 1 1 1.8e-05 0.00064 13.1 0.1 22 51 70 99 62 104 0.90 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 3_3 - 522 AAA_23 PF13476.1 202 4.8e-12 40.0 0.0 1 1 4.8e-13 2.3e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 6_4 - 232 AAA_23 PF13476.1 202 0.00072 13.3 0.0 1 1 2.1e-05 0.001 12.8 0.0 19 39 36 56 18 94 0.84 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 AAA_23 PF13476.1 202 0.00088 13.0 0.0 1 1 2.8e-05 0.0013 12.4 0.0 14 37 21 45 2 49 0.78 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 AAA_18 PF13238.1 129 3.9e-05 17.4 0.0 1 1 1.8e-06 0.00013 15.7 0.0 1 22 30 51 30 139 0.77 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 AAA_18 PF13238.1 129 6.1e-05 16.8 0.7 1 1 6.1e-06 0.00044 14.0 0.7 1 19 39 57 39 214 0.88 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 232 AAA_13 PF13166.1 712 0.0024 9.7 0.0 1 2 3.4e-05 0.0049 8.7 0.0 20 42 40 62 25 94 0.83 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 232 AAA_13 PF13166.1 712 0.0024 9.7 0.0 2 2 0.093 13 -2.7 0.0 525 570 159 202 155 205 0.87 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_15 - 389 CbiA PF01656.18 195 1.4e-36 119.1 0.0 1 1 1.3e-38 1.9e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 10541 # 11707 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_3 - 188 Methyltransf_25 PF13649.1 101 0.00016 15.5 0.0 1 1 1.7e-06 0.00024 14.9 0.0 1 101 54 142 54 142 0.81 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 6_4 - 232 KaiC PF06745.8 227 0.00069 12.2 0.1 1 1 9.4e-06 0.0014 11.2 0.1 7 35 25 52 22 66 0.88 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 AAA_14 PF13173.1 128 0.00015 15.1 0.0 1 1 5.2e-06 0.00037 13.8 0.0 2 24 27 49 26 90 0.77 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 AAA_14 PF13173.1 128 0.00078 12.8 0.0 1 1 2.5e-05 0.0018 11.6 0.0 2 41 36 75 35 131 0.63 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_3 - 522 AAA_29 PF13555.1 62 1.4e-07 24.5 0.0 1 1 5.6e-09 2.7e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 6_4 - 232 AAA_29 PF13555.1 62 3.9e-06 19.8 0.1 1 1 1.5e-07 7.3e-06 18.9 0.1 16 42 30 55 24 71 0.78 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 AAA_29 PF13555.1 62 1.8e-05 17.7 0.0 1 1 7.6e-07 3.6e-05 16.7 0.0 17 40 22 44 17 48 0.85 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 AAA PF00004.24 132 0.00058 13.5 0.0 1 1 8.2e-06 0.0012 12.5 0.0 1 20 30 49 30 75 0.93 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 MMR_HSR1 PF01926.18 116 0.00027 14.3 0.2 1 1 6.3e-06 0.00046 13.6 0.2 2 20 39 57 38 201 0.91 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 MMR_HSR1 PF01926.18 116 0.00067 13.1 0.0 1 1 1.7e-05 0.0012 12.2 0.0 2 21 30 49 29 84 0.82 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_3 - 188 N6_Mtase PF02384.11 311 0.00022 13.8 0.0 1 2 1.6e-05 0.0024 10.4 0.0 28 64 32 68 21 83 0.87 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_3 - 188 N6_Mtase PF02384.11 311 0.00022 13.8 0.0 2 2 0.018 2.6 0.4 0.0 127 137 114 124 103 134 0.82 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 2_16 - 358 DUF258 PF03193.11 161 2.8e-07 23.3 0.0 1 1 7.1e-09 5.1e-07 22.4 0.0 26 77 17 69 3 83 0.79 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 DUF258 PF03193.11 161 2e-06 20.5 0.0 1 1 4.1e-08 3e-06 19.9 0.0 19 61 19 62 4 91 0.83 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_15 - 389 AAA_31 PF13614.1 157 1.4e-09 31.5 0.0 1 2 1.4e-08 2e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 10541 # 11707 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_15 - 389 AAA_31 PF13614.1 157 1.4e-09 31.5 0.0 2 2 0.00018 0.026 7.9 0.1 110 152 227 268 223 272 0.84 # 10541 # 11707 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 6_4 - 232 NTPase_1 PF03266.10 168 0.00014 15.0 0.1 1 2 3.4e-05 0.005 10.0 0.0 2 44 39 83 38 91 0.80 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 232 NTPase_1 PF03266.10 168 0.00014 15.0 0.1 2 2 0.0042 0.61 3.2 0.0 87 151 153 219 115 230 0.73 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 AAA_33 PF13671.1 143 1.4e-05 18.5 0.4 1 1 6.4e-07 4.6e-05 16.7 0.4 2 22 30 50 29 201 0.70 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 AAA_33 PF13671.1 143 0.00055 13.3 1.4 1 1 6.1e-05 0.0044 10.3 1.4 2 19 39 56 38 214 0.73 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_3 - 188 Methyltransf_26 PF13659.1 117 3.6e-14 46.2 0.0 1 1 9e-16 6.5e-14 45.4 0.0 2 114 52 147 51 150 0.91 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_12 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 38.1 0.0 1 2 4.1e-07 3e-05 17.5 0.0 57 114 7 71 2 74 0.69 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_12 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 38.1 0.0 2 2 1.9e-07 1.4e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 6_4 - 232 AAA_30 PF13604.1 196 0.00015 14.8 0.4 1 1 1.9e-06 0.00027 14.0 0.4 18 58 36 76 29 202 0.87 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_7 - 107 FtsK_SpoIIIE PF01580.13 205 1.8e-06 20.9 0.0 1 1 4.6e-08 2.2e-06 20.7 0.0 9 66 41 100 34 103 0.81 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_2 - 877 FtsK_SpoIIIE PF01580.13 205 2.5e-05 17.2 0.2 1 2 6.1e-06 0.00029 13.7 0.0 39 63 476 504 463 507 0.84 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 4_2 - 877 FtsK_SpoIIIE PF01580.13 205 2.5e-05 17.2 0.2 2 2 0.054 2.6 0.9 0.0 75 166 530 625 529 634 0.75 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 6_4 - 232 FtsK_SpoIIIE PF01580.13 205 0.00019 14.4 0.0 1 1 1.1e-05 0.00055 12.9 0.0 37 60 35 58 14 77 0.81 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_3 - 188 MTS PF05175.9 170 1.3e-09 31.0 0.0 1 1 1.3e-11 1.8e-09 30.6 0.0 31 141 50 149 41 165 0.85 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 3_3 - 522 DUF2813 PF11398.3 373 4.7e-05 16.0 1.2 1 2 4.6e-06 0.00067 12.2 0.0 11 49 12 51 3 56 0.79 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 522 DUF2813 PF11398.3 373 4.7e-05 16.0 1.2 2 2 0.0067 0.96 1.8 0.0 287 333 279 326 250 333 0.82 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_3 - 188 Met_10 PF02475.11 200 0.00074 12.5 0.0 1 1 7e-06 0.001 12.1 0.0 99 189 48 132 38 145 0.78 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 6_4 - 232 ABC_tran PF00005.22 137 3.4e-36 118.0 0.0 1 1 1.4e-37 4.9e-36 117.5 0.0 1 136 26 171 26 172 0.92 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 ABC_tran PF00005.22 137 7.4e-36 116.9 0.0 1 1 4.2e-37 1.5e-35 115.9 0.0 1 136 17 159 17 160 0.90 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 3_3 - 522 ABC_tran PF00005.22 137 0.00023 14.9 0.0 1 1 1.9e-05 0.00068 13.4 0.0 14 113 27 155 17 158 0.73 # 1372 # 2937 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 4_2 - 877 ABC_tran PF00005.22 137 0.0014 12.4 0.0 1 1 0.00012 0.0042 10.8 0.0 13 102 481 610 476 619 0.60 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 2_16 - 358 TIGR03263 TIGR03263 180 8.4e-05 15.4 0.1 1 2 3.1e-06 0.00045 13.0 0.0 2 22 28 48 27 85 0.82 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 TIGR03263 TIGR03263 180 8.4e-05 15.4 0.1 2 2 0.036 5.2 -0.2 0.1 115 152 151 188 135 204 0.81 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 ATP-synt_ab PF00006.20 215 0.00039 13.4 0.1 1 1 8.3e-06 0.0012 11.8 0.1 8 35 29 56 23 74 0.86 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_12 - 228 Cons_hypoth95 PF03602.10 183 1.9e-05 17.5 0.0 1 2 0.00041 0.059 6.1 0.0 112 146 18 54 8 81 0.66 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_12 - 228 Cons_hypoth95 PF03602.10 183 1.9e-05 17.5 0.0 2 2 4e-05 0.0058 9.4 0.0 41 62 162 183 145 218 0.78 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 6_4 - 232 AAA_19 PF13245.1 76 0.00027 14.1 0.1 1 2 1.8e-05 0.0026 11.0 0.0 10 54 36 75 29 87 0.75 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 232 AAA_19 PF13245.1 76 0.00027 14.1 0.1 2 2 0.052 7.4 -0.1 0.0 31 62 182 212 179 227 0.60 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 4_2 - 877 AAA_10 PF12846.2 304 2e-49 162.0 0.1 1 1 9.7e-51 3.5e-49 161.2 0.1 1 299 479 773 479 776 0.90 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 4_7 - 107 AAA_10 PF12846.2 304 1.7e-05 17.7 0.0 1 2 0.0062 0.22 4.3 0.0 272 290 20 42 7 55 0.77 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_7 - 107 AAA_10 PF12846.2 304 1.7e-05 17.7 0.0 2 2 3e-05 0.0011 11.8 0.0 2 24 73 95 72 100 0.87 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 6_4 - 232 AAA_10 PF12846.2 304 1.9e-05 17.6 0.0 1 1 1.3e-06 4.8e-05 16.3 0.0 4 29 39 65 37 85 0.76 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 AAA_10 PF12846.2 304 0.00075 12.4 0.0 1 1 3.4e-05 0.0012 11.7 0.0 4 22 30 48 28 79 0.86 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 SbcCD_C PF13558.1 90 1.2e-05 18.6 0.2 1 1 1.3e-06 0.00019 14.8 0.2 32 89 143 187 126 188 0.76 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_3 - 188 Methyltransf_31 PF13847.1 152 1.2e-06 21.6 0.0 1 1 1e-08 1.4e-06 21.4 0.0 5 118 52 156 48 183 0.84 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 3_2 - 341 Viral_helicase1 PF01443.13 234 9.3e-12 38.3 0.1 1 2 1.9e-07 2.8e-05 17.1 0.0 2 30 5 38 4 59 0.76 # 365 # 1387 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_2 - 341 Viral_helicase1 PF01443.13 234 9.3e-12 38.3 0.1 2 2 7.2e-08 1e-05 18.5 0.1 63 233 133 330 122 331 0.67 # 365 # 1387 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_16 - 358 Adeno_IVa2 PF02456.10 370 0.0015 10.6 0.0 1 1 2.2e-05 0.0032 9.5 0.0 90 116 30 53 5 72 0.75 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 PduV-EutP PF10662.4 143 0.0013 11.7 0.1 1 1 2.1e-05 0.003 10.5 0.0 4 25 30 51 28 68 0.90 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 4_2 - 877 TrwB_AAD_bind PF10412.4 386 1.2e-06 20.7 0.3 1 1 4.8e-08 3.4e-06 19.2 0.0 15 53 479 517 470 547 0.80 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 4_7 - 107 TrwB_AAD_bind PF10412.4 386 0.00021 13.3 0.0 1 2 0.044 3.1 -0.4 0.0 295 335 25 65 17 68 0.74 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_7 - 107 TrwB_AAD_bind PF10412.4 386 0.00021 13.3 0.0 2 2 6.9e-06 0.0005 12.1 0.0 5 42 62 99 58 103 0.88 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_2 - 877 T4SS-DNA_transf PF02534.9 469 5e-06 18.7 0.0 1 2 0.00012 0.017 7.1 0.0 105 186 533 608 475 623 0.88 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 4_2 - 877 T4SS-DNA_transf PF02534.9 469 5e-06 18.7 0.0 2 2 2.3e-05 0.0034 9.4 0.0 319 378 711 769 663 771 0.90 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_3 - 188 TIGR00755 TIGR00755 256 3.6e-09 29.3 0.0 1 1 3.4e-11 4.9e-09 28.9 0.0 8 105 29 123 25 134 0.90 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_12 - 228 MethyltransfD12 PF02086.10 260 0.00055 12.8 0.0 1 2 0.014 1.9 1.2 0.0 173 188 16 31 10 92 0.81 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_12 - 228 MethyltransfD12 PF02086.10 260 0.00055 12.8 0.0 2 2 4e-05 0.0058 9.5 0.0 20 46 163 189 148 197 0.78 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 4_7 - 107 Pox_A32 PF04665.7 241 0.00011 14.9 0.0 1 2 0.03 2.1 0.9 0.0 2 29 41 67 40 71 0.77 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_7 - 107 Pox_A32 PF04665.7 241 0.00011 14.9 0.0 2 2 5.6e-06 0.00041 13.1 0.0 7 42 66 101 60 104 0.89 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_2 - 877 Pox_A32 PF04665.7 241 0.00092 11.9 0.0 1 1 3.7e-05 0.0026 10.4 0.0 6 38 472 504 469 519 0.85 # 154 # 2784 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_3 - 188 Methyltransf_23 PF13489.1 161 8e-05 15.8 0.0 1 1 7.3e-07 0.0001 15.4 0.0 9 125 38 158 27 173 0.78 # 449 # 1012 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 4_7 - 107 RNA_helicase PF00910.17 107 0.00018 15.1 0.0 1 1 5.5e-06 0.00039 14.0 0.0 1 29 75 103 75 106 0.91 # 4056 # 4376 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_16 - 358 RNA_helicase PF00910.17 107 0.00068 13.3 0.0 1 1 2.2e-05 0.0016 12.1 0.0 1 19 30 48 30 73 0.91 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 3_2 - 341 UvrD-helicase PF00580.16 315 1.4e-08 27.7 0.1 1 2 5.9e-06 0.00085 12.0 0.1 16 69 4 49 2 78 0.83 # 365 # 1387 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_2 - 341 UvrD-helicase PF00580.16 315 1.4e-08 27.7 0.1 2 2 2.6e-06 0.00037 13.2 0.0 242 294 115 170 96 174 0.86 # 365 # 1387 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 6_4 - 232 NACHT PF05729.7 166 0.00027 14.0 0.1 1 1 1.7e-05 0.0012 11.9 0.0 3 20 39 56 37 76 0.86 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 NACHT PF05729.7 166 0.0003 13.9 0.1 1 1 8.6e-06 0.00062 12.9 0.1 3 21 30 48 28 50 0.89 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 232 AAA_25 PF13481.1 194 8.7e-06 18.6 0.0 1 2 1e-06 7.4e-05 15.6 0.0 29 58 32 62 14 131 0.78 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 232 AAA_25 PF13481.1 194 8.7e-06 18.6 0.0 2 2 0.034 2.4 0.9 0.0 161 188 175 201 165 206 0.69 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 AAA_25 PF13481.1 194 3e-05 16.9 0.3 1 1 1.7e-06 0.00012 14.9 0.0 30 54 24 48 11 75 0.83 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_12 - 228 Methyltransf_15 PF09445.5 164 0.0011 11.9 0.0 1 2 0.045 6.5 -0.3 0.0 53 79 4 29 2 32 0.90 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_12 - 228 Methyltransf_15 PF09445.5 164 0.0011 11.9 0.0 2 2 4.2e-05 0.0061 9.5 0.0 3 31 166 194 164 209 0.86 # 6733 # 7416 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 6_4 - 232 AAA_28 PF13521.1 163 1.1e-06 22.1 0.1 1 2 1.2e-06 8.4e-05 16.0 0.0 2 21 39 58 38 94 0.79 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 232 AAA_28 PF13521.1 163 1.1e-06 22.1 0.1 2 2 0.0057 0.41 4.0 0.0 19 79 111 168 104 174 0.63 # 1767 # 2462 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_16 - 358 AAA_28 PF13521.1 163 3.9e-05 17.1 0.0 1 1 1e-06 7.2e-05 16.2 0.0 2 22 30 50 29 112 0.79 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 TOBE_2 PF08402.5 75 4.5e-12 39.3 0.1 1 1 7.2e-14 1e-11 38.1 0.1 1 75 270 342 270 342 0.94 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_16 - 358 AAA_5 PF07728.9 139 5.7e-05 16.3 0.2 1 1 9.8e-07 0.00014 15.0 0.0 2 22 30 50 29 69 0.87 # 10747 # 11820 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/535117a9-58b5-456b-b2a7-5b4054d37b7f # Target file: checkm_output/bins/pm2011/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2011/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/535117a9-58b5-456b-b2a7-5b4054d37b7f checkm_output/bins/pm2011/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:43 2020 # [ok]