# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_6 - 501 Methyltransf_12 PF08242.7 99 0.081 2.5 12.3 1 2 0.061 0.37 0.4 0.2 40 75 323 359 310 378 0.77 # 3643 # 5145 # 1 # ID=1_6;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.438 1_6 - 501 Methyltransf_12 PF08242.7 99 0.081 2.5 12.3 2 2 0.0002 0.0012 8.3 0.1 37 98 378 441 366 442 0.76 # 3643 # 5145 # 1 # ID=1_6;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.438 1_5 - 146 AAA_23 PF13476.1 202 0.00015 11.0 7.2 1 1 2.8e-05 0.00017 10.9 7.2 125 196 42 132 16 136 0.56 # 2946 # 3383 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/659a1628-121f-4663-8810-67b6e3629dce # Target file: checkm_output/bins/pm2005/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2005/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/659a1628-121f-4663-8810-67b6e3629dce checkm_output/bins/pm2005/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:39 2020 # [ok]