# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_14 - 260 IstB_IS21 PF01695.12 178 3.7e-73 237.3 0.1 1 2 0.049 4 -0.6 0.0 64 97 25 57 24 61 0.64 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 IstB_IS21 PF01695.12 178 3.7e-73 237.3 0.1 2 2 9.8e-75 7.9e-73 236.2 0.1 1 178 56 235 56 235 0.98 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_39 - 211 MipZ PF09140.6 261 4.9e-09 28.2 0.2 1 3 7.2e-07 5.8e-05 14.8 0.1 5 51 7 53 3 59 0.89 # 33928 # 34560 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.468 1_39 - 211 MipZ PF09140.6 261 4.9e-09 28.2 0.2 2 3 1.2e-05 0.00097 10.8 0.0 88 135 69 116 58 151 0.82 # 33928 # 34560 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.468 1_39 - 211 MipZ PF09140.6 261 4.9e-09 28.2 0.2 3 3 0.066 5.3 -1.4 0.0 206 237 161 193 137 202 0.76 # 33928 # 34560 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.468 1_14 - 260 AAA_22 PF13401.1 131 1.3e-06 21.3 0.2 1 2 4.5e-05 0.0018 11.0 0.0 5 21 103 119 99 131 0.83 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA_22 PF13401.1 131 1.3e-06 21.3 0.2 2 2 0.00073 0.03 7.1 0.0 88 103 154 181 126 203 0.66 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 AAA_22 PF13401.1 131 0.00021 14.0 0.0 1 1 1.3e-05 0.00052 12.8 0.0 6 28 227 249 222 330 0.77 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_69 - 518 AAA_17 PF13207.1 121 1.8e-05 18.2 0.2 1 1 1e-06 8.3e-05 16.0 0.0 1 24 227 255 227 345 0.72 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_34 - 713 AAA_21 PF13304.1 303 1.2e-08 27.8 0.2 1 2 6.8e-06 0.00055 12.5 0.0 7 71 29 106 27 212 0.63 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_34 - 713 AAA_21 PF13304.1 303 1.2e-08 27.8 0.2 2 2 6.5e-06 0.00053 12.6 0.0 219 298 386 487 301 489 0.75 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_39 - 211 ArsA_ATPase PF02374.10 305 0.00023 12.8 1.2 1 2 7.6e-06 0.00062 11.4 0.8 5 32 7 34 1 48 0.85 # 33928 # 34560 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.468 1_39 - 211 ArsA_ATPase PF02374.10 305 0.00023 12.8 1.2 2 2 0.04 3.2 -0.8 0.0 108 134 57 87 35 89 0.66 # 33928 # 34560 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.468 1_14 - 260 PhoH PF02562.11 205 8.5e-08 24.2 0.1 1 1 3.6e-09 2.9e-07 22.5 0.0 11 48 94 131 83 159 0.83 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AFG1_ATPase PF03969.11 362 5.8e-05 14.6 0.2 1 1 2.8e-06 0.00022 12.6 0.2 63 216 103 254 43 259 0.72 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 T2SE PF00437.15 272 1.9e-41 134.3 0.1 1 1 4.8e-43 3.9e-41 133.3 0.0 10 271 97 373 90 374 0.85 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_69 - 518 G-alpha PF00503.15 389 0.00051 11.3 0.0 1 2 0.054 4.4 -1.6 0.0 234 272 70 113 29 117 0.79 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_69 - 518 G-alpha PF00503.15 389 0.00051 11.3 0.0 2 2 1.9e-05 0.0015 9.8 0.0 58 87 225 254 214 325 0.84 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_34 - 713 SMC_N PF02463.14 220 0.00017 13.5 0.0 1 2 0.00049 0.039 5.7 0.0 5 45 3 42 1 50 0.78 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_34 - 713 SMC_N PF02463.14 220 0.00017 13.5 0.0 2 2 0.0005 0.04 5.7 0.0 135 186 243 470 100 500 0.73 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_14 - 260 Arch_ATPase PF01637.13 234 0.00076 11.8 0.1 1 2 3.4e-05 0.0028 9.9 0.0 8 37 90 119 87 140 0.79 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 Arch_ATPase PF01637.13 234 0.00076 11.8 0.1 2 2 0.071 5.7 -0.9 0.0 121 150 167 192 144 203 0.68 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA_16 PF13191.1 185 5.3e-05 15.9 1.1 1 1 5.9e-06 0.00024 13.7 0.1 21 41 99 119 86 151 0.78 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 AAA_16 PF13191.1 185 7.6e-05 15.4 0.0 1 1 6.4e-06 0.00026 13.6 0.0 8 51 213 252 212 301 0.78 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_34 - 713 AAA_23 PF13476.1 202 8.8e-09 28.5 0.1 1 1 6.7e-10 2.7e-08 26.9 0.1 2 177 3 271 2 351 0.67 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_69 - 518 AAA_23 PF13476.1 202 0.0001 15.3 0.2 1 1 9.7e-06 0.00039 13.4 0.0 20 38 226 244 208 249 0.84 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_69 - 518 AAA_18 PF13238.1 129 0.00026 13.9 0.0 1 1 1.1e-05 0.00087 12.2 0.0 1 18 228 245 228 316 0.86 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_34 - 713 AAA_13 PF13166.1 712 4.5e-27 87.3 0.0 1 3 7.6e-12 6.2e-10 30.7 0.0 15 129 20 151 10 169 0.76 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_34 - 713 AAA_13 PF13166.1 712 4.5e-27 87.3 0.0 2 3 3.4e-06 0.00028 12.0 0.0 240 390 195 383 185 393 0.61 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_34 - 713 AAA_13 PF13166.1 712 4.5e-27 87.3 0.0 3 3 6e-15 4.9e-13 40.9 0.0 497 572 417 489 377 510 0.80 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_39 - 211 CbiA PF01656.18 195 5.1e-16 51.2 0.1 1 1 1.5e-17 1.2e-15 50.0 0.1 3 178 7 164 5 180 0.75 # 33928 # 34560 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.468 1_14 - 260 AAA_14 PF13173.1 128 9.6e-07 21.4 0.0 1 1 4.5e-08 1.8e-06 20.5 0.0 2 96 102 203 101 221 0.67 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 AAA_14 PF13173.1 128 0.00063 12.3 0.0 1 1 7.4e-05 0.003 10.1 0.0 5 30 228 254 225 286 0.80 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_69 - 518 AAA_29 PF13555.1 62 2.3e-05 16.5 0.0 1 1 1.1e-06 4.6e-05 15.6 0.0 21 40 224 242 217 254 0.83 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 260 AAA_29 PF13555.1 62 0.0006 12.0 0.0 1 1 2.9e-05 0.0012 11.1 0.0 19 59 98 139 89 141 0.72 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA PF00004.24 132 1.5e-07 24.3 0.0 1 1 9.5e-09 2.6e-07 23.5 0.0 1 74 105 180 105 214 0.77 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 AAA PF00004.24 132 0.0002 14.2 0.1 1 2 0.00098 0.026 7.3 0.0 1 21 228 248 228 278 0.83 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_69 - 518 AAA PF00004.24 132 0.0002 14.2 0.1 2 2 0.051 1.4 1.8 0.0 9 66 442 508 436 515 0.64 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_39 - 211 AAA PF00004.24 132 0.00067 12.5 0.0 1 1 4.3e-05 0.0012 11.7 0.0 8 38 13 55 9 104 0.73 # 33928 # 34560 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.468 1_14 - 260 Bac_DnaA PF00308.13 219 8.7e-10 31.2 0.0 1 1 1.6e-11 1.3e-09 30.6 0.0 37 136 105 202 75 207 0.85 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 Sigma54_activat PF00158.21 168 0.00011 14.3 0.1 1 1 8.2e-06 0.00066 11.8 0.1 18 53 98 133 82 198 0.72 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 DUF258 PF03193.11 161 1e-05 17.3 0.0 1 1 2e-07 1.6e-05 16.8 0.0 21 78 88 157 70 192 0.71 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_55 - 593 TraG-D_C PF12696.2 128 3.1e-07 23.0 0.2 1 1 8e-09 6.5e-07 21.9 0.2 1 90 266 354 266 383 0.82 # 49219 # 50997 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.499 1_39 - 211 AAA_31 PF13614.1 157 7.4e-07 21.8 0.0 1 2 8.4e-07 6.8e-05 15.5 0.0 2 44 4 46 4 61 0.86 # 33928 # 34560 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.468 1_39 - 211 AAA_31 PF13614.1 157 7.4e-07 21.8 0.0 2 2 0.0023 0.18 4.3 0.0 112 151 72 112 57 117 0.82 # 33928 # 34560 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.468 1_14 - 260 NTPase_1 PF03266.10 168 0.00019 13.8 0.1 1 2 0.0016 0.13 4.5 0.1 2 30 105 133 104 153 0.83 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 NTPase_1 PF03266.10 168 0.00019 13.8 0.1 2 2 0.00025 0.02 7.2 0.0 88 112 157 181 144 204 0.72 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 AAA_30 PF13604.1 196 0.00026 13.2 0.0 1 1 5.8e-06 0.00047 12.4 0.0 4 44 211 251 209 276 0.84 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_59 - 195 DNA_pol3_delta PF06144.8 172 1.7e-06 20.3 0.0 1 1 3e-08 2.4e-06 19.7 0.0 35 99 92 152 74 179 0.80 # 53326 # 53910 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.403 1_34 - 713 ABC_tran PF00005.22 137 2.5e-07 23.7 0.5 1 2 0.001 0.028 7.3 1.2 19 37 29 47 16 174 0.64 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_34 - 713 ABC_tran PF00005.22 137 2.5e-07 23.7 0.5 2 2 4.6e-05 0.0012 11.7 0.0 87 136 398 452 283 453 0.74 # 28624 # 30762 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.501 1_69 - 518 ABC_tran PF00005.22 137 6.1e-05 16.0 0.0 1 1 8e-06 0.00022 14.2 0.0 12 37 226 251 217 288 0.81 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 260 ABC_tran PF00005.22 137 0.00012 15.0 0.3 1 1 3.6e-05 0.00097 12.1 0.0 8 30 99 121 93 136 0.86 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 DAP3 PF10236.4 309 0.00051 11.6 0.0 1 1 1.2e-05 0.00097 10.7 0.0 21 42 223 244 215 253 0.86 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 260 RuvB_N PF05496.7 234 0.0003 12.5 0.0 1 1 6.5e-06 0.00052 11.7 0.0 50 119 102 182 92 190 0.65 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 AAA_19 PF13245.1 76 7.7e-05 15.1 0.0 1 1 5.3e-06 0.00021 13.7 0.0 10 46 226 259 218 268 0.79 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 260 AAA_19 PF13245.1 76 0.00034 13.0 0.0 1 1 2.1e-05 0.00085 11.7 0.0 10 37 103 129 96 154 0.81 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA_10 PF12846.2 304 6.4e-06 18.3 0.7 1 3 0.055 2.2 0.1 0.0 127 169 38 82 8 95 0.68 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA_10 PF12846.2 304 6.4e-06 18.3 0.7 2 3 1.9e-06 7.7e-05 14.8 0.1 1 33 102 134 102 171 0.89 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA_10 PF12846.2 304 6.4e-06 18.3 0.7 3 3 0.048 2 0.3 0.0 202 247 142 192 134 202 0.68 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 AAA_10 PF12846.2 304 0.00018 13.6 0.0 1 1 8.4e-06 0.00034 12.7 0.0 4 30 228 256 226 320 0.81 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 260 ResIII PF04851.10 184 0.0003 13.3 0.0 1 2 6.9e-05 0.0055 9.1 0.0 8 50 89 127 49 135 0.78 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 ResIII PF04851.10 184 0.0003 13.3 0.0 2 2 0.0088 0.71 2.3 0.0 112 163 131 181 127 202 0.72 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_51 - 283 Methyltransf_27 PF13708.1 194 7.5e-67 217.2 0.0 1 1 1.3e-68 1e-66 216.7 0.0 2 194 85 278 84 278 0.96 # 44637 # 45485 # 1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA_25 PF13481.1 194 2e-05 16.6 0.0 1 1 8.3e-07 3.4e-05 15.9 0.0 22 58 90 127 71 183 0.79 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_69 - 518 AAA_25 PF13481.1 194 0.00023 13.2 0.1 1 2 8.7e-05 0.0035 9.3 0.0 25 65 217 260 200 270 0.72 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_69 - 518 AAA_25 PF13481.1 194 0.00023 13.2 0.1 2 2 0.039 1.6 0.7 0.0 153 190 297 337 292 340 0.74 # 62896 # 64449 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_14 - 260 AAA_28 PF13521.1 163 0.00096 11.7 1.8 1 2 0.063 5.1 -0.4 0.1 84 110 35 63 3 82 0.67 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA_28 PF13521.1 163 0.00096 11.7 1.8 2 2 3e-05 0.0024 10.4 0.2 1 43 104 151 104 172 0.70 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA_5 PF07728.9 139 2.4e-05 16.7 0.3 1 2 3.6e-06 0.00029 13.2 0.2 1 74 104 173 104 180 0.72 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 1_14 - 260 AAA_5 PF07728.9 139 2.4e-05 16.7 0.3 2 2 0.053 4.3 -0.3 0.0 90 123 225 258 218 259 0.63 # 13146 # 13925 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.506 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/03932177-c23d-4e5b-8fd2-9ed83b26fd58 # Target file: checkm_output/bins/pm1996/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1996/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/03932177-c23d-4e5b-8fd2-9ed83b26fd58 checkm_output/bins/pm1996/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:34 2020 # [ok]