# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 144 DAO PF01266.19 358 1.4e-06 16.6 0.2 1 1 2e-07 1.6e-06 16.5 0.2 87 161 45 120 4 122 0.85 # 2 # 433 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.572 1_4 - 288 AAA_25 PF13481.1 194 1e-43 138.3 0.1 1 1 1.9e-44 1.5e-43 137.7 0.1 15 193 9 183 4 184 0.90 # 3818 # 4681 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/c195dcfa-84af-4755-acbe-1485f4042291 # Target file: checkm_output/bins/pm1994/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1994/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c195dcfa-84af-4755-acbe-1485f4042291 checkm_output/bins/pm1994/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:31 2020 # [ok]